CF417783

Overview
NameCF417783
Unique NameCF417783
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length675
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417783 vs. ExPASy Swiss-Prot
Match: CP3A5_HUMAN (Cytochrome P450 3A5 OS=Homo sapiens GN=CYP3A5 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.982e-11
Identity = 38/123 (30.89%), Postives = 67/123 (54.47%), Query Frame = 3
Query:  126 EEAEVGGYYIPAKSRVMINAWAIGRDPTAWEDPDTFRPSRFLKEGVPDFKGNNFEFIPFGSGRRSCPGMQLGLYALELAVVHLLHCFKWDLPDGMKPSELDMS-DVFGLTAPRASXLIAVPSK 491
            ++ E+ G +IP  S V+I  +A+  DP  W +P+ FRP RF K+       + + + PFG+G R+C GM+  L  ++LA++ +L  F +      K +++ +  D  GL  P    ++ V S+
Sbjct:  379 KDVEINGVFIPKGSMVVIPTYALHHDPKYWTEPEEFRPERFSKK---KDSIDPYIYTPFGTGPRNCIGMRFALMNMKLALIRVLQNFSF---KPCKETQIPLKLDTQGLLQPEKPIVLKVDSR 495          
BLAST of CF417783 vs. ExPASy Swiss-Prot
Match: CP1A1_BALAC (Cytochrome P450 1A1 OS=Balaenoptera acutorostrata GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.982e-11
Identity = 38/115 (33.04%), Postives = 57/115 (49.57%), Query Frame = 3
Query:  120 TAEEAEVGGYYIPAKSRVMINAWAIGRDPTAWEDPDTFRPSRFLKEGVPDFKGNNFEFIPFGSGRRSCPGMQLGLYALELAVVHLLHCFKWDLPDGMKPSELDMSDVFGLTAPRA 464
            T  +  + G+YIP    V +N W I  D   W+DP  F P RFL       K  + + I FG G+R C G  +  + + L +  LL   ++ +  G+K   +DM+ V+GLT   A
Sbjct:  394 TTRDTSLNGFYIPKGRCVFVNQWQINHDQKLWDDPSAFWPERFLTADGTINKALSEKVILFGLGKRKCIGETIARWEVFLFLAILLQQVEFRVTPGVK---VDMTPVYGLTMKHA 505          
BLAST of CF417783 vs. ExPASy Swiss-Prot
Match: CP3AV_MESAU (Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CYP3A31 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11
Identity = 32/87 (36.78%), Postives = 52/87 (59.77%), Query Frame = 3
Query:  126 EEAEVGGYYIPAKSRVMINAWAIGRDPTAWEDPDTFRPSRFLKEGVPDFKGNNFEFIPFGSGRRSCPGMQLGLYALELAVVHLLHCF 386
            ++ E+ G ++P  S VM+  +A+  DP  W +P+ FRP RF KE       + + F+PFG+G R+C GM+  L  ++LA+  +L  F
Sbjct:  377 QDVEMDGVFVPKGSIVMVPVFALHYDPQYWPEPEKFRPERFSKENKGSI--DPYIFLPFGNGPRNCIGMRFALMNMKLALTKVLQNF 461          
BLAST of CF417783 vs. ExPASy Swiss-Prot
Match: CP3AC_CANFA (Cytochrome P450 3A12 OS=Canis familiaris GN=CYP3A12 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11
Identity = 29/89 (32.58%), Postives = 54/89 (60.67%), Query Frame = 3
Query:  126 EEAEVGGYYIPAKSRVMINAWAIGRDPTAWEDPDTFRPSRFLKEGVPDFKGNNFEFIPFGSGRRSCPGMQLGLYALELAVVHLLHCFKW 392
            ++ E+ G +IP  + VM+  + + RD + W +P+ FRP RF ++       N + ++PFG+G R+C GM+  +  ++LA+V +L  F +
Sbjct:  379 KDVEISGVFIPKGTVVMVPTFTLHRDQSLWPEPEEFRPERFSRKNKDSI--NPYTYLPFGTGPRNCIGMRFAIMNMKLALVRVLQNFSF 465          
BLAST of CF417783 vs. ExPASy Swiss-Prot
Match: CP2DI_RAT (Cytochrome P450 2D18 OS=Rattus norvegicus GN=Cyp2d18 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11
Identity = 48/128 (37.50%), Postives = 66/128 (51.56%), Query Frame = 3
Query:  117 ETAEEAEVGGYYIPAKSRVMINAWAIGRDPTAWEDPDTFRPSRFLKEGVPDFKGN---NFEFIPFGSGRRSCPGMQLGLYALELAVVHLLHCFKWDLPDGM-KPSELDMSDVFG-LTAPRASXLIAVP 485
            +T+ + EV G+ IP  + ++IN  ++ +D T WE P  F P  FL     D +GN   +  F+PF +GRR+C G  L    L L    LL  F + +P G  +PS      VFG LT PR   L A P
Sbjct:  380 KTSRDIEVQGFLIPKGTTLIINLSSVLKDETVWEKPLRFHPEHFL-----DAQGNFVKHEAFMPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSVPAGQPRPSNY---GVFGALTTPRPYQLCASP 499          
BLAST of CF417783 vs. ExPASy Swiss-Prot
Match: CP1A1_CANFA (Cytochrome P450 1A1 OS=Canis familiaris GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11
Identity = 37/115 (32.17%), Postives = 57/115 (49.57%), Query Frame = 3
Query:  120 TAEEAEVGGYYIPAKSRVMINAWAIGRDPTAWEDPDTFRPSRFLKEGVPDFKGNNFEFIPFGSGRRSCPGMQLGLYALELAVVHLLHCFKWDLPDGMKPSELDMSDVFGLTAPRA 464
            T  +  + G+YIP    V +N W I  D   W +P  F+P RFL       K  + + I FG G+R C G  +    + L +  LL   ++ +P+G K   +DM+ ++GLT   A
Sbjct:  394 TTRDTSLSGFYIPKGRCVFVNQWQINHDQKLWGNPSEFQPERFLTLDGTINKALSEKVILFGLGKRKCIGETIARLEVFLFLAILLQQVEFSVPEGTK---VDMTPIYGLTMKHA 505          
BLAST of CF417783 vs. ExPASy Swiss-Prot
Match: C77A2_SOLME (Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77A2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11
Identity = 39/134 (29.10%), Postives = 59/134 (44.03%), Query Frame = 3
Query:   21 RVEESDFDKLTXXKCTLKXTXXXXXXXXXXXXETAEE-AEVGGYYIPAKSRVMINAWAIGRDPTAWEDPDTFRPSRFL--KEGVPDFKGNNFEFIPFGSGRRSCPGMQLGLYALELAVVHLLHCFKWDLPDGMK 413
            +++E D +K+      +K                  E A++GGY IP    V I    I  DP  W +P+ F P RF   KE       +  + IPFG GRR CPG+ +    + L +  L+  F+W  P+  +
Sbjct:  353 KIDEKDIEKMPYLNAVVKELLRKHPPTYMSLTHAVTEPAKLGGYDIPTGVNVEIFLPGISDDPNLWSEPEKFDPDRFYLGKEDADITGVSGVKMIPFGMGRRICPGLNMATVHVSLMLARLVQEFEWADPENTR 486          
The following BLAST results are available for this feature:
BLAST of CF417783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
CP3A5_HUMAN5.982e-1130.89Cytochrome P450 3A5 OS=Homo sapiens GN=CYP3A5 PE=1... [more]
CP1A1_BALAC5.982e-1133.04Cytochrome P450 1A1 OS=Balaenoptera acutorostrata ... [more]
CP3AV_MESAU7.813e-1136.78Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CY... [more]
CP3AC_CANFA7.813e-1132.58Cytochrome P450 3A12 OS=Canis familiaris GN=CYP3A1... [more]
CP2DI_RAT7.813e-1137.50Cytochrome P450 2D18 OS=Rattus norvegicus GN=Cyp2d... [more]
CP1A1_CANFA7.813e-1132.17Cytochrome P450 1A1 OS=Canis familiaris GN=CYP1A1 ... [more]
C77A2_SOLME7.813e-1129.10Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-713 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-010_B04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417783 ID=CF417783; Name=CF417783; organism=Citrus sinensis; type=EST; length=675bp
ACGTGGTTGGCCTCCACCGCCGAGTCGAAGAATCTGACTTTGATAAGTTG
ACGNANNTAAAATGCACACTTAAANAAACCTTAAGACTTCACCCACCAAT
CCCTCTGCTTCTTCACGAGACCGCCGAGGAGGCCGAGGTTGGCGGCTATT
ACATCCCGGCGAAATCGCGTGTTATGATCAACGCGTGGGCTATCGGTAGG
GATCCAACTGCTTGGGAAGATCCTGATACGTTTAGGCCATCGAGGTTCTT
GAAAGAAGGCGTGCCTGATTTTAAAGGAAATAATTTCGAGTTTATACCGT
TCGGATCGGGTCGGAGGTCTTGTCCGGGTATGCAACTCGGGTTATATGCG
CTTGAATTGGCTGTGGTTCATTTGCTTCACTGTTTCAAGTGGGATTTGCC
TGATGGAATGAAACCTAGTGAGCTTGACATGAGTGATGTGTTTGGACTCA
CTGCGCCNAGAGCGAGTCNACTCATTGCCGTACCCAGTAAACGCCTGATC
TGTCCTCTTTGAACCAAAACCAAGAGTGAGCTGAATTGCATGAAAGATTT
TATTTACGTAACNATACATAGGAGGGGACAGCTGAATTGNTATTGCACGC
CCTTTTTGTTTTTAAAATCTTTNGGGGGNAGAAAAAAGGGCAAATAAATA
TCGGGAGAAAAACCAGATAATGACT
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