CF417789

Overview
NameCF417789
Unique NameCF417789
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.477e-21
Identity = 59/180 (32.78%), Postives = 99/180 (55.00%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEVLRQEVELAPHPNSDWIVDSTEN 542
            LL EEFEA + DFGL++     +    T V GT G++ PEY  T   S K+DV+ +G++LLE+I+GQ   DL+R    ++  +++W             VDP+L  +Y  +   +++++A+ C   +  +RP MS+VV +L  +   E  ++W+K     QEV+L+       +VD+  N
Sbjct:  691 LLSEEFEAKIADFGLSRSFLIGNEAQPTVVAGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVIDLSR----ENCNIVEWTSFILENGDIESIVDPNLHQDYDTSSAWKVVELAMSCVNRTSKERPNMSQVVHVL--NECLETCEKWRK----SQEVDLSSPLELSIVVDTEIN 860          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.519e-21
Identity = 54/145 (37.24%), Postives = 89/145 (61.38%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAE-VEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 434
            LLD   EA V DFGLAKL++ +++H TT V GT G++APEY+ +G+++EKTDV+ +G+++LE+++G+   D + +  +    ++ W+            V  DL    VE E ++ L+ +A  C   SP +RP M  VV++LE +
Sbjct:  434 LLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFI--EKGFNIVGWLNFLISENRAKEIV--DLSCEGVERESLDALLSIATKCVSSSPDERPTMHRVVQLLESE 574          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.208e-21
Identity = 54/140 (38.57%), Postives = 80/140 (57.14%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDY--KDTHXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVV 416
            LLDEEF+A + DFGL++        +  +T V GT+G++ PEY  T + SEK+DV+ +GI+LLE+IT QR  D  R    ++  + +WV            VDP L  NY    V + ++VA+ C   S + RP MS+V+
Sbjct:  698 LLDEEFKAKIADFGLSRSFQVGGDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQRVIDQTR----ENPNIAEWVTFVIKKGDTSQIVDPKLHGNYDTHSVWRALEVAMSCANPSSVKRPNMSQVI 833          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.229e-20
Identity = 58/150 (38.67%), Postives = 88/150 (58.67%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVE-AEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAER 449
            LLD++ EA + DFG+AK +    +H +T V GTIG+I PEY  T + +EK+DV+ YGI+LLEL+T ++A        DD+  L   +             DPD+ +   +   V+++ Q+ALLCT+  P DRP M +V R+L    L+E+
Sbjct:  780 LLDKDLEARLTDFGIAKSLCVSKSHTSTYVMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTRRKAV-------DDESNLHHLIMSKTGNNEVMEMADPDITSTCKDLGVVKKVFQLALLCTKRQPNDRPTMHQVTRVLGSFMLSEQ 922          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.739e-20
Identity = 55/144 (38.19%), Postives = 74/144 (51.39%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 434
            L++++    +GDFGLA+L +      TT V GTIG++APE    GKSS  +DVF +G++LLE+++G+R  D           L DWV            VDP L   Y   E    + V LLC    P  RP M  V+R L GD
Sbjct:  497 LIEDDMNPRLGDFGLARLYERGSQSNTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRPTD------SGTFFLADWVMELHARGEILHAVDPRLGFGYDGVEARLALVVGLLCCHQRPTSRPSMRTVLRYLNGD 634          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.102e-20
Identity = 55/145 (37.93%), Postives = 85/145 (58.62%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTA---VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 428
            LLDEE+   + DFGLAK++         +   V+GT+G+IAPEY  T K +EK+DV+ +G++L+EL+TG++  +     N+D VM +  V            +D  +++ Y E +  +++ +ALLCT  SP  RP M  VV MLE
Sbjct:  821 LLDEEWRPRIADFGLAKIIQADSVQRDFSAPLVKGTLGYIAPEYAYTTKVNEKSDVYSFGVVLMELVTGKKPLETDFGENNDIVMWVWSVSKETNREMMMKLIDTSIEDEYKE-DALKVLTIALLCTDKSPQARPFMKSVVSMLE 964          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.969e-20
Identity = 51/142 (35.92%), Postives = 79/142 (55.63%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 428
            LLD  + A + DFGL+KL+    +H TT V GT G++APEY  T + SEK DV+ YGI+LLELI+ +RA D +  ++++   ++ W                 L       ++ +++ +AL CT  S   RP M + VR+L+
Sbjct:  392 LLDNNYNAYLSDFGLSKLLGTSQSHVTTGVAGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELISDKRALDPSFSSHENGFNIVSWAHMMLSQGKAKEVFTTGLWETGPPDDLVEVLHLALKCTVDSLSIRPTMKQAVRLLK 533          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.969e-20
Identity = 55/154 (35.71%), Postives = 77/154 (50.00%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD-GLAERWDEW 461
            L+D +    +GDFGLA+L +      TT V GTIG++APE    G SS  +DVF +G++LLE+++G++  D           + DWV            +DP L + Y E E    + V LLC    P  RP M  V+R L  D  + E  D W
Sbjct:  498 LIDSDMNPRLGDFGLARLYERGSQSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGRKPTD------SGTFFIADWVMELQASGEILSAIDPRLGSGYDEGEARLALAVGLLCCHHKPESRPLMRMVLRYLNRDEDVPEIHDNW 645          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.041e-19
Identity = 58/149 (38.93%), Postives = 84/149 (56.38%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXV-DPDL---QNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDG 437
            L+DE FEA VGDFGLAK++D   +   +AV G+ G+IAPEY  T K +EK D++ +G++LLEL+TG+          D    L  W             + DP L   +++ +   +  + ++A+LCT+ SP DRP M EVV ML   G
Sbjct:  959 LIDENFEAHVGDFGLAKVIDMPLSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQPLEQGGD----LATWTRNHIRDHSLTSEILDPYLTKVEDDVILNHMITVTKIAVLCTKSSPSDRPTMREVVLMLIESG 1103          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.041e-19
Identity = 57/163 (34.97%), Postives = 81/163 (49.69%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG-DGLAERWDEWQKVEVLRQE 488
            L+D +    +GDFGLA+L +      TTA+ GTIG++APE    G  S  +DVF +G++LLE++ G++  D           L+DWV            +DP L + Y   E    + V LLC    P  RP M  V+R L G + + E  DEW   +  R E
Sbjct:  501 LIDSKMNPRLGDFGLARLYERGTLSETTALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGRKPTD------SGTFFLVDWVMELHANGEILSAIDPRLGSGYDGGEARLALAVGLLCCHQKPASRPSMRIVLRYLNGEENVPEIDDEWGYSKSSRSE 657          
The following BLAST results are available for this feature:
BLAST of CF417789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
Y1755_ARATH2.477e-2132.78Probable LRR receptor-like serine/threonine-protei... [more]
FEI2_ARATH5.519e-2137.24LRR receptor-like serine/threonine-protein kinase ... [more]
MEE39_ARATH7.208e-2138.57Probable LRR receptor-like serine/threonine-protei... [more]
ERECT_ARATH1.229e-2038.67LRR receptor-like serine/threonine-protein kinase ... [more]
LRKA2_ARATH2.739e-2038.19Lectin-domain containing receptor kinase A4.2 OS=A... [more]
IKU2_ARATH6.102e-2037.93Receptor-like protein kinase HAIKU2 OS=Arabidopsis... [more]
RPK1_ARATH7.969e-2035.92Probable LRR receptor-like serine/threonine-protei... [more]
LRKA3_ARATH7.969e-2035.71Lectin-domain containing receptor kinase A4.3 OS=A... [more]
Y2317_ARATH1.041e-1938.93Probable leucine-rich repeat receptor-like protein... [more]
LRKA1_ARATH1.041e-1934.97Lectin-domain containing receptor kinase A4.1 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-719 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-010_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417789 ID=CF417789; Name=CF417789; organism=Citrus sinensis; type=EST; length=723bp
TTTTGTTGGATGAGGAGTTTGAAGCTGTTGTTGGGGACTTTGGGTTGGCT
AAACTTATGGACTACAAGGATACCCATGNCACTACGGCAGTCCGTGGCAC
CATTGGGCATATAGCTCCAGAATACCTTTCTACTGGAAAATCTTCAGAGA
AAACTGATGTCTTTGGTTATGGGATTATGCTTCTAGAGCTAATCACTGGA
CAGAGAGCCTTTGATCTTGCTCGTCTTGCAAATGATGATGATGTCATGCT
GCTTGATTGGGTGAAAGGACTTCTGAAGGAAAAGAAGTTAGAAATGCTAG
TTGACCCTGATCTCCAGAACAATTATGTGGAAGCTGAGGTGGAGCAACTT
ATCCAGGTTGCGTTGCTCTGCACTCAAGGCTCCCCTATGGACCGGCCCAA
GATGTCGGAAGTTGTTAGAATGCTTGAAGGTGATGGCTTGGCAGAGCGGT
GGGATGAGTGGCAAAAGGTGGAAGTTCTCCGCCAAGAAGTAGAATTAGCC
CCTCATCCTAATTCAGATTGGATAGTTGACTCAACAGAAAATCTTCATGC
CGTTGAGTTATCTGGTCCAAGGTGACCCTGTCACTCCTATTAGCTATAAG
TAAAGAGGAAAATTTACTACTTTTTTTTATTCCTTTTTTTAATCATAATT
TTTCTTCTTTTTTTAATTTAACGATGATATCCTGATTTCTGTAAGCCCTT
CAGCATTGTATTCATTACACTTG
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