CF417789

Overview
NameCF417789
Unique NameCF417789
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17
Identity = 52/167 (31.14%), Postives = 94/167 (56.29%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKD-THXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVV----RMLEGDGLAERWDEWQKVEVLRQE 488
            LL++  EA + DFGL+K+    D +H  TAV GT G++ PEY +T K +EK+DV+ +GI+LLELITG+R+  + +  + + + ++ +V            VDP L  ++      + ++VA+ C +    +RP  +++V    + L  +   E     +K EV++++
Sbjct:  711 LLNDNLEAKIADFGLSKVFPEDDLSHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGKRS--IMKTDDGEKMNVVHYVEPFLKMGDIDGVVDPRLHGDFSSNSAWKFVEVAMSCVRDRGTNRPNTNQIVSDLKQCLAAELAREPKSNHEKKEVVKEK 875          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17
Identity = 49/143 (34.27%), Postives = 77/143 (53.85%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKD-THXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 428
            LLD++ +A + DFGL++     D +H +T V GT G++  EY  T + SEK+DV+ +G++LLE+IT +   D     N D   + +WV            +DP LQ  Y      + +++A+ C   S + RP MS VV  L+
Sbjct:  699 LLDDQLQAKLADFGLSRSFPIGDESHVSTLVAGTFGYLDHEYYQTNRLSEKSDVYSFGVVLLEIITNKPVID----HNRDMPHIAEWVKLMLTRGDISNIMDPKLQGVYDSGSAWKALELAMTCVNPSSLKRPNMSHVVHELK 837          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17
Identity = 57/150 (38.00%), Postives = 85/150 (56.67%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWV-----XXXXXXXXXXXXVDPDLQNNYVEAEV-EQLIQV---ALLCTQGSPMDRPKMSEVVRML 425
            L+D + E  +GDFGLA+++D   T  T  V GT G+IAPE       S+++DV+ YG++LLEL+TG+RA D    +  +D+ ++ WV                 VDP L +  ++ ++ EQ IQV   AL CT   P +RP M +VV+ L
Sbjct:  928 LMDSDMEPHIGDFGLARILD-DSTVSTATVTGTTGYIAPENAYKTVRSKESDVYSYGVVLLELVTGKRALD---RSFPEDINIVSWVRSVLSSYEDEDDTAGPIVDPKLVDELLDTKLREQAIQVTDLALRCTDKRPENRPSMRDVVKDL 1073          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17
Identity = 57/144 (39.58%), Postives = 82/144 (56.94%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKD-THXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXV-DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 428
            LLD E+ A + DFGLAK     D +H +T V GT G+ APEYL+TG  + K+DV+ +G++LLEL++G+RA D  R + + +  L++W             V D  LQ+ Y   E  ++  ++L C       RP MSEVV  LE
Sbjct:  210 LLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERN--LVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLE 351          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.834e-17
Identity = 54/144 (37.50%), Postives = 82/144 (56.94%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLM-DYKDTHXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPD-LQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 428
            LLDE   A V DFGL+KL+ D +  H TT V+GT+G++ PEY  T + +EK+DV+G+G+++LEL+TG+   D       +    +D              +D   +QN+      E+ + VAL C +   ++RP MSEVV+ LE
Sbjct:  765 LLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPIDRGSYVVKEVKKKMD---KSRNLYDLQELLDTTIIQNSGNLKGFEKYVDVALQCVEPEGVNRPTMSEVVQELE 905          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.834e-17
Identity = 48/145 (33.10%), Postives = 79/145 (54.48%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDG 437
            LLDE+F+A V D+GL KL+  +D+  ++   G  G++APEY ST  +S   DV+G+GI+LLE++TGQ+   +          L++WV            +D  +     + E+ Q++++A  C    P +RP M +V   L+  G
Sbjct:  423 LLDEDFDARVIDYGLGKLVSSQDSKDSSFSNGKFGYVAPEYSSTMVASLSGDVYGFGIVLLEIVTGQKPVLINNGEEGFKESLVEWVSKHLSNGRSKDAIDRRIFGKGYDDEIMQVLRIACSCVVSRPKERPLMIQVYESLKNLG 567          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.834e-17
Identity = 54/148 (36.49%), Postives = 78/148 (52.70%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDY---KDTHXTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNY-VEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 434
            LLD+     + DFG+AKL D      T  T+ V GT G++APEY  +G+ S KTDVF +G+++LE+I G++  +      D  + LL +V            VDP L     V  E+ + I + LLC Q +   RP M+ VV ML  +
Sbjct:  476 LLDDAMNPKIADFGMAKLFDTDQTSQTRFTSKVAGTYGYMAPEYAMSGEFSVKTDVFSFGVLVLEIIKGKK--NNWSPEEDSSLFLLSYVWKSWREGEVLNIVDPSLVETIGVSDEIMKCIHIGLLCVQENAESRPTMASVVVMLNAN 621          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.834e-17
Identity = 51/143 (35.66%), Postives = 78/143 (54.55%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM-LLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 425
            LLD +    V DFG+A++     T   T  V GT G++APEY   G+ S K+DV+ +G+++ E+I+G +   L ++  DD V  L+ +             VDP   +NY   ++ + I +ALLC Q    DRP MS +V+ML
Sbjct:  640 LLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGQFSMKSDVYSFGVLVFEIISGMKNSSLYQM--DDSVSNLVTYTWRLWSNGSQLDLVDPSFGDNYQTHDITRCIHIALLCVQEDVDDRPNMSAIVQML 780          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: Y3804_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.702e-17
Identity = 49/145 (33.79%), Postives = 84/145 (57.93%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKD--THXTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 428
            LLDE+    + DFGL++L+  +D  T      +  +G++APE      + +EK DV+G+G+++LEL+TG+R  +      D  V+L D V            +DP ++  Y E EV  ++++AL+CT   P +RP M+E+V++L+
Sbjct:  861 LLDEKNNPKISDFGLSRLLTTQDGNTMNNNRFQNALGYVAPELECQNLRVNEKCDVYGFGVLILELVTGRRPVEYGE---DSFVILSDHVRVMLEQGNVLECIDPVMEEQYSEDEVLPVLKLALVCTSQIPSNRPTMAEIVQILQ 1002          
BLAST of CF417789 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.702e-17
Identity = 51/143 (35.66%), Postives = 81/143 (56.64%), Query Frame = 3
Query:    3 LLDEEFEAVVGDFGLAKLMDYKDTHXTTA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDV-MLLDWVXXXXXXXXXXXXVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 425
            LLD +    + DFG+A+      T  TT  V GT G++ PEY++ G+ S K+DV+ +G+++LE+I G+++     +  D  V  L+ +V            VDP +  +Y + EV + I ++LLC Q +P DRP MS V +ML
Sbjct:  467 LLDVDMNPKIADFGVARNFRVDQTEATTGRVVGTFGYMPPEYVANGQFSMKSDVYSFGVLILEIIVGKKSSSFHEI--DGSVGNLVTYVWRLWNNESFLELVDPAMGESYDKDEVIRCIHISLLCVQENPADRPTMSTVFQML 607          
The following BLAST results are available for this feature:
BLAST of CF417789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
Y4291_ARATH2.170e-1731.14Probable LRR receptor-like serine/threonine-protei... [more]
Y1756_ARATH2.170e-1734.27Probable LRR receptor-like serine/threonine-protei... [more]
PEPR2_ARATH2.170e-1738.00Leucine-rich repeat receptor-like protein kinase P... [more]
APK1A_ARATH2.170e-1739.58Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
Y5977_ARATH2.834e-1737.50Probable leucine-rich repeat receptor-like protein... [more]
Y1699_ARATH2.834e-1733.10Probable LRR receptor-like serine/threonine-protei... [more]
CRK41_ARATH2.834e-1736.49Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK23_ARATH2.834e-1735.66Putative cysteine-rich receptor-like protein kinas... [more]
Y3804_ARATH3.702e-1733.79Probably inactive leucine-rich repeat receptor-lik... [more]
CRK16_ARATH3.702e-1735.66Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-719 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-010_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417789 ID=CF417789; Name=CF417789; organism=Citrus sinensis; type=EST; length=723bp
TTTTGTTGGATGAGGAGTTTGAAGCTGTTGTTGGGGACTTTGGGTTGGCT
AAACTTATGGACTACAAGGATACCCATGNCACTACGGCAGTCCGTGGCAC
CATTGGGCATATAGCTCCAGAATACCTTTCTACTGGAAAATCTTCAGAGA
AAACTGATGTCTTTGGTTATGGGATTATGCTTCTAGAGCTAATCACTGGA
CAGAGAGCCTTTGATCTTGCTCGTCTTGCAAATGATGATGATGTCATGCT
GCTTGATTGGGTGAAAGGACTTCTGAAGGAAAAGAAGTTAGAAATGCTAG
TTGACCCTGATCTCCAGAACAATTATGTGGAAGCTGAGGTGGAGCAACTT
ATCCAGGTTGCGTTGCTCTGCACTCAAGGCTCCCCTATGGACCGGCCCAA
GATGTCGGAAGTTGTTAGAATGCTTGAAGGTGATGGCTTGGCAGAGCGGT
GGGATGAGTGGCAAAAGGTGGAAGTTCTCCGCCAAGAAGTAGAATTAGCC
CCTCATCCTAATTCAGATTGGATAGTTGACTCAACAGAAAATCTTCATGC
CGTTGAGTTATCTGGTCCAAGGTGACCCTGTCACTCCTATTAGCTATAAG
TAAAGAGGAAAATTTACTACTTTTTTTTATTCCTTTTTTTAATCATAATT
TTTCTTCTTTTTTTAATTTAACGATGATATCCTGATTTCTGTAAGCCCTT
CAGCATTGTATTCATTACACTTG
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