CF417791

Overview
NameCF417791
Unique NameCF417791
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417791 vs. ExPASy Swiss-Prot
Match: CP4FE_MOUSE (Leukotriene-B4 omega-hydroxylase 3 OS=Mus musculus GN=Cyp4f14 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.136e-17
Identity = 61/205 (29.76%), Postives = 104/205 (50.73%), Query Frame = 1
Query:    1 IALKMQAVLIGAYDNPSIAISTIIKFLXELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTI-DGYXIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDI---VPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEK-MIRNPNLM--PEKGLPVRLYP 594
            I  +    +   +D  +  +S I+  L   PE  E+  +E  E+   + P+E+  +DDL ++ +    I E LR+ PP +   R    ++ + DG  IPKG     ++   H +P  +P+PE +DP R+   +I    P +++PF AGP  C G+ FA  ++ V     + +FR   ++PD+K   R P L+   E GL +R+ P
Sbjct:  318 IRAEADTFMFEGHDTTASGLSWILYNLARHPEYQERCRQEVQELLRGREPEEI-EWDDLAQLPFLTMCIKESLRLHPPVTVISRCCTQDILLPDGRTIPKGIICLISIFGIHHNPSVWPDPEVYDPFRFDPENIKDSSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRFR---LLPDDKEPRRQPELILRAEGGLWLRVEP 518          
BLAST of CF417791 vs. ExPASy Swiss-Prot
Match: CP343_HUMAN (Cytochrome P450 3A43 OS=Homo sapiens GN=CYP3A43 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.136e-17
Identity = 61/197 (30.96%), Postives = 100/197 (50.76%), Query Frame = 1
Query:   22 VLIGAYDNPSIAISTIIKFLXELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYXIPKGFKLHWAVNATHKDPECFPNPEKFDPSRY---QGNDIVPFSYVPFGAGPHICPGKEFA----RLKLLVFFHNLVRKFRWEKIIPDEKMIRNPNLMPEKGLPVRLY 591
            ++  AYD  S  +  I+  L   P++ +++  E   +  +K P   +++D L +M+Y   V++E LR+ P  S   R    ++ I+G  IPKG  +   + A H DP+ +  PEKF P R+     + I  + Y+PFGAGP  C G  FA    +L ++    N   K   E  IP  K+   P L PEK + ++++
Sbjct:  302 IIFAAYDTTSTTLPFIMYELATHPDVQQKLQEEIDAVLPNKAP---VTYDALVQMEYLDMVVNETLRLFPVVSRVTRVCKKDIEINGVFIPKGLAVMVPIYALHHDPKYWTEPEKFCPERFSKKNKDSIDLYRYIPFGAGPRNCIGMRFALTNIKLAVIRALQNFSFKPCKETQIP-LKLDNLPILQPEKPIVLKVH 494          
BLAST of CF417791 vs. ExPASy Swiss-Prot
Match: THAS_BOVIN (Thromboxane-A synthase OS=Bos taurus GN=TBXAS1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.789e-17
Identity = 59/167 (35.33%), Postives = 81/167 (48.50%), Query Frame = 1
Query:   25 LIGAYDNPSIAISTIIKFLXELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYXIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIV---PFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWE 516
            LI  Y+  +  +S     L   PE  E++L E    +      E  S  +   + Y   VI E LRM PP     R A  +  + G  IP G  L  AV A H DPE +PNPE F+P R+         P++Y+PFGAGP  C G     L+L +   +++RKFR+E
Sbjct:  339 LIAGYEIVTNTLSFATYLLATNPECQEKLLEEVDCFSKEHLAPEYCSLQE--GLPYLDMVIKETLRMYPPAFRFTRVAAQDCEVLGQRIPAGAVLETAVGALHYDPEHWPNPENFNPERFTAEAQQRRRPYTYLPFGAGPRSCLGVRLGLLELKLTLLHILRKFRFE 503          
BLAST of CF417791 vs. ExPASy Swiss-Prot
Match: CP4D2_DROME (Cytochrome P450 4d2 OS=Drosophila melanogaster GN=Cyp4d2 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.789e-17
Identity = 59/199 (29.65%), Postives = 97/199 (48.74%), Query Frame = 1
Query:   10 KMQAVLIGAYDNPSIAISTIIKFLXELPEIYEQVLREQMEIANSKGPDEL--LSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYXIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGN--DIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKMIRNPNLMPEKGLPVRLYP 594
            ++   +   +D  + AIS  +  +   PE+ +++   Q EI +  G D    ++  DL  +K+  NVI E LR+ PP     R    +V I G  IP G      +    +DPE F +P++F P R+  +   I P++Y+PF AGP  C G++FA L++      L+R F    + P+ +   N  L    G+ + L P
Sbjct:  304 EVDTFMFEGHDTTTSAISFCLYEISRHPEVQQRL---QQEIRDVLGEDRKSPVTLRDLGELKFMENVIKESLRLHPPVPMIGRWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPEYFESPDEFRPERFDADVPQIHPYAYIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHFELLPLGPEPRHSMNIVLRSANGVHLGLKP 499          
BLAST of CF417791 vs. ExPASy Swiss-Prot
Match: CP26C_HUMAN (Cytochrome P450 26C1 OS=Homo sapiens GN=CYP26C1 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.789e-17
Identity = 55/153 (35.95%), Postives = 79/153 (51.63%), Query Frame = 1
Query:  160 LSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYXIPKGFKLHWAVNATHKDPECFPN-PEKFDPSRY------QGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKMIRN-PNLMPEKGLPVRLYP 594
            LS   L R++Y   V+ EVLR+ PP SG +R AL    +DGY IPKG+ + +++  TH+    + + PE FDP R+             F Y+PFG G   C G+E A+  L +    LVR  RWE   P    ++  P + P  GL +  +P
Sbjct:  358 LSLAALGRLRYVDCVVKEVLRLLPPVSGGYRTALRTFELDGYQIPKGWSVMYSIRDTHETAAVYRSPPEGFDPERFGAAREDSRGASSRFHYIPFGGGARSCLGQELAQAVLQLLAVELVRTARWELATPAFPAMQTVPIVHPVDGLRLFFHP 510          
BLAST of CF417791 vs. ExPASy Swiss-Prot
Match: CP51_MYCVP (Lanosterol 14-alpha demethylase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=cyp51 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17
Identity = 55/161 (34.16%), Postives = 87/161 (54.04%), Query Frame = 1
Query:   64 TIIKFLXELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYXIPKGFKLHWAVNATHKDPECFPNPEKFDPSRY----QGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE 534
            T+I+ L   PE Y +V   Q E+ +     + +SF  L+++    N + E LR+ PP     R A  E  + GY I KG  +  +   +++ PE FPNP+ FDP RY    Q + I  ++++PFGAG H C G  FA++++   F  L+R++ +E   P E
Sbjct:  269 TLIELLRH-PEFYAKV---QQELDDLYADGQEVSFHALRQIPSLDNALKETLRLHPPLIILMRVAQDEFEVAGYPIHKGQMVAASPAISNRIPEDFPNPDDFDPDRYEKPRQEDLINRWTWIPFGAGKHRCVGAAFAQMQIKAIFSVLLREYEFEMAQPPE 425          
BLAST of CF417791 vs. ExPASy Swiss-Prot
Match: CP4F4_RAT (Cytochrome P450 4F4 OS=Rattus norvegicus GN=Cyp4f4 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17
Identity = 62/205 (30.24%), Postives = 103/205 (50.24%), Query Frame = 1
Query:    1 IALKMQAVLIGAYDNPSIAISTIIKFLXELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTI-DGYXIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDI---VPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEK-MIRNPNLM--PEKGLPVRLYP 594
            I  +    +   +D  +  +S I+  L   PE  E+  +E  E+   +   E+  +DDL ++ +    I E LR+ PP +   R    ++ + DG  IPKG      + ATH +P  +P+PE +DP R+   +I    P +++PF AGP  C G+ FA  ++ V     + +FR   ++PD+K   R P L+   E GL +R+ P
Sbjct:  318 IRAEADTFMFEGHDTTASGLSWILYNLARHPEYQERCRQEVRELLRDRESTEI-EWDDLAQLPFLTMCIKESLRLHPPVTVISRRCTQDIVLPDGRVIPKGVICIINIFATHHNPTVWPDPEVYDPFRFDPENIKDRSPLAFIPFSAGPRNCIGQTFAMNEMKVALALTLLRFR---VLPDDKEPRRKPELILRAEGGLWLRVEP 518          
BLAST of CF417791 vs. ExPASy Swiss-Prot
Match: CP4F8_HUMAN (Cytochrome P450 4F8 OS=Homo sapiens GN=CYP4F8 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.758e-17
Identity = 59/205 (28.78%), Postives = 100/205 (48.78%), Query Frame = 1
Query:    1 IALKMQAVLIGAYDNPSIAISTIIKFLXELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTI-DGYXIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDI---VPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKMIRNPN---LMPEKGLPVRLYP 594
            I  +    + G +D  +  +S ++  L   PE  E+  +E  E+   + P E+  +DDL ++ +    + E LR+ PP     R    +V + D   IPKG   +  + A H +P  +P+PE +DP R+   +     P +++PF AGP  C G++FA  ++ V     + +FR   I+PD +  R      L  E GL +R+ P
Sbjct:  318 IRAEADTFMFGGHDTTASGLSWVLYNLARHPEYQERCRQEVQELLKDREPKEI-EWDDLAQLPFLTMCLKESLRLHPPIPTFARGCTQDVVLPDSRVIPKGNVCNINIFAIHHNPSVWPDPEVYDPFRFDPENAQKRSPMAFIPFSAGPRNCIGQKFAMAEMKVVLALTLLRFR---ILPDHREPRRTPEIVLRAEDGLWLRVEP 518          
BLAST of CF417791 vs. ExPASy Swiss-Prot
Match: CP4D8_DROME (Cytochrome P450 4d8 OS=Drosophila melanogaster GN=Cyp4d8 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.758e-17
Identity = 54/173 (31.21%), Postives = 92/173 (53.18%), Query Frame = 1
Query:   10 KMQAVLIGAYDNPSIAISTIIKFLXELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTE------VTIDGYXIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQ-GNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKF 507
            ++   +   +D  + A+S  +  L   PE+  ++L E +++  +      +S  DL  +KY   VI E LRM PP     R+  T+      V  DG  IP G ++   +   H+ PE FPNP++F P R++ G+ + PF  +PF AGP  C G++FA+L++ +    +VR++
Sbjct:  260 EVDTFMFEGHDTTTSALSFCLHELSRHPEVQAKMLEEIVQVLGTDR-SRPVSIRDLGELKYMECVIKESLRMYPPVPIVGRKLQTDFKYTHSVHGDGV-IPAGSEIIIGIFGVHRQPETFPNPDEFIPERHENGSRVAPFKMIPFSAGPRNCIGQKFAQLEMKMMLAKIVREY 430          
BLAST of CF417791 vs. ExPASy Swiss-Prot
Match: CP3AD_MOUSE (Cytochrome P450 3A13 OS=Mus musculus GN=Cyp3a13 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.758e-17
Identity = 58/194 (29.90%), Postives = 97/194 (50.00%), Query Frame = 1
Query:   25 LIGAYDNPSIAISTIIKFLXELPEIYEQVLREQMEIANSKGPDELLSFDDLKRMKYTWNVISEVLRMEPPNSGTFREALTEVTIDGYXIPKGFKLHWAVNATHKDPECFPNPEKFDPSRY---QGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDE---KMIRNPNLMPEKGLPVRL 588
            +   Y+  S A+S  +  L   P++ +++  E      +K P    ++D L +M+Y   V++E LR+ P      R   T+V I+G  IPKG  +     A HKDP+ +P PE+F P R+     + I P+ Y+PFG+GP  C G  FA + + V    +++ F  +     E   K+ +   L PE  L +++
Sbjct:  303 IFAGYETTSSALSFALYLLAIHPDVQKKLQDEIDAALPNKAP---ATYDTLLQMEYLDMVVNETLRLYPIAGRLERVCKTDVEINGLFIPKGTVVMIPTFALHKDPKYWPEPEEFRPERFSKKNQDSINPYMYLPFGSGPRNCIGMRFALINMKVALVRVLQNFTVQPCKETEIPLKLSKQGLLQPENPLLLKV 493          
The following BLAST results are available for this feature:
BLAST of CF417791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 352
Match NameE-valueIdentityDescription
CP4FE_MOUSE2.136e-1729.76Leukotriene-B4 omega-hydroxylase 3 OS=Mus musculus... [more]
CP343_HUMAN2.136e-1730.96Cytochrome P450 3A43 OS=Homo sapiens GN=CYP3A43 PE... [more]
THAS_BOVIN2.789e-1735.33Thromboxane-A synthase OS=Bos taurus GN=TBXAS1 PE=... [more]
CP4D2_DROME2.789e-1729.65Cytochrome P450 4d2 OS=Drosophila melanogaster GN=... [more]
CP26C_HUMAN2.789e-1735.95Cytochrome P450 26C1 OS=Homo sapiens GN=CYP26C1 PE... [more]
CP51_MYCVP3.643e-1734.16Lanosterol 14-alpha demethylase OS=Mycobacterium v... [more]
CP4F4_RAT3.643e-1730.24Cytochrome P450 4F4 OS=Rattus norvegicus GN=Cyp4f4... [more]
CP4F8_HUMAN4.758e-1728.78Cytochrome P450 4F8 OS=Homo sapiens GN=CYP4F8 PE=1... [more]
CP4D8_DROME4.758e-1731.21Cytochrome P450 4d8 OS=Drosophila melanogaster GN=... [more]
CP3AD_MOUSE4.758e-1729.90Cytochrome P450 3A13 OS=Mus musculus GN=Cyp3a13 PE... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-721 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-010_B12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417791 ID=CF417791; Name=CF417791; organism=Citrus sinensis; type=EST; length=714bp
ATTGCTTTGAAGATGCAAGCCGTTTTAATTGGTGCCTATGACAATCCAAG
CATTGCCATTAGTACCATCATCAAATTTCTTGNGGAGCTACCTGAAATTT
ATGAACAAGTTCTTAGAGAGCAAATGGAAATTGCGAATTCGAAAGGACCT
GATGAGTTGTTGAGCTTTGATGACCTAAAAAGGATGAAATACACTTGGAA
TGTCATAAGTGAAGTGTTAAGAATGGAACCGCCGAATTCTGGAACCTTTA
GAGAAGCCCTTACAGAAGTCACTATTGATGGATATANAATTCCCAAGGGA
TTTAAGTTACATTGGGCAGTAAATGCAACGCATAAAGACCCGGAATGCTT
TCCAAATCCAGAAAAGTTTGATCCATCAAGATACCAAGGAAATGATATAG
TTCCATTTTCTTATGTTCCATTTGGAGCAGGACCGCACATATGCCCTGGA
AAAGAGTTTGCTCGATTAAAATTACTTGTATTTTTTCACAATCTGGTCAG
AAAATTCAGGTGGGAGAAAATAATACCCGATGAGAAGATGATAAGGAACC
CAAATCTAATGCCCGAGAAAGGACTTCCAGTTCGCCTCTATCCCNACNAT
TAAACTCTAAATAATTATTATGATTAAATATTGTACTGTTGTGTGTACNA
ATAAATTATGCTAAAAAAATTAATGCAATTTTATAATAATTTTTTTTTGA
AAAAAAAAAAAAAA
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