CF417792
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417792 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.175e-12 Identity = 49/137 (35.77%), Postives = 67/137 (48.91%), Query Frame = 2 Query: 131 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGA-QIFSEGGLDYLGXPSLIHAQXILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPL 535 G+P P++L G PGD+G+D GL+ PE F + +E E+ HCRWAML G + PE L G W KA +G YLG P + + I A + + + E R + YPGG+FDPL Sbjct: 51 GQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEAL-------GLGNWVKAQEWAALPDGQATYLGNP--VPWGNLPTILAIEFLAIAFAEQQRTME---KDPEKKKYPGGAFDPL 175
BLAST of CF417792 vs. ExPASy Swiss-Prot
Match: LH15_EUGGR (Light-harvesting complex I LH35 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.423e-11 Identity = 30/74 (40.54%), Postives = 45/74 (60.81%), Query Frame = 2 Query: 134 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQI 355 +PP++LTGE+P D G+D ++ADP +A+ R EV H R +ML +G + PELL G+ WF+ G + Sbjct: 167 QPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELL-------GKGAWFEVGNSV 233 The following BLAST results are available for this feature:
BLAST of CF417792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417792 ID=CF417792; Name=CF417792; organism=Citrus sinensis; type=EST; length=536bpback to top |