CF417809
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDH_SACD2 (Malate dehydrogenase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=mdh PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 3.748e-27 Identity = 55/82 (67.07%), Postives = 64/82 (78.05%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 246 SA SAA++A H+RDW LGTPE WVSMGVYSDGSY + GLIYSFP C+NG+W IVQGL+IDEFSR K+ T EL EE+ Sbjct: 237 SAASAANAAIFHMRDWALGTPENDWVSMGVYSDGSYGIEEGLIYSFPCVCKNGDWEIVQGLTIDEFSRAKMTATENELKEER 318
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDH_CELJU (Malate dehydrogenase OS=Cellvibrio japonicus (strain Ueda107) GN=mdh PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.090e-26 Identity = 54/82 (65.85%), Postives = 64/82 (78.05%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 246 SA SAA++A +HIRDW LGTP WVSMGVYSDGSY + GLIYSFP C+NG+W IVQGL I+EFSR K+ T +EL EE+ Sbjct: 237 SAASAANAAINHIRDWALGTPANDWVSMGVYSDGSYGIEKGLIYSFPCVCKNGDWEIVQGLDINEFSRAKMTATEKELQEER 318
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDH_DEIDV (Malate dehydrogenase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=mdh PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.429e-26 Identity = 56/82 (68.29%), Postives = 65/82 (79.27%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 246 SA SAAS+A DH+RDW LGT EG WVSMG+ SDGSY VP GLIY FPVT ++G++ IVQGL I EFSR K+D TA EL EE+ Sbjct: 239 SAASAASAAIDHMRDWALGTSEGEWVSMGIPSDGSYGVPEGLIYGFPVTVKDGKYQIVQGLEISEFSRGKMDATARELEEER 320
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDHA_DICDI (Probable malate dehydrogenase 1 OS=Dictyostelium discoideum GN=mdhA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.429e-26 Identity = 55/87 (63.22%), Postives = 68/87 (78.16%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYS 261 SA SAA++ H+RDW+LGT +G VSM VYSDGSYNVP GLI+SFPVTC NG+WTIVQGL I+ +++K+D T +EL EEK A S Sbjct: 302 SAASAANAIVGHVRDWLLGTKDGEHVSMAVYSDGSYNVPKGLIFSFPVTCHNGQWTIVQGLKINSSTQQKIDATIKELQEEKETAMS 388
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDH_ALHEH (Malate dehydrogenase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=mdh PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.144e-26 Identity = 55/82 (67.07%), Postives = 64/82 (78.05%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 246 SA SAASSA DHIRDWVLGTPEG W SM V SDGSY + G+IYS+P CRNG++ IVQ L IDEFSR+K+ T +EL EE+ Sbjct: 237 SAASAASSAIDHIRDWVLGTPEGEWTSMAVPSDGSYGIEKGIIYSYPCVCRNGDYEIVQDLEIDEFSREKMQATEKELVEER 318
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDH_TERTT (Malate dehydrogenase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=mdh PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 5.412e-26 Identity = 53/82 (64.63%), Postives = 64/82 (78.05%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 246 SA SAA++A H+RDW LG+PEG WVSMGVYSDGSY + GLIYSFP C+NG+W IVQGLSIDEFS+ ++ T EL E+ Sbjct: 237 SAASAANAAIFHMRDWALGSPEGDWVSMGVYSDGSYGIEKGLIYSFPCVCKNGDWEIVQGLSIDEFSQARMTATETELQGER 318
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDH_MYCPA (Malate dehydrogenase OS=Mycobacterium paratuberculosis GN=mdh PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.057e-25 Identity = 54/82 (65.85%), Postives = 64/82 (78.05%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 246 SA SAAS+ D RDW+LGTP G WVSM V SDGSY VP GLI SFPVT ++G+WTIVQGL IDEFSR ++D T EL++E+ Sbjct: 239 SAASAASATTDAARDWLLGTPAGDWVSMAVISDGSYGVPEGLISSFPVTTKDGDWTIVQGLEIDEFSRSRIDKTTAELADER 320
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDH_MYCA1 (Malate dehydrogenase OS=Mycobacterium avium (strain 104) GN=mdh PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.057e-25 Identity = 54/82 (65.85%), Postives = 64/82 (78.05%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 246 SA SAAS+ D RDW+LGTP G WVSM V SDGSY VP GLI SFPVT ++G+WTIVQGL IDEFSR ++D T EL++E+ Sbjct: 239 SAASAASATTDAARDWLLGTPAGDWVSMAVISDGSYGVPEGLISSFPVTTKDGDWTIVQGLEIDEFSRSRIDKTTAELADER 320
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDHC_DICDI (Probable malate dehydrogenase 3 OS=Dictyostelium discoideum GN=mdhC PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.581e-25 Identity = 54/85 (63.53%), Postives = 65/85 (76.47%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALA 255 SA SAA + DH+ DWVLGT EG +VSMGVYSDGSY VP GLI+SFPV C NG++TIVQGL +D+ S+ ++LT EEL EK A Sbjct: 243 SAASAAKAITDHMHDWVLGTAEGEYVSMGVYSDGSYGVPEGLIFSFPVKCANGKYTIVQGLQMDDLSKNLINLTTEELVAEKTTA 327
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDH_BDEBA (Malate dehydrogenase OS=Bdellovibrio bacteriovorus GN=mdh PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 7.815e-25 Identity = 53/82 (64.63%), Postives = 68/82 (82.93%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 246 SA SAAS+A DHIRDW LGT G WV+MG+ SDGSY++P G++Y FPVTC+NGE+ IV+GL ID FSR+K++ T +EL+EEK Sbjct: 248 SAASAASAAVDHIRDWWLGT-NGEWVTMGIPSDGSYDIPEGIMYGFPVTCKNGEYEIVKGLEIDAFSREKMNNTLKELNEEK 328 The following BLAST results are available for this feature:
BLAST of CF417809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 152
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417809 ID=CF417809; Name=CF417809; organism=Citrus sinensis; type=EST; length=537bpback to top |