CF417809
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDH_ARTAT (Malate dehydrogenase OS=Arthrobacter aurescens (strain TC1) GN=mdh PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 7.815e-25 Identity = 52/83 (62.65%), Postives = 64/83 (77.11%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 249 SA SAAS+ D RDW+LGTPEG WVSM V SDGSY VP GL+YS+PVT G W IV+GL +++FSR+K+D TA EL +E+A Sbjct: 238 SAASAASATIDAARDWLLGTPEGDWVSMAVASDGSYGVPEGLMYSYPVTTSGGNWEIVEGLEVNDFSRRKMDATAAELFDERA 320
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDH_MYCLE (Malate dehydrogenase OS=Mycobacterium leprae GN=mdh PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.274e-24 Identity = 52/82 (63.41%), Postives = 64/82 (78.05%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 246 SA SAAS+ D RDW+LGTPEG WVSM V SDGSY VP GLI SFPVT +G+WTIV+GL ID+FSR ++D + EL++E+ Sbjct: 239 SAASAASATIDAARDWLLGTPEGNWVSMAVVSDGSYGVPEGLISSFPVTTTDGDWTIVRGLGIDDFSRGRIDKSTAELADER 320
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDH_DEIRA (Malate dehydrogenase OS=Deinococcus radiodurans GN=mdh PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.274e-24 Identity = 50/82 (60.98%), Postives = 64/82 (78.05%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 246 SA SAAS+A DH+ DW LGT +G WVSMG+ SDGSY +P GLIY FPV ++G++ IVQGL + +FSR K+D TA+EL EE+ Sbjct: 239 SAASAASAAIDHMHDWALGTKDGEWVSMGIPSDGSYGIPEGLIYGFPVRVKDGKYEIVQGLDVSDFSRGKMDATAQELEEER 320
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDHC_FELCA (Malate dehydrogenase, cytoplasmic OS=Felis catus GN=MDH1 PE=2 SV=3) HSP 1 Score: 111.309 bits (277), Expect = 2.970e-24 Identity = 53/91 (58.24%), Postives = 71/91 (78.02%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYSCXS 270 SA+SAA + CDH+RD GTPEG +VSMG+ SDG+ Y VP L+YSFPVT +N W +V+GL+I++FSR+K+DLTA+EL+EEK A+ S Sbjct: 242 SAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNPYGVPDDLLYSFPVTIKNKTWKVVEGLTINDFSREKMDLTAKELAEEKETAFEFLS 332
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDH_THETH (Malate dehydrogenase OS=Thermus thermophilus GN=mdh PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.065e-24 Identity = 47/81 (58.02%), Postives = 66/81 (81.48%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 243 SA SAA++A +HIRDW LGTPEG WVSM V S G Y +P G++YSFPVT ++G + +V+GL I+EF+RK++++TA+EL +E Sbjct: 237 SAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDE 317
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDH_THET8 (Malate dehydrogenase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=mdh PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.065e-24 Identity = 47/81 (58.02%), Postives = 66/81 (81.48%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 243 SA SAA++A +HIRDW LGTPEG WVSM V S G Y +P G++YSFPVT ++G + +V+GL I+EF+RK++++TA+EL +E Sbjct: 237 SAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDE 317
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDH_THET2 (Malate dehydrogenase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=mdh PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.065e-24 Identity = 47/81 (58.02%), Postives = 66/81 (81.48%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEE 243 SA SAA++A +HIRDW LGTPEG WVSM V S G Y +P G++YSFPVT ++G + +V+GL I+EF+RK++++TA+EL +E Sbjct: 237 SAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDE 317
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDH_ACIAD (Malate dehydrogenase OS=Acinetobacter sp. (strain ADP1) GN=mdh PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.065e-24 Identity = 51/83 (61.45%), Postives = 65/83 (78.31%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 249 SA SAA++A DH+RDW LGT G WV+MG+ SDGSY +P G+IY PVTC NGE+ V+GL IDEFSR+++D T +EL EE+A Sbjct: 240 SAASAANAAIDHMRDWALGT-NGKWVTMGIPSDGSYGIPEGVIYGVPVTCENGEYKRVEGLEIDEFSRERMDKTLQELEEERA 321
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDH_THEFY (Malate dehydrogenase OS=Thermobifida fusca (strain YX) GN=mdh PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 6.616e-24 Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 246 SA SAA++A DH+ DWV GTPEG W S+ + SDGSY VP GL+ SFPV RNG W IVQGL I+EFSR+++D + EL EE+ Sbjct: 239 SAASAANAAIDHVYDWVNGTPEGDWTSVALPSDGSYGVPEGLVSSFPVVSRNGSWEIVQGLEINEFSRERIDASVRELEEER 320
BLAST of CF417809 vs. ExPASy Swiss-Prot
Match: MDHC_PIG (Malate dehydrogenase, cytoplasmic OS=Sus scrofa GN=MDH1 PE=1 SV=4) HSP 1 Score: 110.153 bits (274), Expect = 6.616e-24 Identity = 54/91 (59.34%), Postives = 70/91 (76.92%), Query Frame = 1 Query: 1 SALSAASSACDHIRDWVLGTPEGTWVSMGVYSDG-SYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKALAYSCXS 270 SA+SAA + CDH+RD GTPEG +VSMG+ SDG SY VP L+YSFPVT ++ W IV+GL I++FSR+K+DLTA+EL+EEK A+ S Sbjct: 242 SAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKIVEGLPINDFSREKMDLTAKELAEEKETAFEFLS 332 The following BLAST results are available for this feature:
BLAST of CF417809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 152
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417809 ID=CF417809; Name=CF417809; organism=Citrus sinensis; type=EST; length=537bpback to top |