CF417864
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417864 vs. ExPASy Swiss-Prot
Match: NOP58_YEAS7 (Nucleolar protein 58 OS=Saccharomyces cerevisiae (strain YJM789) GN=NOP58 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.582e-16 Identity = 49/117 (41.88%), Postives = 73/117 (62.39%), Query Frame = 1 Query: 1 YHASLVGQAAPKHKGKISRSLAAKTALAIRCDALGDDQDNS--MGLENRAKLEARLRNLEGKELSRAAGSAKGKPKLEVYDKDRKKGPGAMITAAKTYNPAADSVFGLTENAADGNE 345 YHASLVGQA K+KGKI+R LAAK A+++R DAL +D+D+S +GLE+RAK+E RL LEG++L + K+E +T A+ YN AD+ +++ +D ++ Sbjct: 343 YHASLVGQATGKNKGKIARVLAAKAAVSLRYDALAEDRDDSGDIGLESRAKVENRLSQLEGRDLRTTPKVVREAKKVE-------------MTEARAYNADADTAKAASDSESDSDD 446
BLAST of CF417864 vs. ExPASy Swiss-Prot
Match: NOP58_VANPO (Nucleolar protein 58 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=NOP58 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.067e-16 Identity = 52/117 (44.44%), Postives = 73/117 (62.39%), Query Frame = 1 Query: 1 YHASLVGQAAPKHKGKISRSLAAKTALAIRCDALGDDQDNS--MGLENRAKLEARLRNLEGKELSRAAGSAKGKPKLEVYDKDRKKGPGAMITAAKTYNPAADSVFGLTENAADGNE 345 YHASLVGQA K+KGKI+R LAAK A+++R DAL +D+D+S +GLE RAK+E RL LEG++L + K+E IT A+ YN AD+ + E+A+D ++ Sbjct: 343 YHASLVGQATGKNKGKIARVLAAKAAVSLRYDALAEDRDDSGDIGLEARAKVENRLSQLEGRDLRTTPKVVREAKKVE-------------ITEARAYNADADTA-AVEESASDSDD 445
BLAST of CF417864 vs. ExPASy Swiss-Prot
Match: NOP58_PICST (Nucleolar protein 58 OS=Pichia stipitis GN=NOP58 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.604e-16 Identity = 48/104 (46.15%), Postives = 69/104 (66.35%), Query Frame = 1 Query: 1 YHASLVGQAAPKHKGKISRSLAAKTALAIRCDALGDDQDNS--MGLENRAKLEARLRNLEGKELSRAAGSAKGKPKLEVYDKDRKKGPGAMITAAKTYNPAADS 306 YHASLVGQA+ K+KGKI+R LAAK A+A+R D+L +++D+S GLE RAK+E+RL LEG++L + + +PK++ IT A+ YN AD+ Sbjct: 343 YHASLVGQASGKNKGKIARVLAAKAAVALRYDSLAEERDDSGDFGLEVRAKVESRLSALEGRDLRTTSKVVREQPKVD-------------ITEARAYNADADA 433
BLAST of CF417864 vs. ExPASy Swiss-Prot
Match: NOP58_DEBHA (Nucleolar protein 58 OS=Debaryomyces hansenii GN=NOP58 PE=3 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 1.026e-15 Identity = 48/104 (46.15%), Postives = 67/104 (64.42%), Query Frame = 1 Query: 1 YHASLVGQAAPKHKGKISRSLAAKTALAIRCDALGDDQDNS--MGLENRAKLEARLRNLEGKELSRAAGSAKGKPKLEVYDKDRKKGPGAMITAAKTYNPAADS 306 YHASLVGQA+ K+KGKI+R LAAK A+A+R D+L +D+D+S GL R K+E+RL LEG++L A + +PK++ IT A+ YN AD+ Sbjct: 343 YHASLVGQASGKNKGKIARVLAAKAAVALRYDSLAEDRDDSGDFGLSVRTKVESRLSALEGRDLRTTAKVIREQPKVD-------------ITEARAYNADADA 433
BLAST of CF417864 vs. ExPASy Swiss-Prot
Match: NOP58_ASHGO (Nucleolar protein 58 OS=Ashbya gossypii GN=NOP58 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.026e-15 Identity = 46/101 (45.54%), Postives = 64/101 (63.37%), Query Frame = 1 Query: 1 YHASLVGQAAPKHKGKISRSLAAKTALAIRCDALGDDQDNS--MGLENRAKLEARLRNLEGKELSRAAGSAKGKPKLEVYDKDRKKGPGAMITAAKTYNPA 297 YHASLVGQA K+KGKI+R LAAK A+++R DAL +D+D+S +GLE RAK+E+RL LEG++L ++ K+E+ + TA PA Sbjct: 343 YHASLVGQATGKNKGKIARVLAAKAAVSLRYDALAEDRDDSGDIGLEARAKVESRLSQLEGRDLRTTPKVSRDAKKIEISEARAYNADADAATAPADSTPA 443
BLAST of CF417864 vs. ExPASy Swiss-Prot
Match: NOP58_LODEL (Nucleolar protein 58 OS=Lodderomyces elongisporus GN=NOP58 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.285e-15 Identity = 44/117 (37.61%), Postives = 74/117 (63.25%), Query Frame = 1 Query: 1 YHASLVGQAAPKHKGKISRSLAAKTALAIRCDALGDDQD--NSMGLENRAKLEARLRNLEGKELSRAAGSAKGKPKLEVYDKDRKKGPGAMITAAKTYNPAADSVFGLTENAADGNE 345 YHASLVGQA+ K+KG+I+R+LAAK AL++R D +++D +S GL+NR K+E+RL LEG+++ + ++ + K++ IT A+ YN AD+ + + +D ++ Sbjct: 343 YHASLVGQASGKNKGRIARTLAAKAALSVRYDCFDEERDDSDSFGLDNRGKVESRLSKLEGRDMRTTSKVSRQQGKID-------------ITEARAYNADADAPSAVADADSDDDD 446
BLAST of CF417864 vs. ExPASy Swiss-Prot
Match: NOP58_CANGA (Nucleolar protein 58 OS=Candida glabrata GN=NOP58 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.898e-15 Identity = 51/117 (43.59%), Postives = 71/117 (60.68%), Query Frame = 1 Query: 1 YHASLVGQAAPKHKGKISRSLAAKTALAIRCDALGDDQDNS--MGLENRAKLEARLRNLEGKELSRAAGSAKGKPKLEVYDKDRKKGPGAMITAAKTYNPAADSVFGLTENAADGNE 345 YHASLVGQA+ ++KGKI+R LAAK A+A+R DAL +D+D+S +GLE RAK+E RL +EG++L + K+E +T A+ YN AD T AAD ++ Sbjct: 343 YHASLVGQASGRNKGKIARVLAAKAAVALRYDALAEDRDDSGDIGLEVRAKVENRLSQIEGRDLRTTPKVVREAKKVE-------------MTEARAYNADAD-----TAAAADSDD 441
BLAST of CF417864 vs. ExPASy Swiss-Prot
Match: NOP58_YARLI (Nucleolar protein 58 OS=Yarrowia lipolytica GN=NOP58 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.934e-14 Identity = 47/117 (40.17%), Postives = 72/117 (61.54%), Query Frame = 1 Query: 1 YHASLVGQAAPKHKGKISRSLAAKTALAIRCDALGDDQDN--SMGLENRAKLEARLRNLEGKELSRAAGSAKGKPKLEVYDKDRKKGPGAMITAAKTYNPAADSVFGLTENAADGNE 345 YHASL+GQA+ K+KGKI+R LAAK ++++R DA +++++ +G++NR K+E RLR LEGKE+ G + +V + KK ++ K YN AD+V T A +E Sbjct: 343 YHASLIGQASGKNKGKIARMLAAKASVSMRYDAFAEEREDVPILGIDNRIKVENRLRQLEGKEI-------VGTVRPDVNKIEHKK---VDLSTGKQYNADADTVGNTTAGADSDDE 449
BLAST of CF417864 vs. ExPASy Swiss-Prot
Match: NOP58_PICGU (Nucleolar protein 58 OS=Pichia guilliermondii GN=NOP58 PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 2.793e-13 Identity = 38/79 (48.10%), Postives = 57/79 (72.15%), Query Frame = 1 Query: 1 YHASLVGQAAPKHKGKISRSLAAKTALAIRCDALGDDQDNS--MGLENRAKLEARLRNLEGKELSRAAGSAKGKPKLEV 231 YHASLVGQA K+KGKI+R LAAK A+A+R D+L +++D+S G RAK+E+RL LEG+++ + + + K+E+ Sbjct: 343 YHASLVGQATGKNKGKIARVLAAKAAVALRYDSLSEERDDSGDFGFSVRAKVESRLSALEGRDMRTTSKVVREQQKIEI 421
BLAST of CF417864 vs. ExPASy Swiss-Prot
Match: NOP58_USTMA (Nucleolar protein 58 OS=Ustilago maydis GN=NOP58 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.061e-12 Identity = 52/123 (42.28%), Postives = 70/123 (56.91%), Query Frame = 1 Query: 1 YHASLVGQAAPKHKGKISRSLAAKTALAIRCDALGDDQDNS------MGLENRAKLEARLRNLE---GKELSRAAGSAKGKPKLEVYDKDRKKGPGAMITAAKTYNPAADSVFGLTENAADGN 342 YH+SLVGQA K KGK++R +A K AL+IR DAL D S +G+E RAKLE+RLR LE G R+A +A G D+ K+ M ++YN AAD+ G ++ A+ N Sbjct: 353 YHSSLVGQAPQKLKGKMARMVATKAALSIRLDALADADTKSDEGAPTVGIEARAKLESRLRALEMQSGLSGMRSARNAAG-------DQGHKQKGFQMEAGGRSYNAAADAA-GPSDMASAAN 467 The following BLAST results are available for this feature:
BLAST of CF417864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417864 ID=CF417864; Name=CF417864; organism=Citrus sinensis; type=EST; length=349bpback to top |