CF417867
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417867 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.124e-25 Identity = 75/170 (44.12%), Postives = 92/170 (54.12%), Query Frame = 3 Query: 3 ENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 467 E + +E E+IHCRWAML G + PE L G W +A GG YLGNP V ++ I + + + VE R DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 91 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 255
BLAST of CF417867 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.124e-25 Identity = 74/170 (43.53%), Postives = 93/170 (54.71%), Query Frame = 3 Query: 3 ENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQRSMEK------DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 467 E + +E E+IHCRWAML G + PE L G W + GG YLGNP V ++ I + + + VE R + DP YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 91 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDP---LYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 255
BLAST of CF417867 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.364e-24 Identity = 74/170 (43.53%), Postives = 92/170 (54.12%), Query Frame = 3 Query: 3 ENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 467 E + +E E+IHCRWAML G + PE L G W +A GG YLGNP V ++ I + + + VE R DP YPGG+FDPLG ++DP+ F E KVK IKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 91 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP---LYPGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 255
BLAST of CF417867 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.782e-24 Identity = 74/170 (43.53%), Postives = 92/170 (54.12%), Query Frame = 3 Query: 3 ENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQRSMEK------DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 467 E + +E E+IHCRWAML G + PE G W +A GG YLGNP V ++ I + + + VE R DP YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 91 ETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDP---LYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 255
BLAST of CF417867 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.782e-24 Identity = 72/170 (42.35%), Postives = 92/170 (54.12%), Query Frame = 3 Query: 3 ENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 467 E + +E E+IHCRWAML G + PE G W++A GG YLGNP V ++ I + L + VE R + DP YPGG+FDPLG ++DP+ F E KVKE KNGRLA+ + GF + Q+ G GPLENLA HL DP +NN Sbjct: 91 ETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDP---LYPGGSFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFI-QAIVTGKGPLENLADHLVDPVNNN 255
BLAST of CF417867 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 1.782e-24 Identity = 74/170 (43.53%), Postives = 92/170 (54.12%), Query Frame = 3 Query: 3 ENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 467 E + +E E+IH RWAML G + PE L G W +A GG YLGNP + ++ I ++ + + VE R DP YPGGAFDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 89 ETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 253
BLAST of CF417867 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 1.782e-24 Identity = 74/170 (43.53%), Postives = 90/170 (52.94%), Query Frame = 3 Query: 3 ENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 467 E + +E E+IHCRWAML G + PE L G W +A GG YLGNP + ++ I + + + FVE R DP YPGGAFDPLG + DP F E KVKEIKNGRLA+ + GF V Q+ G GP+ENL HLADP NN Sbjct: 89 ETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPI---YPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLFDHLADPVANN 253
BLAST of CF417867 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.327e-24 Identity = 74/170 (43.53%), Postives = 91/170 (53.53%), Query Frame = 3 Query: 3 ENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQRSMEK------DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 467 E + +E E+IHCRWAML G + PE G W +A GG YLGNP V ++ I + + + VE R DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 90 ETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 254
BLAST of CF417867 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.039e-24 Identity = 74/170 (43.53%), Postives = 92/170 (54.12%), Query Frame = 3 Query: 3 ENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQRSMEK------DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 467 E + +E E+IHCRWAML G + PE L G W +A GG YLGNP V +L I + + + VE R DP YPGG+FDPLG ++ PQ F E KVKEIKNGRLA+ + GF V Q+ G GPLE+LA H+ADP +NN Sbjct: 90 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGG-LDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDP---LYPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLEDLADHIADPVNNN 254
BLAST of CF417867 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.969e-24 Identity = 72/170 (42.35%), Postives = 91/170 (53.53%), Query Frame = 3 Query: 3 ENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 467 E + +E E+IHCRWAML G + PE L G W +A GG YLGNP V ++ I + + + +E R DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPL+NL HLADP +NN Sbjct: 91 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLDNLVDHLADPVNNN 255 The following BLAST results are available for this feature:
BLAST of CF417867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417867 ID=CF417867; Name=CF417867; organism=Citrus sinensis; type=EST; length=618bpback to top |