CF417870

Overview
NameCF417870
Unique NameCF417870
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length705
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417870 vs. ExPASy Swiss-Prot
Match: AQPZ_CHRVO (Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.139e-13
Identity = 34/99 (34.34%), Postives = 48/99 (48.48%), Query Frame = 3
Query:  369 GCGLVKAFQKSYYXXYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRXAXDSHVPVLAPLPIGFAVFMVHLATIPVTGTGIXPARSLGAAV 665
            G  + K F  + Y  +  G      GYS    L  E++ T   +  +  ATD +  A        APL IG A+ ++HL +IPVT T + PARS G A+
Sbjct:  107 GFDVAKGFASNGYAEHSPG------GYSLLAALVCEVVMTMFFLLVIMGATDKRAPAG------FAPLAIGLALTLIHLISIPVTNTSVNPARSTGVAL 193          

HSP 2 Score: 38.891 bits (89), Expect = 1.139e-13
Identity = 19/50 (38.00%), Postives = 28/50 (56.00%), Query Frame = 1
Query:  160 TAVMRCG----GVGILGIAWAFGGMIFVLVYCXAGISGGHINPXXTFGLF 297
            +AV+  G    G+G  G+A AFG  +  + Y    ISG H+NP  + GL+
Sbjct:   21 SAVLAAGFPNLGIGFAGVALAFGLTVVTMAYAIGHISGCHLNPAVSIGLW 70          
BLAST of CF417870 vs. ExPASy Swiss-Prot
Match: AQPZ_RHOPA (Aquaporin Z OS=Rhodopseudomonas palustris GN=aqpZ PE=3 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 1.477e-13
Identity = 39/122 (31.97%), Postives = 57/122 (46.72%), Query Frame = 3
Query:  342 LAXCLGAICGCGLVKAFQKSYYXXYGGGANELADGYSTGTGLGA--------------EIIGTFVLVYTVFSATDPKRXAXDSHVPVLAPLPIGFAVFMVHLATIPVTGTGIXPARSLGAAV 665
            +A  LGAI    L+      Y    G    +LA G+++  G GA              E++ T + ++ +  +T  K  A        APL IG A+ M+HL +IPVT T + PARS G A+
Sbjct:   87 IAQVLGAIAAAALL------YLIASGAAGFDLAKGFASN-GYGAHSPGQYNLVACFVMEVVMTMMFLFVIMGSTHGKAPAG------FAPLAIGLALVMIHLVSIPVTNTSVNPARSTGPAL 195          

HSP 2 Score: 40.0466 bits (92), Expect = 1.477e-13
Identity = 16/38 (42.11%), Postives = 24/38 (63.16%), Query Frame = 1
Query:  181 GVGILGIAWAFGGMIFVLVYCXAGISGGHINPXXTFGL 294
            G+G++G++ AFG  +  + Y    ISG H+NP  T GL
Sbjct:   34 GIGLVGVSLAFGLSVVTMAYAIGHISGCHLNPAVTLGL 71          
BLAST of CF417870 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 2.261e-13
Identity = 39/113 (34.51%), Postives = 60/113 (53.10%), Query Frame = 3
Query:  345 AXCLGAICGCGLVKAFQKSYYXXYGGGA-NELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRXAXDSHVPVLAP-LPIGFAVFMVHLATIPVTGTGIXPARSLGAAVIYSK 677
            A  +GAI G G++  +  +     G  A N L +  + G  +  E+I TF L   +F++TD +R +     PV +P L IG +V + HL  I  TG  + PARS G AV+ ++
Sbjct:   93 AQLVGAIAGAGIL--YGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNR 198          

HSP 2 Score: 35.8094 bits (81), Expect = 2.261e-13
Identity = 19/40 (47.50%), Postives = 21/40 (52.50%), Query Frame = 1
Query:  190 ILGIAWAFGGMIFVLVYCXAGISGGHINPXXTFGLFLARQ 309
            IL IA AFG  I  L      +SGGHINP  T  L +  Q
Sbjct:   42 ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQ 81          

HSP 3 Score: 26.9498 bits (58), Expect = 2.261e-13
Identity = 11/35 (31.43%), Postives = 23/35 (65.71%), Query Frame = 3
Query:   39 EELTQWSFYRATIAEFIATLLFLYITVLTVIGYKS 143
            +E+   +F +A  AEF+ATL+F++  + + + + S
Sbjct:    3 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPS 37          
BLAST of CF417870 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 56.225 bits (134), Expect = 2.490e-13
Identity = 42/111 (37.84%), Postives = 57/111 (51.35%), Query Frame = 3
Query:  339 WLAXCLGAICGCGLVKAFQKSYYXXYGGGA-NELADGYSTGTGLGAEIIGTFVLVYTVFS-ATDPKRXAXDSHVPVLAPLPIGFAVFMVHLATIPVTGTGIXPARSLGAAV 665
            W+A  LGA   C L++      Y  +G         G S   G+  EI+ TF LVYTV++ A DPK+ +  +    +AP+ IGF V    LA  P +G  + PARS G AV
Sbjct:  105 WVAQLLGASVACFLLQ------YVTHGQAIPTHGVSGISEIEGVVMEIVITFALVYTVYATAADPKKGSLGT----IAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAV 205          

HSP 2 Score: 38.1206 bits (87), Expect = 2.490e-13
Identity = 19/36 (52.78%), Postives = 23/36 (63.89%), Query Frame = 1
Query:  187 GILGIAWAFGGMIFVLVYCXAGISGGHINPXXTFGL 294
            G++ IA A    +FV V   A ISGGH+NP  TFGL
Sbjct:   55 GLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGL 90          
BLAST of CF417870 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 2.934e-13
Identity = 41/125 (32.80%), Postives = 59/125 (47.20%), Query Frame = 3
Query:  339 WLAXCLGAICGCGLVKAFQKSYYXXYGGGANEL--ADGYSTGTGLGAEIIGTFVLVYTVF-SATDPKRXAXDSHVPVLAPLPIGFAVFMVHLATIPVTGTGIXPARSLGAAVIYSKEKAWDDQWI 704
            W+A  LG+   C L++          GG A       G S    L  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    L      G  + PA S G A++     +W+ QW+
Sbjct:  107 WIAQLLGSTVACFLLR-------FSTGGLATGTFGLTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWESQWV 217          

HSP 2 Score: 38.891 bits (89), Expect = 2.934e-13
Identity = 18/38 (47.37%), Postives = 23/38 (60.53%), Query Frame = 1
Query:  187 GILGIAWAFGGMIFVLVYCXAGISGGHINPXXTFGLFL 300
            G++  A A    +FV V   A ISGGH+NP  TFG F+
Sbjct:   57 GLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFV 94          

HSP 3 Score: 23.483 bits (49), Expect = 2.934e-13
Identity = 8/15 (53.33%), Postives = 14/15 (93.33%), Query Frame = 3
Query:   66 RATIAEFIATLLFLY 110
            +A +AEFI+TL+F++
Sbjct:   21 KAALAEFISTLIFVF 35          
BLAST of CF417870 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13
Identity = 63/213 (29.58%), Postives = 94/213 (44.13%), Query Frame = 3
Query:   36 AEELTQWSFYRATIAEFIATLLFLYITVLTVIG--YKSQTDANHGGDEMWWCWHSGHRLGLWWHDXXXXXXXXWYLWXTH*PXGDIWAVLGAARCHWCEP*CTWLAXCLGAICGCGLVKAFQKSYYXXYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRXAXDSHVPVLAPLPIGFAVFMVHLATIPVTGTGIXPARSLGAAVI 668
            A E  + +F+RA IAEF+A +LF++I++   +G  +  +  AN                G+             ++   H         L + +    +     +A CLGA+    ++     S       G N L+ G S G GLG EI+ TF LV  V + TD +R      V    PL IG +V + HL  I  TG G+ PARS G+AV+
Sbjct:    2 ASEFKKKAFWRAVIAEFLAMILFVFISIGAALGFNFPIEEKANQTVGRSQDIVKVSLAFGI---SIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGIT-SGLENNSLGLNGLSPGVSAGQGLGVEILVTFQLVLCVVAVTDRRRHDVSGSV----PLAIGLSVALGHLIAIDYTGCGMNPARSFGSAVL 206          
BLAST of CF417870 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.081e-13
Identity = 38/121 (31.40%), Postives = 58/121 (47.93%), Query Frame = 3
Query:  342 LAXCLGAICGCGLVKAFQKSYYXXYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRXAXDSHVPVLAPLPIGFAVFMVHLATIPVTGTGIXPARSLGAAVIYSKEKAWDDQWI 704
            +  C+GAI G  ++K    + +         LA G +   G   E   TFVL+  V S  D +R     ++   AP+ +G A+   HLA I  TG+ + PARS G AV  + +  W + W+
Sbjct:  108 IVQCVGAIAGSAILKVITPAEFRGTLC-MTSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRR----KNLGNAAPVAVGLAITCCHLAAIKYTGSSMNPARSFGPAV--NGDDNWANHWV 221          

HSP 2 Score: 35.8094 bits (81), Expect = 7.081e-13
Identity = 19/47 (40.43%), Postives = 25/47 (53.19%), Query Frame = 1
Query:  160 TAVMRCGGVGILGIAWAFGGMIFVLVYCXAGISGGHINPXXTFGLFL 300
            T V    G  ++ IA  FG +I  +V C   +SG HINP  T GL +
Sbjct:   48 TGVQISEGDVVVRIALTFGFIIATMVQCIGHVSGCHINPAVTCGLLV 94          
BLAST of CF417870 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 7.084e-13
Identity = 44/127 (34.65%), Postives = 62/127 (48.82%), Query Frame = 3
Query:  339 WLAXCLGAICGCGLVKAFQKSYYXXYGGGANELADGYSTGTG-LGA---EIIGTFVLVYTVFS-ATDPKRXAXDSHVPVLAPLPIGFAVFMVHLATIPVTGTGIXPARSLGAAVIYSKEKAWDDQWI 704
            W+A  LG++  C ++K           GG    A G S G G L A   EI+ TF LVYTV++ A DPK  +  +    +AP+ IGF V    LA    +G  + PA + G AV+      W + W+
Sbjct:  107 WIAQLLGSVVACLILKFAT--------GGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGSLGT----IAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV---SWTWTNHWV 218          

HSP 2 Score: 39.6614 bits (91), Expect = 7.084e-13
Identity = 20/40 (50.00%), Postives = 25/40 (62.50%), Query Frame = 1
Query:  181 GVGILGIAWAFGGMIFVLVYCXAGISGGHINPXXTFGLFL 300
            G+    +A AFG  +FV V   A ISGGH+NP  TFG F+
Sbjct:   57 GLVAAAVAHAFG--LFVAVSVGANISGGHVNPAVTFGAFI 94          
BLAST of CF417870 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.195e-12
Identity = 36/118 (30.51%), Postives = 56/118 (47.46%), Query Frame = 3
Query:  351 CLGAICGCGLVKAFQKSYYXXYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRXAXDSHVPVLAPLPIGFAVFMVHLATIPVTGTGIXPARSLGAAVIYSKEKAWDDQWI 704
            C+GAI G  ++K            G +  +   + G  +  E + TF+LV  V   +DP R    + +   APL +G ++   HL  I +TG  + PARS G AV+   +  W D W+
Sbjct:  107 CVGAIAGAAVIKVGVSEAVSGLDLGVSSFSSTLTVGQAVLIEALITFILVVVVKGVSDPGR----TDIKGSAPLAVGLSIAAGHLCAIKLTGASMNPARSFGPAVV---QNMWIDHWV 217          

HSP 2 Score: 28.8758 bits (63), Expect = 1.195e-12
Identity = 14/34 (41.18%), Postives = 17/34 (50.00%), Query Frame = 1
Query:  199 IAWAFGGMIFVLVYCXAGISGGHINPXXTFGLFL 300
            IA+ FG  +  L      ISG HINP  T G  +
Sbjct:   57 IAFTFGLTVATLAQAIGHISGCHINPAVTVGFLI 90          
BLAST of CF417870 vs. ExPASy Swiss-Prot
Match: AQPZ_GLOVI (Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 1.553e-12
Identity = 36/114 (31.58%), Postives = 57/114 (50.00%), Query Frame = 3
Query:  345 AXCLGAICGCGLVK--AFQKSYYXXYGGGANE-----LADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRXAXDSHVPVLAPLPIGFAVFMVHLATIPVTGTGIXPARSLGAAV 665
            A  LG I G G++   A  K+ +   GG A+         GY+    L  E++ TF+ +  +  +TD +           AP+ IG ++ ++HL +IPVT T + PARS G A+
Sbjct:   89 AQVLGGIAGAGVLYLIAGGKAGFSLSGGFASNGYGLHSPGGYTLLACLVCEVVMTFMFLMIILGSTDRRAPKG------FAPIAIGLSLTLIHLISIPVTNTSVNPARSTGPAL 196          

HSP 2 Score: 38.891 bits (89), Expect = 1.553e-12
Identity = 16/43 (37.21%), Postives = 26/43 (60.47%), Query Frame = 1
Query:  181 GVGILGIAWAFGGMIFVLVYCXAGISGGHINPXXTFGLFLARQ 309
            G+G  G++ AFG  +  + +    ISG HINP  + GL+ A++
Sbjct:   35 GIGFAGVSLAFGLTLLTMAFAIGHISGCHINPAVSIGLWAAKR 77          
The following BLAST results are available for this feature:
BLAST of CF417870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
AQPZ_CHRVO1.139e-1334.34Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ P... [more]
AQPZ_RHOPA1.477e-1331.97Aquaporin Z OS=Rhodopseudomonas palustris GN=aqpZ ... [more]
AQP5_HUMAN2.261e-1334.51Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
TIP23_MAIZE2.490e-1337.84Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
TIP11_ORYSJ2.934e-1332.80Probable aquaporin TIP1-1 OS=Oryza sativa subsp. j... [more]
AQPA_RANES6.967e-1329.58Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP_CICVR7.081e-1331.40Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
TIP11_ARATH7.084e-1334.65Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
AQP_HAEIX1.195e-1230.51Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
AQPZ_GLOVI1.553e-1231.58Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-800 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-011_B01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417870 ID=CF417870; Name=CF417870; organism=Citrus sinensis; type=EST; length=705bp
ATTACCACGACCCTCCTCCAGCTCCATTGATCGATGCCGAGGAGCTCACC
CAATGGTCATTTTACAGGGCTACTATAGCTGAGTTCATCGCCACGCTCTT
GTTTTTGTACATTACTGTGCTGACAGTGATTGGTTACAAGAGCCAGACTG
ACGCCAACCACGGCGGTGATGAGATGTGGTGGTGTTGGCATTCTGGGCAT
CGCTTGGGCCTTTGGTGGCATGATCTTTGTTCTTGTTTACTGCNCTGCTG
GTATCTCTGGNGGACACATTAACCCGNCGGNGACATTTGGGCTGTTCTTG
GCGCGGCAAGGTGTCACTGGTGCGAGCCGTAATGTACATGGCTGGCTCAN
TGTTTGGGAGCCATATGTGGCTGCGGGCTCGTTAAGGCTTTCCAGAAGTC
TTACTACNCNANATACGGCGGNGGAGCCAATGAGCTCGCTGATGGGTACA
GCACTGGCACTGGATTGGGTGCTGAGATCATCGGTACCTTTGTTCTTGTC
TACACTGTTTTCTCCGCCACTGATCCCAAGAGANATGCTANGGACTCCCA
CGTTCCCGTCTTGGCGCCATTGCCNATTGGATTTGCTGTGTTCATGGTTC
ACTTGGCTACGATCCCTGTCACTGGAACTGGCATCNACCCCGCTAGAAGT
TTGGGAGCTGCAGTGATTTACAGCAAGGAGAAGGCTTGGGATGATCAATG
GATCT
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