CF417878

Overview
NameCF417878
Unique NameCF417878
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: ACSF1_THEEB (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 1 OS=Thermosynechococcus elongatus (strain BP-1) GN=acsF1 PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 1.487e-33
Identity = 46/77 (59.74%), Postives = 57/77 (74.03%), Query Frame = 2
Query:  428 RIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658
            R+F+EFLERSCTAEFSGFLLYKEL RRLK  NP +AE F+LMS   ++        ++DF  +LDLGFLT+ R YT+
Sbjct:   85 RLFIEFLERSCTAEFSGFLLYKELSRRLKDRNPLLAECFALMSRDEARHAGFLNKAMADFNLSLDLGFLTQHRSYTY 161          

HSP 2 Score: 68.9366 bits (167), Expect = 1.487e-33
Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = 1
Query:  193 QARKXNKTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429
            + R   K    ET+LTPR YTTDF+ M  +  TE     N AE EA+L+EF+ DYN+ HF R+ EF+++ D + G  R+
Sbjct:   12 ELRPGIKAPAKETILTPRFYTTDFEAMANMDITE-----NKAELEAILEEFRCDYNRHHFVRDEEFEQSWDHIDGETRR 85          
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: ACSF_PORPU (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Porphyra purpurea GN=acsF PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.019e-31
Identity = 47/76 (61.84%), Postives = 56/76 (73.68%), Query Frame = 2
Query:  431 IFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658
            +F+EFLERSCTAEFSGFLLYKEL R+LK +NP +AE F LMS   ++        + DF  +LDLGFLTK RKYTF
Sbjct:   77 LFIEFLERSCTAEFSGFLLYKELSRKLKDSNPIIAECFLLMSRDEARHAGFLNKAIGDFNLSLDLGFLTKTRKYTF 152          

HSP 2 Score: 60.4622 bits (145), Expect = 1.019e-31
Identity = 29/63 (46.03%), Postives = 40/63 (63.49%), Query Frame = 1
Query:  226 ETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQ 414
            ETLLTPR YTTDF+EM  +  +E     N  +F A+L+EF+ DYN  HF R  EF ++   ++
Sbjct:   14 ETLLTPRFYTTDFEEMASMNISE-----NEQDFFAILEEFRADYNSQHFIRGEEFNQSWSNLE 71          
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: ACSF_CYAME (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Cyanidioschyzon merolae GN=acsF PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.020e-31
Identity = 47/75 (62.67%), Postives = 54/75 (72.00%), Query Frame = 2
Query:  434 FVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658
            F EFLERSCTAEFSGFLLYKEL RRLK TNP +AE F  MS   ++        ++DF  +LDLGFLTK R+YTF
Sbjct:   76 FKEFLERSCTAEFSGFLLYKELSRRLKDTNPLLAEGFGYMSRDEARHAGFLNKAMADFGVSLDLGFLTKHRQYTF 150          

HSP 2 Score: 65.4698 bits (158), Expect = 1.020e-31
Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 1
Query:  226 ETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429
            +TLLTPR YTTDFD+M      +I+K  N AE EA++ EF+ DYNQTHF R+ EF +   +M    RQ
Sbjct:   12 QTLLTPRFYTTDFDQMAKY---DISK--NRAEIEAIVNEFRKDYNQTHFIRDDEFDQVWTQMPESKRQ 74          
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: ACSF_SYNPX (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Synechococcus sp. (strain WH8102) GN=acsF PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.250e-31
Identity = 43/77 (55.84%), Postives = 55/77 (71.43%), Query Frame = 2
Query:  428 RIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658
            R+FVEFLE+SCT+EFSGFLLYKEL RR+K+ NP +AE F+ M+   ++        +SDF   LDLGFLT  + YTF
Sbjct:   83 RVFVEFLEQSCTSEFSGFLLYKELSRRIKQQNPLLAECFAHMARDEARHAGFLNKAMSDFGMQLDLGFLTANKDYTF 159          

HSP 2 Score: 68.1662 bits (165), Expect = 2.250e-31
Identity = 33/73 (45.21%), Postives = 47/73 (64.38%), Query Frame = 1
Query:  211 KTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429
            K  + +T+LTPR YTTDFD+M  +     + + N AE EA+ +EF+ DYN+ HF RN +F  AADK+    R+
Sbjct:   16 KDPVKDTILTPRFYTTDFDDMAAM-----DLRPNEAELEAICEEFRKDYNRHHFVRNDDFDGAADKLDPETRR 83          
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: ACSF_PORYE (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Porphyra yezoensis GN=acsF PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.251e-31
Identity = 47/76 (61.84%), Postives = 56/76 (73.68%), Query Frame = 2
Query:  431 IFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658
            +F+EFLERSCTAEFSGFLLYKEL R+LK  NP +AE F LMS   ++        + DF  +LDLGFLTK+RKYTF
Sbjct:   77 LFIEFLERSCTAEFSGFLLYKELSRKLKDRNPVIAECFLLMSRDEARHAGFLNKAIGDFNLSLDLGFLTKSRKYTF 152          

HSP 2 Score: 59.6918 bits (143), Expect = 2.251e-31
Identity = 29/68 (42.65%), Postives = 43/68 (63.24%), Query Frame = 1
Query:  211 KTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQ 414
            +T+  ETLLTPR YTTDF+EM  +  +      N  +F A+L+EF+ DYN  HF R+ EF ++   ++
Sbjct:    9 QTSSKETLLTPRFYTTDFEEMANMDISG-----NQEDFLAILEEFRADYNSEHFIRDEEFNQSWSNLE 71          
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: ACSF_SYNPW (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Synechococcus sp. (strain WH7803) GN=acsF PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.429e-30
Identity = 43/77 (55.84%), Postives = 54/77 (70.13%), Query Frame = 2
Query:  428 RIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658
            R+FVEFLE+SCT+EFSGFLLYKEL RR+K  NP +AE F+ M+   ++        +SDF   LDLGFLT  + YTF
Sbjct:   87 RVFVEFLEQSCTSEFSGFLLYKELSRRIKTRNPLLAECFAHMARDEARHAGFLNKSMSDFGLQLDLGFLTANKSYTF 163          

HSP 2 Score: 65.855 bits (159), Expect = 1.429e-30
Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = 1
Query:  211 KTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429
            K    +T+LTPR YTTDF+ M  +     + + N AE EA+ +EF+ DYN+ HF RN EF+ AADK+    R+
Sbjct:   20 KDPAKDTILTPRFYTTDFEAMAAM-----DLRPNEAELEAICEEFRKDYNRHHFVRNDEFEGAADKLDPETRR 87          
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: ACSF_SYNS3 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Synechococcus sp. (strain CC9311) GN=acsF PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.422e-30
Identity = 43/77 (55.84%), Postives = 55/77 (71.43%), Query Frame = 2
Query:  428 RIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658
            ++FVEFLE+SCT+EFSGFLLYKEL RR+K  NP +AE FS M+   ++        +SDF   LDLGFLT ++ YTF
Sbjct:   87 KVFVEFLEQSCTSEFSGFLLYKELSRRIKTKNPLLAECFSHMARDEARHAGFLNKSMSDFGLQLDLGFLTSSKSYTF 163          

HSP 2 Score: 63.5438 bits (153), Expect = 2.422e-30
Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 1
Query:  211 KTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429
            K    +T+LTPR YTTDF+ M  +     + + N AE EA+ +EF+ DYN+ HF RN EF  AAD++    R+
Sbjct:   20 KDPAKDTILTPRFYTTDFEAMAAM-----DLRPNEAELEAICEEFRKDYNRHHFVRNGEFDGAADQLDPETRK 87          
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: ACSF_SYNSC (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Synechococcus sp. (strain CC9605) GN=acsF PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.422e-30
Identity = 41/77 (53.25%), Postives = 54/77 (70.13%), Query Frame = 2
Query:  428 RIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658
            ++F+EFLE+SCT+EFSGFLLYKEL RR+K  NP +AE F+ M+   ++        +SDF   LDLGFLT  + YTF
Sbjct:   83 KVFIEFLEQSCTSEFSGFLLYKELSRRIKAKNPLLAECFAHMARDEARHAGFLNKSMSDFGMQLDLGFLTANKDYTF 159          

HSP 2 Score: 67.0106 bits (162), Expect = 2.422e-30
Identity = 33/73 (45.21%), Postives = 47/73 (64.38%), Query Frame = 1
Query:  211 KTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429
            K  + +T+LTPR YTTDF+ M  +     + + N AE EA+ +EF+ DYN+ HF RN EF+ AADK+    R+
Sbjct:   16 KDPVKDTILTPRFYTTDFEAMAAM-----DLQPNEAELEAICEEFRKDYNRHHFVRNEEFEGAADKLDPETRK 83          
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: ACSF2_SYNY3 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 2 OS=Synechocystis sp. (strain PCC 6803) GN=acsF2 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.605e-29
Identity = 38/75 (50.67%), Postives = 53/75 (70.67%), Query Frame = 2
Query:  434 FVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658
            F++FLERSCT+EFSGFLL+KEL RRLK  +P +AE F L++   ++        ++DF  +LDL +LT+ R YTF
Sbjct:   87 FIDFLERSCTSEFSGFLLFKELSRRLKNRSPKLAEAFHLLARDEARHAGFINKAMADFGLSLDLRYLTQKRTYTF 161          

HSP 2 Score: 68.9366 bits (167), Expect = 2.605e-29
Identity = 37/84 (44.05%), Postives = 46/84 (54.76%), Query Frame = 1
Query:  175 LPLPKSQARKXNKTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLR 426
            LP      R   K  + ETLLTPR YTTDFD++  L  T     L   E EA L+E + DYN+ HF RN +FK + D + G  R
Sbjct:    6 LPTQLETIRPGIKAPVKETLLTPRFYTTDFDKVANLVLT-----LQDEEIEAALEELRADYNRYHFVRNDDFKRSFDHIDGATR 84          
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: ACSF_SYNR3 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Synechococcus sp. (strain RCC307) GN=acsF PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.392e-29
Identity = 42/77 (54.55%), Postives = 54/77 (70.13%), Query Frame = 2
Query:  428 RIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658
            R+FVEFLE+SCT+EFSGFLLYKEL RR+K+ NP +AE F+ M+   ++        + DF   LDLGFLT  + YTF
Sbjct:   87 RVFVEFLEQSCTSEFSGFLLYKELSRRIKQKNPLLAECFAHMARDEARHAGFLNKAMGDFGVQLDLGFLTANKAYTF 163          

HSP 2 Score: 62.3882 bits (150), Expect = 3.392e-29
Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 1
Query:  211 KTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429
            K  + +T+LTPR YTTDF+ M  +     + + N  E EA+ +EF+ DYN+ HF RN  F  AADK+    R+
Sbjct:   20 KDPVKDTILTPRFYTTDFEAMAAM-----DLRPNQEELEAICEEFRKDYNRHHFVRNEAFDGAADKLDPETRR 87          
The following BLAST results are available for this feature:
BLAST of CF417878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
ACSF1_THEEB1.487e-3359.74Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PORPU1.019e-3161.84Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_CYAME1.020e-3162.67Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_SYNPX2.250e-3155.84Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PORYE2.251e-3161.84Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_SYNPW1.429e-3055.84Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_SYNS32.422e-3055.84Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_SYNSC2.422e-3053.25Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF2_SYNY32.605e-2950.67Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_SYNR33.392e-2954.55Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-808 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-011_B09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417878 ID=CF417878; Name=CF417878; organism=Citrus sinensis; type=EST; length=660bp
CAGAAATGGACATCCTGAGATGTGTCACGTGCGANCAANCCNATTATNAT
ATTCGAGTCACCATCGGCCACCACTACTAAGCCTAGGTTCAGTNTACCCG
CAAAGTGACATGTACNTCTCTGAGCACTAGATNTTGTACNATCAAAATGT
CAGCAACTTCAGGGNAAGCGGCTGCTGCCACTGCCCAAAAGCCAAGCAAG
GAAATNNAACAAAACTGCTATCNAGGAGACCCTTCTGACGCCAAGGTNTT
ATACAACAGATTTTGATGAAATGGAGANCCTTTTCNACACTGAGATCAAC
AAGAAGCTCAACCANGCTGAATTTGAGGCATTGCTTCAAGAATTCAAGAC
TGATTATAACCAGACTCACTTTGNGAGGAACAANGAGTTCAAGGAAGCTG
CTGACAAGATGCAAGGCCCTCTCAGGCAGGATCTTTGTTGAGTTCTTGGA
GAGGTCTTGCACTGCTGAGTTCTCTGGTTTCCTTCTTTACAAAGAGCTCG
GAAGGAGACTCAAGAAAACCAACCCAGNGGTAGCTGAGATTTTCTCTCTG
ATGTCCAGNGGATGAAGCCAGGCATGCCGGGTTTCTGAACANGGGCTATC
TGATTTCNATTATGCATTGGACTTGGGCTTCCTGACAAAAGCTAGGAAAT
ACACATTTTT
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