CF417883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417883 vs. ExPASy Swiss-Prot
Match: MTNA_SYNSC (Methylthioribose-1-phosphate isomerase OS=Synechococcus sp. (strain CC9605) GN=mtnA PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.077e-36 Identity = 83/158 (52.53%), Postives = 103/158 (65.19%), Query Frame = 2 Query: 2 HSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 475 H+ G+L A+ ETRP QG+ L+A+EL +P LM+ G V AV+VG DRV+ANGD ANKIGTY+LAL A+ H I FYV AP +SID G+ I IEER A+E+ R G VAA G VWNPAFD+TPA+L+TG ITE GV+ Sbjct: 166 HARGLLRHAWLDETRPRLQGAALSAWELGCLGVPCTVIVDGASGLLMRRGEVDAVMVGCDRVSANGDVANKIGTYNLALVARAHGIPFYVCAPGSSIDRATVDGEAITIEERDAEEITHVR---GMDVAAPGAQVWNPAFDITPAHLVTGFITEFGVL 320
BLAST of CF417883 vs. ExPASy Swiss-Prot
Match: MTNA_HALHL (Methylthioribose-1-phosphate isomerase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=mtnA PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.325e-36 Identity = 79/163 (48.47%), Postives = 106/163 (65.03%), Query Frame = 2 Query: 5 SEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTKAGAD 493 ++G +ER + ETRP+ QGSRLTA+EL D IP LM+ G+V IVGADR+AANGD ANKIGTY++AL A+ H + V AP ++IDL +G++I IE R A+E+L + GG + + WNP FDVTPA L+ I+TE+GVV + AD Sbjct: 183 ADGRVERVFADETRPWLQGSRLTAWELAADGIPVDLLADGAAAALMRTGQVQWAIVGADRIAANGDVANKIGTYAVALAARQHGVRLMVVAPTSTIDLATPAGEQIPIETRDAREVLYA-GGRRIAPESEAVGAWNPVFDVTPAELVDVIVTERGVVHQPDAD 344
BLAST of CF417883 vs. ExPASy Swiss-Prot
Match: MTNA_DEHSC (Methylthioribose-1-phosphate isomerase OS=Dehalococcoides sp. (strain CBDB1) GN=mtnA PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.954e-36 Identity = 79/152 (51.97%), Postives = 101/152 (66.45%), Query Frame = 2 Query: 26 AYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTK 481 A+ +ETRP QG+RLTA EL +P MK G ++AV+VGADR+A NGDTANKIGTYSLA+ A H I FYVAAP ++ D ++ SG +IVIEER +E+ R G+++A I V NPAFDVTPANLI ITE G++ + Sbjct: 182 AFATETRPLLQGARLTALELKEAGVPFKLITDSMAGHFMKKGVINAVVVGADRIARNGDTANKIGTYSLAVLALAHGIPFYVAAPSSTFDKSIESGNDIVIEERKPEEITYLR---GQRIAPENIDVANPAFDVTPANLIAAFITENGIIRR 330
BLAST of CF417883 vs. ExPASy Swiss-Prot
Match: MTNA_DEHSB (Methylthioribose-1-phosphate isomerase OS=Dehalococcoides sp. (strain BAV1) GN=mtnA PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.954e-36 Identity = 79/152 (51.97%), Postives = 101/152 (66.45%), Query Frame = 2 Query: 26 AYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTK 481 A+ +ETRP QG+RLTA EL +P MK G ++AV+VGADR+A NGDTANKIGTYSLA+ A H I FYVAAP ++ D ++ SG +IVIEER +E+ R G+++A I V NPAFDVTPANLI ITE G++ + Sbjct: 182 AFATETRPLLQGARLTALELKEAGVPFKLITDSMAGHFMKKGVINAVVVGADRIARNGDTANKIGTYSLAVLALAHGIPFYVAAPSSTFDKSIESGNDIVIEERKPEEITYLR---GQRIAPENIDVANPAFDVTPANLIAAFITENGIIRR 330
BLAST of CF417883 vs. ExPASy Swiss-Prot
Match: EI2B1_PYRFU (Putative translation initiation factor eIF-2B subunit 1 OS=Pyrococcus furiosus GN=PF1349 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.954e-36 Identity = 81/158 (51.27%), Postives = 106/158 (67.09%), Query Frame = 2 Query: 2 HSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 475 H EG L+ + ETRP QG+RL+A+E +D + +M+ G+V A+IVGADR+ ANGD ANKIGTY LA+ AK H I F+ APL+SID++LSSG+EI IEERS +E+L G A + V+NPAFDVTP +TGIIT++GVV Sbjct: 188 HKEGTLKLLWLDETRPVLQGARLSAWEYSYDGLNVKLIADNAAAFVMQQGKVDAIIVGADRIVANGDFANKIGTYMLAVLAKEHGIPFFTVAPLSSIDMSLSSGKEIPIEERSPEEVLTCGGCR----IAPDVPVYNPAFDVTPHKYLTGIITDRGVV 341
BLAST of CF417883 vs. ExPASy Swiss-Prot
Match: MTNA_SYNP6 (Methylthioribose-1-phosphate isomerase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=mtnA PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.083e-36 Identity = 76/158 (48.10%), Postives = 102/158 (64.56%), Query Frame = 2 Query: 2 HSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 475 H +G AY ETRP QG+ L+AFEL +P LM+ ++ +VG DRV ANGD ANKIGTY+LAL AK H + FYVA P+++ID +L++G EI IEER +E+ R G+ +A +G WNPAFD+TPA L+T IITE+G++ Sbjct: 178 HEQGKQIHAYLDETRPRLQGANLSAFELQAYGVPHTVIVDGASGFLMRQQQIDCCLVGCDRVTANGDVANKIGTYNLALAAKAHGVPFYVACPISTIDRSLATGAEIEIEERDGREITEIR---GQAIAPAGTKTWNPAFDITPAELVTAIITERGIL 332
BLAST of CF417883 vs. ExPASy Swiss-Prot
Match: MTNA_SYNE7 (Methylthioribose-1-phosphate isomerase OS=Synechococcus elongatus (strain PCC 7942) GN=mtnA PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.083e-36 Identity = 76/158 (48.10%), Postives = 102/158 (64.56%), Query Frame = 2 Query: 2 HSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 475 H +G AY ETRP QG+ L+AFEL +P LM+ ++ +VG DRV ANGD ANKIGTY+LAL AK H + FYVA P+++ID +L++G EI IEER +E+ R G+ +A +G WNPAFD+TPA L+T IITE+G++ Sbjct: 178 HEQGKQIHAYLDETRPRLQGANLSAFELQAYGVPHTVIVDGASGFLMRQQQIDCCLVGCDRVTANGDVANKIGTYNLALAAKAHGVPFYVACPISTIDRSLATGAEIEIEERDGREITEIR---GQAIAPAGTKTWNPAFDITPAELVTAIITERGIL 332
BLAST of CF417883 vs. ExPASy Swiss-Prot
Match: MTNA_ACAM1 (Methylthioribose-1-phosphate isomerase OS=Acaryochloris marina (strain MBIC 11017) GN=mtnA PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.083e-36 Identity = 81/155 (52.26%), Postives = 99/155 (63.87%), Query Frame = 2 Query: 11 GVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLG-EQVAASGISVWNPAFDVTPANLITGIITEKGV 472 G L R Y ETRP QG++LT +E V + IP M+ + V+VGADR+AANGD ANKIGTYS+ALCAK HN+ FYVAAPL++ID L+ G I IEER E+ +G + G+ +NPAFDVTPA LITGIITE GV Sbjct: 189 GRLARVYADETRPRLQGAKLTTWECVQEEIPVTLISDGMAAHCMQQNLIDVVVVGADRIAANGDAANKIGTYSVALCAKAHNLPFYVAAPLSTIDFDLADGGGIPIEERHPSEIY----QIGTTDICPKGVEFYNPAFDVTPAELITGIITEHGV 339
BLAST of CF417883 vs. ExPASy Swiss-Prot
Match: MTNA_PSEMY (Methylthioribose-1-phosphate isomerase OS=Pseudomonas mendocina (strain ymp) GN=mtnA PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.186e-35 Identity = 80/160 (50.00%), Postives = 104/160 (65.00%), Query Frame = 2 Query: 2 HSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTK 481 H EG+LE Y ETRP+ QG+RLTA+EL D +P LMK ++ VIVGADR+ ANGD ANKIGTY LA+ A H + F V AP ++ID++L SG +I++EERS ELL G Q A+ + NP FDVTPA+L+ I+TEKGV+ + Sbjct: 187 HLEGLLEHVYVDETRPWLQGARLTAWELAGDGVPVSLNVDAAAAHLMKTKGITWVIVGADRITANGDVANKIGTYQLAVNAMHHGMRFMVVAPSSTIDMSLESGDDILLEERSGSELLEVAG----QPVAADVPAVNPVFDVTPADLVDYIVTEKGVIER 342
BLAST of CF417883 vs. ExPASy Swiss-Prot
Match: MTNA2_THELT (Methylthioribose-1-phosphate isomerase 2 OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=mtnA2 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.186e-35 Identity = 81/158 (51.27%), Postives = 103/158 (65.19%), Query Frame = 2 Query: 2 HSEGVLERAYCSETRPFNQGSRLTAFELVHDRIPXXXXXXXXXXXLMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 475 H G + ETRP QG+RL+A+E+ IP +MK ++ +VGADR+AANGDTANKIGTY+LA+ AK+HN+ YV AP ++IDL +GQ+I IEERSA E+ C QVA V+NPAFDVTPA LI+GIITEKG+V Sbjct: 176 HEIGKKIHVFLDETRPRLQGARLSAWEMKELGIPHTIIVDGASGLVMKKFKIDLALVGADRIAANGDTANKIGTYNLAIVAKYHNVPLYVVAPTSTIDLKTPAGQDIPIEERSADEIRCVG---NSQVAPQESPVFNPAFDVTPAELISGIITEKGIV 330 The following BLAST results are available for this feature:
BLAST of CF417883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417883 ID=CF417883; Name=CF417883; organism=Citrus sinensis; type=EST; length=672bpback to top |