CF417899

Overview
NameCF417899
Unique NameCF417899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 8.331e-34
Identity = 71/142 (50.00%), Postives = 97/142 (68.31%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHAS---DVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L ++ H N+VKL GC   ++   +LVYE++PNG +   L + + +  ++ W VRL IAIE A AL+YLH++    + HRD+K+ NILLD  ++VKV+DFG SR    D TH++T   GT GYVDP+YFQ  K TDKSDVYSF
Sbjct:  472 LAQINHRNIVKLLGCCL-ETEVPVLVYEFVPNGDLCKRLRD-ECDDYIMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTDKSDVYSF 611          

HSP 2 Score: 25.7942 bits (55), Expect = 8.331e-34
Identity = 17/66 (25.76%), Postives = 32/66 (48.48%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVDPSLGFEKDYAVRNMVTSVAEL 612
            +FGVVL+ELI+G       +   +   +   +  ++     ++VD  +   KD    + V +VA+L
Sbjct:  610 SFGVVLVELITGKNPSSRVQSEENRGFAAHFVAAVKENRFLDIVDERI---KDECNLDQVMAVAKL 672          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.841e-33
Identity = 69/142 (48.59%), Postives = 94/142 (66.20%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHAS---DVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L+++ H N+VKL GC   ++   +LVYEYIPNG +   LH+ + +   + W VRL IAIE A AL Y+H++    + HRD+K+ NILLD  +R KV+DFG SR    D TH++T   GT GY+DP+YF   + T KSDVYSF
Sbjct:  477 LSQINHRNIVKLLGCCL-ETEVPILVYEYIPNGDLFKRLHD-ESDDYTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSF 616          

HSP 2 Score: 29.261 bits (64), Expect = 1.841e-33
Identity = 18/66 (27.27%), Postives = 35/66 (53.03%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVDPSLGFEKDYAVRNMVTSVAEL 612
            +FGVVL+ELI+G + +   R      L+   +  ++   + +++D  +   KD +    V +VA+L
Sbjct:  615 SFGVVLVELITGEKPLSRVRSEEGRGLATHFLEAMKENRVIDIIDIRI---KDESKLEQVMAVAKL 677          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.276e-33
Identity = 68/143 (47.55%), Postives = 94/143 (65.73%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHASD----VIHRDVKSNNILLDNNFRVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L++++H +LV L G     S E++LVYE++  GT+ +HL+     S  L W  RL I I  A  L YLH+S     +IHRDVKS NILLD +   KVADFGLS++   D +++S   +GT GY+DP+Y Q +KLT+KSDVY+F
Sbjct:  536 LSRIRHRHLVSLTGYCEENS-EMILVYEFMEKGTLKEHLYGSNLPS--LTWKQRLEICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLDEHNIAKVADFGLSKIHNQDESNISINIKGTFGYLDPEYLQTHKLTEKSDVYAF 675          

HSP 2 Score: 38.1206 bits (87), Expect = 2.276e-33
Identity = 18/48 (37.50%), Postives = 29/48 (60.42%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVDPSL 558
            AFGVVL+E++    A+D      ++NLS   +     G ++E++DPSL
Sbjct:  674 AFGVVLLEVLFARPAIDPYLPHEEVNLSEWVMFCKSKGTIDEILDPSL 721          

HSP 3 Score: 21.1718 bits (43), Expect = 2.276e-33
Identity = 7/19 (36.84%), Postives = 15/19 (78.95%), Query Frame = 2
Query:  614 AFRCVQQDRDMRPTMKEVL 670
            A +C+++  D RP+M++V+
Sbjct:  737 AEKCLKEYGDERPSMRDVI 755          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 2.392e-33
Identity = 73/143 (51.05%), Postives = 98/143 (68.53%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHAS---DVIHRDVKSNNILLDNNFRVKVADFGLSRLFPT-DVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L+KL+H +LV L G    ++ E++LVY+Y+ +GT+ +HL+  Q  S  LPW  RL I I  A  L YLH      +IHRDVK+ NILLD  +  KV+DFGLS+  PT D THVST  +G+ GY+DP+YF+  +LT+KSDVYSF
Sbjct:  585 LSKLRHRHLVSLIGYCE-ENCEMILVYDYMAHGTMREHLYKTQNPS--LPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSF 724          

HSP 2 Score: 30.8018 bits (68), Expect = 2.392e-33
Identity = 15/48 (31.25%), Postives = 28/48 (58.33%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVDPSL 558
            +FGVVL E +    A++ +  +  ++L+  A    + G L+++VDP L
Sbjct:  723 SFGVVLFEALCARPALNPTLAKEQVSLAEWAPYCYKKGMLDQIVDPYL 770          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.449e-33
Identity = 75/143 (52.45%), Postives = 98/143 (68.53%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHASD---VIHRDVKSNNILLDNNFRVKVADFGLSRLFPT-DVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L ++ H NLV L G    Q+  L L+YEY+ NG +  HL  +    C+L W  RLSIA+ETA  L YLH+     ++HRDVKS NILLD +F+ K+ADFGLSR F   + +HVST   GTPGY+DP+Y++ Y+LT+KSDVYSF
Sbjct:  621 LLRVHHINLVSLVGYCDEQAH-LALIYEYMANGDLKSHLSGKH-GDCVLKWENRLSIAVETALGLEYLHSGCKPLMVHRDVKSMNILLDEHFQAKLADFGLSRSFSVGEESHVSTGVVGTPGYLDPEYYRTYRLTEKSDVYSF 761          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 5.283e-33
Identity = 68/143 (47.55%), Postives = 91/143 (63.64%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHAS---DVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTD-VTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L  + H NL    G      R + L+YEY+ NG + D+L +       L W  RL IAI++A  L YLH      ++HRDVK+ NILL++N   K+ADFGLS++FP D ++HV TA  GTPGYVDP+Y+  +KL +KSDVYSF
Sbjct:  628 LLTVHHRNLASFVGYCD-DGRSMALIYEYMANGNLQDYLSSENAED--LSWEKRLHIAIDSAQGLEYLHHGCRPPIVHRDVKTANILLNDNLEAKIADFGLSKVFPEDDLSHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYSF 767          

HSP 2 Score: 29.6462 bits (65), Expect = 5.283e-33
Identity = 14/48 (29.17%), Postives = 30/48 (62.50%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVDPSL 558
            +FG+VL+ELI+G +++  +     +N+ +     ++ G ++ +VDP L
Sbjct:  766 SFGIVLLELITGKRSIMKTDDGEKMNVVHYVEPFLKMGDIDGVVDPRL 813          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.960e-33
Identity = 66/143 (46.15%), Postives = 95/143 (66.43%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLH---ASDVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTD-VTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L+ +QH NLV L G  +   +++L VY ++ NG++ D L+       +L WP RLSIA+  A  LAYLH      VIHRDVKS+NILLD++   KVADFG S+  P +  ++VS   +GT GY+DP+Y++  +L++KSDV+SF
Sbjct:  643 LSAIQHENLVPLLGYCNEYDQQIL-VYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSF 784          

HSP 2 Score: 35.4242 bits (80), Expect = 8.960e-33
Identity = 17/48 (35.42%), Postives = 31/48 (64.58%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVDPSL 558
            +FGVVL+E++SG + ++  R R + +L   A   I+   ++E+VDP +
Sbjct:  783 SFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIRASKVDEIVDPGI 830          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 1.167e-32
Identity = 66/143 (46.15%), Postives = 94/143 (65.73%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLH---ASDVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTD-VTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L+ +QH NLV L G  +   +++L VY ++ NG++ D L+       +L WP RLSIA+  A  LAYLH      VIHRDVKS+NILLD +   KVADFG S+  P +  ++VS   +GT GY+DP+Y++  +L++KSDV+SF
Sbjct:  644 LSAIQHENLVPLLGYCNEYDQQIL-VYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSF 785          

HSP 2 Score: 35.4242 bits (80), Expect = 1.167e-32
Identity = 17/48 (35.42%), Postives = 31/48 (64.58%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVDPSL 558
            +FGVVL+E++SG + ++  R R + +L   A   I+   ++E+VDP +
Sbjct:  784 SFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRASKVDEIVDPGI 831          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.168e-32
Identity = 74/143 (51.75%), Postives = 95/143 (66.43%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLH---ASDVIHRDVKSNNILLDNNFRVKVADFGLSRLFPT-DVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L+KL+H +LV L G    +S E++LVYEY+ NG +  HL+        L W  RL I I  A  L YLH   +  +IHRDVK+ NILLD N   KVADFGLS+  P+ D THVSTA +G+ GY+DP+YF+  +LT+KSDVYSF
Sbjct:  558 LSKLRHRHLVSLIGYCDERS-EMILVYEYMANGPLRSHLYGADLPP--LSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSF 697          

HSP 2 Score: 29.6462 bits (65), Expect = 1.168e-32
Identity = 14/48 (29.17%), Postives = 30/48 (62.50%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVDPSL 558
            +FGVVL+E++    A++    R  +N++  A+   + G L++++D +L
Sbjct:  696 SFGVVLMEVLCCRPALNPVLPREQVNIAEWAMAWQKKGLLDQIMDSNL 743          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 1.170e-32
Identity = 69/142 (48.59%), Postives = 94/142 (66.20%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHAS---DVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L+++ H N+VKL GC   ++   +LVYEYIPNG +   LH+ + +   + W VRL IAIE A AL Y+H++    + HRD+K+ NILLD  +  KV+DFG SR    D TH++T   GT GY+DP+YF   + TDKSDVYSF
Sbjct:  480 LSQINHRNIVKLIGCCL-ETEVPILVYEYIPNGDMFKRLHD-ESDDYAMTWEVRLRIAIEIAGALTYMHSAASFPIYHRDIKTTNILLDEKYGAKVSDFGTSRSVTIDQTHLTTMVAGTFGYMDPEYFLSSQYTDKSDVYSF 619          

HSP 2 Score: 26.9498 bits (58), Expect = 1.170e-32
Identity = 16/66 (24.24%), Postives = 36/66 (54.55%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVDPSLGFEKDYAVRNMVTSVAEL 612
            +FGVVL+ELI+G + +   R      L+   +  ++   + +++D  +   K+ +  + + +VA+L
Sbjct:  618 SFGVVLVELITGEKPLSRIRSEEGRGLATHFLEAMKENRVIDIIDIRI---KEESKLDQLMAVAKL 680          
The following BLAST results are available for this feature:
BLAST of CF417899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
WAKLD_ARATH8.331e-3450.00Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
WAKLA_ARATH1.841e-3348.59Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
Y2232_ARATH2.276e-3347.55Probable receptor-like protein kinase At2g23200 OS... [more]
FERON_ARATH2.392e-3351.05Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
Y5169_ARATH4.449e-3352.45Probable LRR receptor-like serine/threonine-protei... [more]
Y4291_ARATH5.283e-3347.55Probable LRR receptor-like serine/threonine-protei... [more]
NORK_PEA8.960e-3346.15Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
NORK_MEDTR1.167e-3246.15Nodulation receptor kinase OS=Medicago truncatula ... [more]
THE1_ARATH1.168e-3251.75Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
WAKLE_ARATH1.170e-3248.59Wall-associated receptor kinase-like 5 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-829 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-011_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417899 ID=CF417899; Name=CF417899; organism=Citrus sinensis; type=EST; length=690bp
TTCTTACAAAGTTGCAGCATCCAAACCTTGTGAAATTATACGGATGCACA
TCAAGACAAAGCCGGGAGCTGCTCCTGGTTTATGAGTACATTCCCAATGG
AACAGTAGCAGATCATCTTCACAACAGGCAGCCGAACTCTTGCTTGCTCC
CTTGGCCTGTTCGTTTGAGCATTGCCATTGAAACAGCTGATGCACTTGCT
TACCTACATGCTTCAGATGTCATTCACCGCGATGTCAAATCCAACAACAT
TCTCTTGGACAACAATTTCCGTGTAAAGGTTGCAGATTTTGGGCTATCAA
GATTGTTTCCAACTGATGTTACACATGTCTCCACAGCTCCACAGGGGACC
CCTGGCTACGTTGATCCTGATTATTTCCAGTGCTACAAGCTCACTGACAA
GAGTGACGTGTACAGCTTTTGGGGTTGTTCTAATTGAGCTCATCTCAGGG
TTACAAGCTGTGGACACTAGTAGGCACCGGCATGATATAAACTTGTCTAA
CATGGCAATTAACAAGATTCAGAATGGCGCATTGAACGAGCTTGTTGATC
CATCTCTGGGGTTTGAAAAGGATTATGCAGTGAGAAACATGGTGACTTCA
GTGGCAGAATTGGGCTTTCAGGTGCGTGCAACAAGACAGAGACATGAGGC
CTACAATGAAAGAAGTGTTGGAGATTTTGAGGGAGACCAA
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