CF417899

Overview
NameCF417899
Unique NameCF417899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.117e-29
Identity = 60/139 (43.17%), Postives = 85/139 (61.15%), Query Frame = 3
Query:   12 LQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLH---ASDVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            ++H N+V L+G        LL  Y+Y+ NG++ D LH        L W  RL IA+  A  LAYLH      +IHRD+KS+NILLD NF  +++DFG+++  P   T+ ST   GT GY+DP+Y +  +L +KSD+YSF
Sbjct:  702 IRHRNIVSLHGYALSPFGNLLF-YDYMENGSLWDLLHG-PGKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDGNFEARLSDFGIAKSIPATKTYASTYVLGTIGYIDPEYARTSRLNEKSDIYSF 838          

HSP 2 Score: 34.2686 bits (77), Expect = 1.117e-29
Identity = 17/45 (37.78%), Postives = 29/45 (64.44%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVD 549
            +FG+VL+EL++G +AVD     ++ NL  M ++K  +  + E VD
Sbjct:  837 SFGIVLLELLTGKKAVD-----NEANLHQMILSKADDNTVMEAVD 876          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.294e-29
Identity = 67/143 (46.85%), Postives = 90/143 (62.94%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYG-CTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHASD--VIHRDVKSNNILLDNNFRVKVADFGLSRLFPT-DVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L +L HPNLVKL G C   + R  LLVYE++  G++ +HL  R      L W  R+ +A+  A  LA+LH +   VI+RD K++NILLD+N+  K++DFGL+R  P  D +HVST   GT GY  P+Y     L+ KSDVYSF
Sbjct:  126 LGQLDHPNLVKLIGYCLEEEHR--LLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLHNAQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSF 266          

HSP 2 Score: 31.187 bits (69), Expect = 1.294e-29
Identity = 19/49 (38.78%), Postives = 31/49 (63.27%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQN-GALNELVDPSL 558
            +FGVVL+EL+SG +A+D ++   + NL + A   + N   L  ++DP L
Sbjct:  265 SFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRL 313          

HSP 3 Score: 24.6386 bits (52), Expect = 1.294e-29
Identity = 9/24 (37.50%), Postives = 14/24 (58.33%), Query Frame = 2
Query:  614 AFRCVQQDRDMRPTMKEVLEILRE 685
            A  C+  D   RPTM E+++ + E
Sbjct:  329 ALDCISIDAKSRPTMNEIVKTMEE 352          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.340e-29
Identity = 69/142 (48.59%), Postives = 96/142 (67.61%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHASD---VIHRDVKSNNILLDNNFRVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            ++ +QH NLVKL GC S +  E LLVYEY+PN ++   L + +  S +L W  RL+I + TA+ LAYLH      +IHRD+K++N+LLD+    K+ADFGL+R F  D TH+ST   GT GY+ P+Y    +LT+K+DVYSF
Sbjct:  363 ISGIQHKNLVKLLGC-SIEGPESLLVYEYVPNKSLDQFLFD-ESQSKVLNWSQRLNIILGTAEGLAYLHGGSPVRIIHRDIKTSNVLLDDQLNPKIADFGLARCFGLDKTHLSTGIAGTLGYMAPEYVVRGQLTEKADVYSF 502          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 122.479 bits (306), Expect = 1.453e-29
Identity = 70/143 (48.95%), Postives = 85/143 (59.44%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYG-CTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHAS---DVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L++ QHPNLV L G C  +  R  LL+Y Y+ NG++   LH R     LL W  RL IA   A  L YLH      ++HRD+KS+NILLD NF   +ADFGL+RL     THVST   GT GY+ P+Y Q    T K DVYSF
Sbjct:  782 LSRAQHPNLVLLRGFCFYKNDR--LLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVSTDLVGTLGYIPPEYGQASVATYKGDVYSF 922          

HSP 2 Score: 26.5646 bits (57), Expect = 1.453e-29
Identity = 13/46 (28.26%), Postives = 25/46 (54.35%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVDP 552
            +FGVVL+EL++  + VD  + +   +L +  +        +E+ DP
Sbjct:  921 SFGVVLLELLTDKRPVDMCKPKGCRDLISWVVKMKHESRASEVFDP 966          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.750e-29
Identity = 72/143 (50.35%), Postives = 94/143 (65.73%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHA---SDVIHRDVKSNNILLDNNFRVKVADFGLSRLF-PTDVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L+++ H N+VKL G    Q +E +LVYEYIPNG++ D L  +  N   L W  RL IA+ +   LAYLH      +IHRDVKSNNILLD +   KVADFGLS+L    +  HV+T  +GT GY+DP+Y+   +LT+KSDVY F
Sbjct:  682 LSRVHHKNVVKLLGFCFDQ-KEQMLVYEYIPNGSLRDGLSGK--NGVKLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGF 821          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 2.136e-29
Identity = 64/143 (44.76%), Postives = 90/143 (62.94%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHAS---DVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTD-VTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L ++ H +LV L G        L L+YEY+ NG + +++  ++  + +L W  R+ IA+E A  L YLH      ++HRDVK+ NILL+     K+ADFGLSR FP D   HVST   GTPGY+DP+Y++   L++KSDVYSF
Sbjct:  631 LLRVHHRHLVGLVGYCD-DGDNLALIYEYMANGDLRENMSGKRGGN-VLTWENRMQIAVEAAQGLEYLHNGCRPPMVHRDVKTTNILLNERCGAKLADFGLSRSFPIDGECHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSF 771          

HSP 2 Score: 31.5722 bits (70), Expect = 2.136e-29
Identity = 16/48 (33.33%), Postives = 27/48 (56.25%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVDPSL 558
            +FGVVL+E+++    +D +R R  IN  +     +  G +  +VDP L
Sbjct:  770 SFGVVLLEIVTNQPVIDKTRERPHIN--DWVGFMLTKGDIKSIVDPKL 815          

HSP 3 Score: 20.4014 bits (41), Expect = 2.136e-29
Identity = 9/24 (37.50%), Postives = 12/24 (50.00%), Query Frame = 2
Query:  614 AFRCVQQDRDMRPTMKEVLEILRE 685
            A  CV    + RPTM  V+  L +
Sbjct:  831 ALACVNPSSNRRPTMAHVVMELND 854          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: Y1570_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g05700 OS=Arabidopsis thaliana GN=At1g05700 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.468e-29
Identity = 65/143 (45.45%), Postives = 91/143 (63.64%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHAS---DVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTDV-THVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L ++ H NL  L G    +  ++ L+YE++ NG +ADHL  +  ++  L W  RL IA++ A  L YLH      ++HRDVK++NILL+   R K+ADFGLSR F T+  +HVST   GTPGY+DP  F+   L +KSD+YSF
Sbjct:  617 LVRVHHVNLTALIGYF-HEGDQMGLIYEFMANGNMADHLAGKYQHT--LSWRQRLQIALDAAQGLEYLHCGCKPPIVHRDVKTSNILLNEKNRAKLADFGLSRSFHTESRSHVSTLVAGTPGYLDPLCFETNGLNEKSDIYSF 756          

HSP 2 Score: 30.0314 bits (66), Expect = 2.468e-29
Identity = 21/67 (31.34%), Postives = 41/67 (61.19%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQN-GALNELVDPSLGFEKDYAVRNMVTSVAEL 612
            +FGVVL+E+I+G   +  S+ +  +++S+  I+ +++   +N ++D  +   KD+ V N V  V EL
Sbjct:  755 SFGVVLLEMITGKTVIKESQTKR-VHVSDWVISILRSTNDVNNVIDSKMA--KDFDV-NSVWKVVEL 817          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.809e-29
Identity = 59/142 (41.55%), Postives = 91/142 (64.08%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLH---ASDVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L  ++HPNLV L G  + ++ E+ L+Y Y+  G + D +  R  +   + W V   IA++ A AL+YLH   +  V+HRD+K +NILLDNN+   ++DFGLS+L  T  +HV+T   GT GYV P+Y    ++++K+DVYS+
Sbjct:  309 LEMVRHPNLVMLIGYHASET-EMFLIYNYLSGGNLQDFIKER--SKAAIEWKVLHKIALDVARALSYLHEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSKLLGTSQSHVTTGVAGTFGYVAPEYAMTCRVSEKADVYSY 447          

HSP 2 Score: 28.8758 bits (63), Expect = 2.809e-29
Identity = 16/50 (32.00%), Postives = 27/50 (54.00%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDT--SRHRHDINLSNMAINKIQNGALNELVDPSL 558
            ++G+VL+ELIS  +A+D   S H +  N+ + A   +  G   E+    L
Sbjct:  446 SYGIVLLELISDKRALDPSFSSHENGFNIVSWAHMMLSQGKAKEVFTTGL 495          

HSP 3 Score: 23.8682 bits (50), Expect = 2.809e-29
Identity = 8/23 (34.78%), Postives = 14/23 (60.87%), Query Frame = 2
Query:  614 AFRCVQQDRDMRPTMKEVLEILR 682
            A +C      +RPTMK+ + +L+
Sbjct:  511 ALKCTVDSLSIRPTMKQAVRLLK 533          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.984e-29
Identity = 69/144 (47.92%), Postives = 91/144 (63.19%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYG-CTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHAS---DVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTD-VTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L ++ H NLV L G C  R    L L+YE++P G +  HL  +   S  + W  RL IA+E A  L YLH+     ++HRD+K+ NILLD   + K+ADFGLSR FP    TH+ST   GTPGY+DP+Y+Q  +L +KSDVYSF
Sbjct:  627 LLRVHHTNLVSLVGYCDERD--HLALIYEFLPKGDLRQHLSGKSGGS-FINWGNRLRIALEAALGLEYLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGETHISTVVAGTPGYLDPEYYQTTRLGEKSDVYSF 767          
BLAST of CF417899 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.206e-29
Identity = 65/142 (45.77%), Postives = 87/142 (61.27%), Query Frame = 3
Query:    3 LTKLQHPNLVKLYGCTSRQSRELLLVYEYIPNGTVADHLHNRQPNSCLLPWPVRLSIAIETADALAYLHAS---DVIHRDVKSNNILLDNNFRVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPDYFQCYKLTDKSDVYSF 419
            L++ QHPNLV L G  + ++ + LL+Y Y+ NG++   LH +      L W  RL IA   A+ LAYLH S    ++HRD+KS+NILL + F   +ADFGL+RL     THV+T   GT GY+ P+Y Q    T K DVYSF
Sbjct:  791 LSRAQHPNLVHLLGYCNYKN-DKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSF 931          

HSP 2 Score: 32.7278 bits (73), Expect = 3.206e-29
Identity = 17/55 (30.91%), Postives = 33/55 (60.00%), Query Frame = 1
Query:  415 AFGVVLIELISGLQAVDTSRHRHDINLSNMAINKIQNGALNELVDPSLGFEKDYA 579
            +FGVVL+EL++G + +D  + R   +L +  +        +E+ DP + ++KD+A
Sbjct:  930 SFGVVLLELLTGRRPMDVCKPRGSRDLISWVLQMKTEKRESEIFDPFI-YDKDHA 983          
The following BLAST results are available for this feature:
BLAST of CF417899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ERL2_ARATH1.117e-2943.17LRR receptor-like serine/threonine-protein kinase ... [more]
NAK_ARATH1.294e-2946.85Probable serine/threonine-protein kinase NAK OS=Ar... [more]
CRK42_ARATH1.340e-2948.59Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
PSKR1_ARATH1.453e-2948.95Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
Y5977_ARATH1.750e-2950.35Probable leucine-rich repeat receptor-like protein... [more]
Y1518_ARATH2.136e-2944.76Probable LRR receptor-like serine/threonine-protei... [more]
Y1570_ARATH2.468e-2945.45Probable LRR receptor-like serine/threonine-protei... [more]
RPK1_ARATH2.809e-2941.55Probable LRR receptor-like serine/threonine-protei... [more]
PAM74_ARATH2.984e-2947.92Probable LRR receptor-like serine/threonine-protei... [more]
PSKR1_DAUCA3.206e-2945.77Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-829 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-011_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417899 ID=CF417899; Name=CF417899; organism=Citrus sinensis; type=EST; length=690bp
TTCTTACAAAGTTGCAGCATCCAAACCTTGTGAAATTATACGGATGCACA
TCAAGACAAAGCCGGGAGCTGCTCCTGGTTTATGAGTACATTCCCAATGG
AACAGTAGCAGATCATCTTCACAACAGGCAGCCGAACTCTTGCTTGCTCC
CTTGGCCTGTTCGTTTGAGCATTGCCATTGAAACAGCTGATGCACTTGCT
TACCTACATGCTTCAGATGTCATTCACCGCGATGTCAAATCCAACAACAT
TCTCTTGGACAACAATTTCCGTGTAAAGGTTGCAGATTTTGGGCTATCAA
GATTGTTTCCAACTGATGTTACACATGTCTCCACAGCTCCACAGGGGACC
CCTGGCTACGTTGATCCTGATTATTTCCAGTGCTACAAGCTCACTGACAA
GAGTGACGTGTACAGCTTTTGGGGTTGTTCTAATTGAGCTCATCTCAGGG
TTACAAGCTGTGGACACTAGTAGGCACCGGCATGATATAAACTTGTCTAA
CATGGCAATTAACAAGATTCAGAATGGCGCATTGAACGAGCTTGTTGATC
CATCTCTGGGGTTTGAAAAGGATTATGCAGTGAGAAACATGGTGACTTCA
GTGGCAGAATTGGGCTTTCAGGTGCGTGCAACAAGACAGAGACATGAGGC
CTACAATGAAAGAAGTGTTGGAGATTTTGAGGGAGACCAA
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