CF417950

Overview
NameCF417950
Unique NameCF417950
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 3.723e-67
Identity = 111/175 (63.43%), Postives = 135/175 (77.14%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527
            P K+QAVALR+GAD +    C + AYQDTLY H+ RQF+ +  I GTVDFIFGNAA V QNC++  RK   GQ+N +TAQGR DPNQNTG  IQ   I A++DL+PV+ +F +YLGRPWKEYSRTV+M+S I+DVI PAGW EWD +FAL TLFYGE++N G G+GTS RVKW G
Sbjct:  333 PEKYQAVALRIGADETVINRCRIDAYQDTLYPHNYRQFYRDRNITGTVDFIFGNAAVVFQNCNLIPRKQMKGQENTITAQGRTDPNQNTGTSIQNCEIFASADLEPVEDTFKSYLGRPWKEYSRTVVMESYISDVIDPAGWLEWDRDFALKTLFYGEYRNGGPGSGTSERVKWPG 507          

HSP 2 Score: 41.5874 bits (96), Expect = 3.723e-67
Identity = 19/37 (51.35%), Postives = 23/37 (62.16%), Query Frame = 1
Query:  526 GFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636
            G+ VITS   A+ FT    I G SWLGSTG  ++ GL
Sbjct:  507 GYHVITSPEVAEQFTVAELIQGGSWLGSTGVDYTAGL 543          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 1.830e-66
Identity = 116/175 (66.29%), Postives = 133/175 (76.00%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527
            P+KHQAVALRV AD +    C + AYQDTLY H+ RQF+ +  I GTVDFIFGN+A V QNCDI AR P +GQKNM+TAQGR D NQNT I IQK +I A+SDL PV+GS  T+LGRPWK YSRTVIMQS I + I PAGW  WDG FAL+TL+YGE+ N G GA TS RV WKG
Sbjct:  347 PAKHQAVALRVSADQTVINRCRIDAYQDTLYTHTLRQFYRDSYITGTVDFIFGNSAVVFQNCDIVARNPGAGQKNMLTAQGREDQNQNTAISIQKCKITASSDLAPVKGSVKTFLGRPWKLYSRTVIMQSFIDNHIDPAGWFPWDGEFALSTLYYGEYANTGPGADTSKRVNWKG 521          

HSP 2 Score: 35.4242 bits (80), Expect = 1.830e-66
Identity = 16/36 (44.44%), Postives = 20/36 (55.56%), Query Frame = 1
Query:  517 NGRGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPF 624
            N +GF+VI  + EA+ FT    I G  WL  TG  F
Sbjct:  518 NWKGFKVIKDSKEAEQFTVAKLIQGGLWLKPTGVTF 553          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5)

HSP 1 Score: 237.269 bits (604), Expect = 1.831e-66
Identity = 115/175 (65.71%), Postives = 132/175 (75.43%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527
            P+K QAVALRVGAD+S    C + AYQDTLY HS RQF+ +  + GTVDFIFGNAA V Q C + ARKP   Q+NMVTAQGR DPNQ TG  IQ   I A+SDL+PV   FPTYLGRPWKEYSRTV+M+S +  +I+PAGW EWDG+FAL TL+YGE  N G GAGTS RVKW G
Sbjct:  334 PAKDQAVALRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKEYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPG 508          

HSP 2 Score: 35.4242 bits (80), Expect = 1.831e-66
Identity = 17/37 (45.95%), Postives = 20/37 (54.05%), Query Frame = 1
Query:  526 GFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636
            G+ VIT   +A  FT    I G SWL STG  +  GL
Sbjct:  508 GYHVITDPAKAMPFTVAKLIQGGSWLRSTGVAYVDGL 544          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 3.113e-66
Identity = 114/175 (65.14%), Postives = 132/175 (75.43%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527
            P+KHQAVALRVGAD S    C + AYQDTLY HS RQF+ +  + GT+DFIFGNAA V Q C + ARKP   Q+NMVTAQGR DPNQ TG  IQ   I A+SDL+PV   FPTYLGRPWK+YSRTV+M+S +  +I+PAGW EWDG+FAL TL+YGE  N G GAGTS RVKW G
Sbjct:  338 PAKHQAVALRVGADKSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCKLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKKYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPG 512          

HSP 2 Score: 35.039 bits (79), Expect = 3.113e-66
Identity = 17/37 (45.95%), Postives = 19/37 (51.35%), Query Frame = 1
Query:  526 GFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636
            G+  IT   EA  FT    I G SWL STG  +  GL
Sbjct:  512 GYHCITDPAEAMPFTVAKLIQGGSWLRSTGVAYVDGL 548          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2)

HSP 1 Score: 249.98 bits (637), Expect = 8.269e-66
Identity = 127/205 (61.95%), Postives = 147/205 (71.71%), Query Frame = 3
Query:    6 SKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGI*GYYKCYRGSSFYSWKLHCW**LAGLHWFP 620
            S  QAVALR G+DLS FY C   AYQDTLYVHSNRQF+ +C + GTVDFIFGNAAAVLQNC+I AR+P S + N +TAQGR+DPNQNTGI+I  SR+ A SDL+PV GS  TYLGRPW++YSRTV M++S+  +I P GW EWDGNFAL TLFY E QN G GA TSGRV W G         GS+  + K      LAG  W P
Sbjct:  304 SNEQAVALRSGSDLSVFYQCSFEAYQDTLYVHSNRQFYRDCDVYGTVDFIFGNAAAVLQNCNIFARRPRS-KTNTITAQGRSDPNQNTGIIIHNSRVTAASDLRPVLGSTKTYLGRPWRQYSRTVFMKTSLDSLIDPRGWLEWDGNFALKTLFYAEFQNTGPGASTSGRVTWPGF-----RVLGSASEASKFTVGTFLAGGSWIP 502          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2)

HSP 1 Score: 231.491 bits (589), Expect = 1.279e-64
Identity = 112/175 (64.00%), Postives = 129/175 (73.71%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527
            P+KHQAVALRVGAD S    C + AYQDTLY HS RQF+ +  + GT+DFIFGNAA V Q C + ARKP   Q+NMVTAQGR DPNQ TG  IQ   I A+ DLKPV   FPTYLGRPWK+YSRTV+M+S +  +I P+GW EW G+FAL TL+YGE  N G GAGTS RVKW G
Sbjct:  338 PAKHQAVALRVGADKSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCDIIASPDLKPVVKEFPTYLGRPWKKYSRTVVMESYLGGLIDPSGWAEWHGDFALKTLYYGEFMNNGPGAGTSKRVKWPG 512          

HSP 2 Score: 35.039 bits (79), Expect = 1.279e-64
Identity = 17/37 (45.95%), Postives = 20/37 (54.05%), Query Frame = 1
Query:  526 GFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636
            G+ VIT   EA +FT    I G SWL ST   +  GL
Sbjct:  512 GYHVITDPAEAMSFTVAKLIQGGSWLRSTDVAYVDGL 548          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME36_ARATH (Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana GN=PME36 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.176e-64
Identity = 105/175 (60.00%), Postives = 129/175 (73.71%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527
            P KHQAVALRV +DLS FY C    YQDTL+ HS RQF+ +  I GT+DFIFG+AAAV QNCDI  R+P   Q NM+TAQGR DP+ N+GI IQ SRI A  + + V+G F +YLGRPWK+YSRTV +++ I ++I P GW EW G++AL+TL+YGE  N GAGAGT  RV W G
Sbjct:  309 PHKHQAVALRVSSDLSLFYRCSFKGYQDTLFTHSLRQFYRDRHIYGTIDFIFGDAAAVFQNCDIFVRRPMDHQGNMITAQGRDDPHTNSGISIQHSRIRAAPEFEAVKGRFKSYLGRPWKKYSRTVFLKTDIDELIDPRGWREWSGSYALSTLYYGEFMNTGAGAGTGRRVNWPG 483          

HSP 2 Score: 40.817 bits (94), Expect = 2.176e-64
Identity = 19/40 (47.50%), Postives = 22/40 (55.00%), Query Frame = 1
Query:  517 NGRGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636
            N  GF V+    EA  FT   FI G SW+  TG PFS G+
Sbjct:  480 NWPGFHVLRGEEEASPFTVSRFIQGDSWIPITGVPFSAGV 519          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 6.289e-64
Identity = 112/175 (64.00%), Postives = 127/175 (72.57%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527
            P K QAVALRVGAD+S    C + AYQDTLY HS RQF+ +  + GTVDFIFGNAA V Q C I ARKPN  QKNMVTAQGR DPNQ TG  IQ   I A+ DL+PV   + TYLGRPWK++SRTV+MQS +   I P+GW EW G+FAL TL+YGE  N G GAGTS RVKW G
Sbjct:  332 PEKDQAVALRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQIVARKPNKRQKNMVTAQGRTDPNQATGTSIQFCDIIASPDLEPVMNEYKTYLGRPWKKHSRTVVMQSYLDGHIDPSGWFEWRGDFALKTLYYGEFMNNGPGAGTSKRVKWPG 506          

HSP 2 Score: 35.8094 bits (81), Expect = 6.289e-64
Identity = 17/37 (45.95%), Postives = 19/37 (51.35%), Query Frame = 1
Query:  526 GFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636
            G+ VIT   EA  FT    I G SWL ST   +  GL
Sbjct:  506 GYHVITDPNEAMPFTVAELIQGGSWLNSTSVAYVEGL 542          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.368e-62
Identity = 110/176 (62.50%), Postives = 129/176 (73.30%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQ-GSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527
            P KHQAVALR  +DLS FY C++  YQDTLY H+ RQF+ +C I+GTVDFIFG+A  V QNC I A+K    QKN +TAQGR DPN+ TGI IQ   I A SDL+     S PTYLGRPWK YSRTVIMQS +++VI P GW EW+G+FALN+LFYGE+ N G GAG   RVKW G
Sbjct:  309 PEKHQAVALRSDSDLSVFYRCNIRGYQDTLYTHTMRQFYRDCKISGTVDFIFGDATVVFQNCQILAKKGLPNQKNSITAQGRKDPNEPTGISIQFCNITADSDLEAASVNSTPTYLGRPWKLYSRTVIMQSFLSNVIRPEGWLEWNGDFALNSLFYGEYMNYGPGAGLGSRVKWPG 484          

HSP 2 Score: 33.4982 bits (75), Expect = 3.368e-62
Identity = 13/34 (38.24%), Postives = 22/34 (64.71%), Query Frame = 1
Query:  526 GFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFS 627
            G++V   +T+A+ +T   FI G+ WL STG  ++
Sbjct:  484 GYQVFNESTQAKNYTVAQFIEGNLWLPSTGVKYT 517          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 4.390e-62
Identity = 103/175 (58.86%), Postives = 123/175 (70.29%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527
            P+K QAVALR G DLS FY+C   AYQDTLY HS RQF+  C + GTVDFIFGNAA VLQNC+++ R+P  GQ N VTAQGR DPNQNTG  I    I    DL     +  TYLGRPWKEYSRTV+MQ+ I   + P+GW+ W G+FAL+TL+Y E+ N G G+ T+ RV W G
Sbjct:  349 PTKGQAVALRSGGDLSVFYSCSFEAYQDTLYTHSLRQFYRECDVYGTVDFIFGNAAVVLQNCNLYPRQPRKGQSNEVTAQGRTDPNQNTGTAIHGCTIRPADDLATSNYTVKTYLGRPWKEYSRTVVMQTYIDGFLEPSGWNAWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPG 523          

HSP 2 Score: 38.1206 bits (87), Expect = 4.390e-62
Identity = 18/37 (48.65%), Postives = 24/37 (64.86%), Query Frame = 1
Query:  526 GFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636
            G+ VI +AT+A  FT  +F+ G  W+G TG PF  GL
Sbjct:  523 GYHVI-NATDASNFTVTNFLVGEGWIGQTGVPFVGGL 558          
The following BLAST results are available for this feature:
BLAST of CF417950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PME1_FICAW3.723e-6763.43Pectinesterase/pectinesterase inhibitor OS=Ficus a... [more]
PME18_ARATH1.830e-6666.29Pectinesterase/pectinesterase inhibitor 18 OS=Arab... [more]
PME1_SOLLC1.831e-6665.71Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9... [more]
PME22_SOLLC3.113e-6665.14Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2... [more]
PME17_ARATH8.269e-6661.95Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME21_SOLLC1.279e-6464.00Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2... [more]
PME36_ARATH2.176e-6460.00Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME3_SOLLC6.289e-6464.00Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 P... [more]
PME_PRUPE3.368e-6262.50Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME20_ARATH4.390e-6258.86Probable pectinesterase/pectinesterase inhibitor 2... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-880 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-012_A02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417950 ID=CF417950; Name=CF417950; organism=Citrus sinensis; type=EST; length=665bp
GCCCCTCAAAGCACCAGGCGGTGGCACTACGAGTGGGAGCTGACCTTTCA
GCATTTTACAATTGCGATATGTTAGCTTACCAAGACACACTCTACGTCCA
CTCGAACCGCCAGTTCTTTGTGAACTGCTTAATTGCTGGCACGGTTGATT
TTATTTTTGGTAACGCTGCAGCCGTGTTACAAAATTGTGACATCCATGCA
CGAAAGCCCAATTCCGGCCAAAAAAATATGGTCACAGCCCAAGGCAGGGC
TGACCCTAACCAAAACACCGGCATTGTCATTCAAAAATCTAGGATTGGTG
CCACCTCCGATTTAAAACCGGTTCAGGGTAGTTTCCCGACGTACCTCGGC
AGGCCCTGGAAGGAGTACTCGAGGACGGTGATCATGCAGTCATCGATTAC
TGACGTGATCCACCCTGCCGGGTGGCACGAGTGGGATGGTAACTTCGCGT
TGAACACATTGTTTTACGGAGAGCATCAGAACGCCGGAGCCGGTGCCGGA
ACTTCAGGGAGAGTGAAATGGAAGGGGATTTAGGGTTATTACAAGTGCTA
CCGAGGCTCAAGCTTTTACTCCTGGAAGCTTCATTGCTGGTAGTAGCTGG
CTGGGCTCCACTGGTTTCCCATTCTCCCTTGGTTTGTAATATTCACTAGG
AGTTTTAATTAATAT
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