CF417950

Overview
NameCF417950
Unique NameCF417950
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.779e-57
Identity = 97/175 (55.43%), Postives = 127/175 (72.57%), Query Frame = 3
Query:    6 SKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGI 530
            ++HQAVALRV AD + F+NC M  YQDTLYVH++RQF+ NC ++GT+DF+FG+A AV QNC+   R+P   Q+ +VTAQGR D  + TGIVI  SRI   +   PV+     +LGRPWKE+SRT+IM + I DVI P GW +W+  FALNTLFY E++N G G+G   RV+W+GI
Sbjct:  494 ARHQAVALRVSADFAVFFNCHMNGYQDTLYVHTHRQFYRNCRVSGTIDFVFGDAKAVFQNCEFVIRRPMEHQQCIVTAQGRKDRRETTGIVIHNSRITGDASYLPVKAKNRAFLGRPWKEFSRTIIMNTEIDDVIDPEGWLKWNETFALNTLFYTEYRNRGRGSGQGRRVRWRGI 668          

HSP 2 Score: 30.0314 bits (66), Expect = 1.779e-57
Identity = 12/35 (34.29%), Postives = 22/35 (62.86%), Query Frame = 1
Query:  523 RGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFS 627
            RG + I+    A+ F PG+F+ G++W+  T  P++
Sbjct:  666 RGIKRISDRA-AREFAPGNFLRGNTWIPQTRIPYN 699          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 1.783e-57
Identity = 104/175 (59.43%), Postives = 121/175 (69.14%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527
            P   QAVALRV +D SAFY C +  YQDTLY HS RQF+ +C I GT+DFIFGN AAVLQNC I+ R P   QK  +TAQGR  PNQNTG VIQ S + AT          PTYLGRPWK YSRTV M + ++ ++ P GW EW GNFAL+TL+YGE+ N G G  +SGRVKW G
Sbjct:  341 PQNRQAVALRVDSDQSAFYRCSVEGYQDTLYAHSLRQFYRDCEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPNQNTGFVIQNSYVLATQ---------PTYLGRPWKLYSRTVYMNTYMSQLVQPRGWLEWFGNFALDTLWYGEYNNIGPGWRSSGRVKWPG 506          

HSP 2 Score: 34.2686 bits (77), Expect = 1.783e-57
Identity = 17/37 (45.95%), Postives = 23/37 (62.16%), Query Frame = 1
Query:  526 GFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636
            G+ ++   T A +FT GSFI G  WL +TG  F+ GL
Sbjct:  506 GYHIMDKRT-ALSFTVGSFIDGRRWLPATGVTFTAGL 541          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.666e-56
Identity = 102/176 (57.95%), Postives = 128/176 (72.73%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGI 530
            P  HQAVALRV ADL+ FYNC +  YQDTLYVHS+RQFF +C ++GTVDFIFG+   VLQNC+I  RKP   Q  M+TAQGR+D  ++TG+V+Q   I       PV+     YLGRPWKE+SRT+IM ++I DVI PAGW  W+G+FALNTL+Y E++N G G+  + RVKW GI
Sbjct:  361 PEGHQAVALRVSADLAVFYNCQIDGYQDTLYVHSHRQFFRDCTVSGTVDFIFGDGIVVLQNCNIVVRKPMKSQSCMITAQGRSDKRESTGLVLQNCHITGEPAYIPVKSINKAYLGRPWKEFSRTIIMGTTIDDVIDPAGWLPWNGDFALNTLYYAEYENNGPGSNQAQRVKWPGI 536          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.296e-56
Identity = 99/176 (56.25%), Postives = 125/176 (71.02%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGI 530
            P+KHQAVAL V ADLS FY C M A+QDT+Y H+ RQF+ +C+I GTVDFIFGNAA V Q C+I  R+P  GQ+N +TAQGR DPNQNTGI I    I    +L  +Q    T+LGRPWK++S TVIM+S +   I+P GW  W G+ A +T+FY E+ N+G GA T  RVKW+G+
Sbjct:  358 PAKHQAVALMVSADLSVFYKCTMDAFQDTMYAHAQRQFYRDCVILGTVDFIFGNAAVVFQKCEILPRRPMKGQQNTITAQGRKDPNQNTGISIHNCTIKPLDNLTDIQ----TFLGRPWKDFSTTVIMKSFMDKFINPKGWLPWTGDTAPDTIFYAEYLNSGPGASTKNRVKWQGL 529          

HSP 2 Score: 29.6462 bits (65), Expect = 3.296e-56
Identity = 13/35 (37.14%), Postives = 20/35 (57.14%), Query Frame = 1
Query:  523 RGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFS 627
            +G +   +  EA  FT   FI G++WL +T  PF+
Sbjct:  527 QGLKTSLTKKEANKFTVKPFIDGNNWLPATKVPFN 561          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 7.314e-56
Identity = 99/175 (56.57%), Postives = 121/175 (69.14%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527
            P  HQAVALR  +D+S FY C +  YQDTLYVHS RQFF  C I GTVDFIFGNAAAVLQNC I AR P +G  N +TAQ R +PNQ TGIVI  S +     ++   G   TYLGRPW+ Y+RTV++ + +  +I P GW +WD   AL+TL+YGE+QN+G G+GT  RV W G
Sbjct:  267 PENHQAVALRSNSDMSVFYRCSIEGYQDTLYVHSGRQFFRECDIYGTVDFIFGNAAAVLQNCRIFARNPPNG-VNTITAQSRFNPNQTTGIVIHNSVVKGAPGVQ--LGGVKTYLGRPWRSYARTVVIGTYLDTLIEPNGWIDWDNVTALSTLYYGEYQNSGPGSGTENRVDWAG 438          

HSP 2 Score: 35.8094 bits (81), Expect = 7.314e-56
Identity = 17/37 (45.95%), Postives = 22/37 (59.46%), Query Frame = 1
Query:  526 GFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636
            GF VI+   EA+ FT   FI  +SWL  T  PF++ L
Sbjct:  438 GFHVISDIQEAREFTLPKFIDSASWLPPTKVPFTINL 474          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME33_ARATH (Probable pectinesterase/pectinesterase inhibitor 33 OS=Arabidopsis thaliana GN=PME33 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.257e-55
Identity = 111/208 (53.37%), Postives = 134/208 (64.42%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEW--DGNFALNTLFYGEHQNAGAGAGTSGRVKWKGI*GYYKCYRGSSFYSWKLHCW**LAGLHWFP 620
            P + QAVA+R  +DLS FY   +  +QDTLY+HS RQFF  C I+GT+DFIFGNAA V QNC I  R+P  GQ N++TAQGR DP QNTGI I  SRI A SDLKPV  ++ TYLGRPW+ YSR  IM++ I + I P GW  W    NFALNT+FYGE++N G G+ T  RV+WKG          S F    L     +AG  W P
Sbjct:  382 PLRGQAVAVRSSSDLSVFYRVGIHGFQDTLYIHSQRQFFRECYISGTIDFIFGNAAVVFQNCMILVRRPLHGQANIITAQGRGDPFQNTGITIHSSRIIAASDLKPVIRAYKTYLGRPWQAYSRVTIMKTYIDNSISPLGWSPWLRGSNFALNTVFYGEYKNFGPGSSTRWRVRWKGFHAITSTAVASRFTVGSL-----IAGGSWLP 584          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 3.850e-55
Identity = 111/208 (53.37%), Postives = 137/208 (65.87%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEW-DGN-FALNTLFYGEHQNAGAGAGTSGRVKWKGI*GYYKCYRGSSFYSWKLHCW**LAGLHWFP 620
            P+K QAVALR  +DLS FY C +  YQDTL VHS RQF+  C I GTVDFIFGNAAAV QNC I  R+P  GQ N++TAQGRADP QNTGI I  SRI    DLKPV G+  TY+GRPW ++SRTV++Q+ + +V+ P GW  W +G+ F L+TLFY E++N G  + T  RV WKG     +    S+F   K      +AG  W P
Sbjct:  324 PAKGQAVALRSSSDLSIFYKCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAAVFQNCLILPRRPLKGQANVITAQGRADPFQNTGISIHNSRILPAPDLKPVVGTVKTYMGRPWMKFSRTVVLQTYLDNVVSPVGWSPWIEGSVFGLDTLFYAEYKNTGPASSTRWRVSWKGFHVLGRASDASAFTVGKF-----IAGTAWLP 526          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 7.926e-55
Identity = 98/174 (56.32%), Postives = 116/174 (66.67%), Query Frame = 3
Query:    9 KHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGI 530
            KHQAVA+RV AD S FYNC    YQDTLY HS+RQF+ +C I+GT+DF+FG+AAAV QNC +  RKP   Q   +TA GR DP ++TG V+Q   I    D   V+    TYLGRPWKEYSRT+IM + I D + P GW  W G F LNTLFY E QN G GA  + RV W GI
Sbjct:  355 KHQAVAIRVLADESIFYNCKFDGYQDTLYAHSHRQFYRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLLNQACPITAHGRKDPRESTGFVLQGCTIVGEPDYLAVKEQSKTYLGRPWKEYSRTIIMNTFIPDFVPPEGWQPWLGEFGLNTLFYSEVQNTGPGAAITKRVTWPGI 528          

HSP 2 Score: 31.5722 bits (70), Expect = 7.926e-55
Identity = 13/31 (41.94%), Postives = 17/31 (54.84%), Query Frame = 1
Query:  544 SATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636
            S  E   FTP  +I G +W+   G P+ LGL
Sbjct:  532 SDEEILKFTPAQYIQGDAWIPGKGVPYILGL 562          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME16_ARATH (Probable pectinesterase/pectinesterase inhibitor 16 OS=Arabidopsis thaliana GN=PME16 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.120e-54
Identity = 105/175 (60.00%), Postives = 121/175 (69.14%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527
            P   QAVALRVGAD S  + C +  YQD+LY HS RQF+    I GTVDFIFGN+A V Q+C+I ARKP  GQ+N VTAQGR++P QNTGI IQ  RI A S          TYLGRPWKEYSRTV+MQS I   IHP+GW  W G F L +LFYGE+ N+G G+  SGRVKW G
Sbjct:  315 PKSEQAVALRVGADKSVVHRCSVEGYQDSLYTHSKRQFYRETDITGTVDFIFGNSAVVFQSCNIAARKPLPGQRNFVTAQGRSNPGQNTGIAIQNCRITAES---------MTYLGRPWKEYSRTVVMQSFIGGSIHPSGWSPWSGGFGLKSLFYGEYGNSGPGSSVSGRVKWSG 480          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.049e-52
Identity = 98/176 (55.68%), Postives = 123/176 (69.89%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEW-DGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527
            P  HQAVA+RV +D S F NC    YQDTLY +++RQ++ +C+I GTVDFIFG+AAA+ QNCDI  RK   GQKN VTAQGR D  Q TG VI    +    DLKPV+  F +YLGRPWK +SRTV+M+S+I DVI P GW  W + +FA++TL Y E++N G    T+ RVKW G
Sbjct:  397 PEGHQAVAIRVQSDRSVFLNCRFEGYQDTLYAYTHRQYYRSCVIIGTVDFIFGDAAAIFQNCDIFIRKGLPGQKNTVTAQGRVDKFQTTGFVIHNCTVAPNEDLKPVKAQFKSYLGRPWKPHSRTVVMESTIEDVIDPVGWLRWQETDFAIDTLSYAEYKNDGPSGATAARVKWPG 572          
The following BLAST results are available for this feature:
BLAST of CF417950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PME43_ARATH1.779e-5755.43Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME22_ARATH1.783e-5759.43Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME58_ARATH2.666e-5657.95Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME46_ARATH3.296e-5656.25Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME38_ARATH7.314e-5656.57Putative pectinesterase/pectinesterase inhibitor 3... [more]
PME33_ARATH2.257e-5553.37Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME59_ARATH3.850e-5553.37Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME28_ARATH7.926e-5556.32Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME16_ARATH1.120e-5460.00Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME45_ARATH1.049e-5255.68Putative pectinesterase/pectinesterase inhibitor 4... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-880 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-012_A02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417950 ID=CF417950; Name=CF417950; organism=Citrus sinensis; type=EST; length=665bp
GCCCCTCAAAGCACCAGGCGGTGGCACTACGAGTGGGAGCTGACCTTTCA
GCATTTTACAATTGCGATATGTTAGCTTACCAAGACACACTCTACGTCCA
CTCGAACCGCCAGTTCTTTGTGAACTGCTTAATTGCTGGCACGGTTGATT
TTATTTTTGGTAACGCTGCAGCCGTGTTACAAAATTGTGACATCCATGCA
CGAAAGCCCAATTCCGGCCAAAAAAATATGGTCACAGCCCAAGGCAGGGC
TGACCCTAACCAAAACACCGGCATTGTCATTCAAAAATCTAGGATTGGTG
CCACCTCCGATTTAAAACCGGTTCAGGGTAGTTTCCCGACGTACCTCGGC
AGGCCCTGGAAGGAGTACTCGAGGACGGTGATCATGCAGTCATCGATTAC
TGACGTGATCCACCCTGCCGGGTGGCACGAGTGGGATGGTAACTTCGCGT
TGAACACATTGTTTTACGGAGAGCATCAGAACGCCGGAGCCGGTGCCGGA
ACTTCAGGGAGAGTGAAATGGAAGGGGATTTAGGGTTATTACAAGTGCTA
CCGAGGCTCAAGCTTTTACTCCTGGAAGCTTCATTGCTGGTAGTAGCTGG
CTGGGCTCCACTGGTTTCCCATTCTCCCTTGGTTTGTAATATTCACTAGG
AGTTTTAATTAATAT
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