CF417958

Overview
NameCF417958
Unique NameCF417958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417958 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.975e-22
Identity = 62/164 (37.80%), Postives = 94/164 (57.32%), Query Frame = 2
Query:  194 NVEQYDLVPLDTQVAFDLDELLKASAFV-----LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 670
            N  QYD     +++ FD   +L A+        +G+ G G VYK  L  G  +AV+RL  G  Q   EF+ EV  + +++H N+V L  +    DE++L+Y+++PN SL   +  +   +  T   W +R +II+G+A+GLVYLHE S  + +H DLK SNILL
Sbjct:  313 NEAQYDYGG-QSKLRFDFRMILTATDDFSFENKIGQGGFGSVYKGKLPGGEEIAVKRLTRGSGQGEIEFRNEVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEEKRLLLT---WDMRARIIEGVARGLVYLHEDSQLRIIHRDLKASNILL 472          
BLAST of CF417958 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 5.975e-22
Identity = 68/175 (38.86%), Postives = 95/175 (54.29%), Query Frame = 2
Query:  164 RKDESETLSENVEQYDLVPLDTQVAFDLDELLKAS-----AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFK-EFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 670
            +K +        E+   V L     F L EL  AS       +LG+ G G VYK  L DG  +AV+RL E  +Q  + +FQTEVE I    H N++ LR +  +  E+LL+Y Y+ NGS+A+ L  +P   S  P+ W  R +I  G A+GL YLH+    K +H D+K +NILL
Sbjct:  252 KKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP--ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL 424          
BLAST of CF417958 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.804e-22
Identity = 64/152 (42.11%), Postives = 82/152 (53.95%), Query Frame = 2
Query:  275 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKE---------------FQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGT*YG 685
            V+G    G VYKVVL +G T+AV+RL  G  +   +               F+ EVE +GKIRH NIV L     + D KLL+Y+Y+PNGSL   LH   G +    + W  R KII   A+GL YLH  S    VH D+K +NIL+   YG
Sbjct:  681 VIGAGASGKVYKVVLTNGETVAVKRLWTGSVKETGDCDPEKGYKPGVQDEAFEAEVETLGKIRHKNIVKLWCCCSTRDCKLLVYEYMPNGSLGDLLHSSKGGM----LGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSNNILIDGDYG 828          
BLAST of CF417958 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.804e-22
Identity = 60/147 (40.82%), Postives = 81/147 (55.10%), Query Frame = 2
Query:  230 QVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 670
            +V  +LDE      +++G      VYK   +    +A++R+       F+EF+TE+E IG IRH NIV+L  Y  S    LL YDY+ NGSL   LHG PG      + W  R+KI  G A+GL YLH     + +H D+K SNILL
Sbjct:  646 RVTENLDE-----KYIIGYGASSTVYKCTSKTSRPIAIKRIYNQYPSNFREFETELETIGSIRHRNIVSLHGYALSPFGNLLFYDYMENGSLWDLLHG-PG--KKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILL 784          
BLAST of CF417958 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21
Identity = 59/147 (40.14%), Postives = 84/147 (57.14%), Query Frame = 2
Query:  230 QVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 670
            Q+ F  D+    +   +G+ G G V+K VL DG  +AV++L     Q  +EF  E+ AI  ++H N+V L  +     + LL Y+Y+ N SL++AL          P+ W  R KI  GIAKGL +LHE SP K+VH D+K +NILL
Sbjct:  673 QIKFATDDFNPTNK--IGEGGFGAVFKGVLADGRVVAVKQLSSKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPKH--KQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILL 815          
BLAST of CF417958 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21
Identity = 68/185 (36.76%), Postives = 96/185 (51.89%), Query Frame = 2
Query:  152 CLCFRKDESETLSENVEQYDL-----VPLDTQVAFDLDELLKASAFV-----LGKSGIGIVYKVVLEDGHTLAVRRLGEGG--SQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 670
            C CF K+  E   + V    +     V L     F L EL  A+        LG+   G VYK VL DG  +AV+R           + F++E+E + KIRH+NIV L  Y   + E+LL+Y+Y+P+G+L   LHG       + + WS+R+KI+   A+GL YLH       +H D+K SNILL
Sbjct:  473 CFCFDKNSVEADPDPVPHQSVLLPTAVSLGETKIFRLSELKDATHGFKEFNELGRGSFGFVYKAVLSDGIHVAVKRANAATIIHSNNRGFESELEILCKIRHNNIVNLLGYCSEMGERLLVYEYMPHGTLHDHLHG-----DLSQLDWSMRLKIMLQAARGLDYLHNEVDPPIIHRDVKTSNILL 652          
BLAST of CF417958 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.331e-21
Identity = 60/162 (37.04%), Postives = 94/162 (58.02%), Query Frame = 2
Query:  191 ENVEQYDLVPLDTQVAF--DLDELLKASAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 670
            E+V+ Y+   LD+  +   DL ++        G+ G G VYK  L  G  +AV+R  +G  Q  KEF TE+E + ++ H N+V+L  Y     E++L+Y+Y+PNGSL  AL  +       P+  ++R++I  G A+G++YLH  +    +H D+KPSNILL
Sbjct:  614 ESVKGYNFTELDSATSSFSDLSQI--------GRGGYGKVYKGHLPGGLVVAVKRAEQGSLQGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDALSAR----FRQPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILL 763          
BLAST of CF417958 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.331e-21
Identity = 55/132 (41.67%), Postives = 77/132 (58.33%), Query Frame = 2
Query:  275 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 670
            ++G  G G VYK+ ++DG   A++R+ +      + F+ E+E +G I+H  +V LR Y  S   KLL+YDY+P GSL  ALH +   +      W  RV II G AKGL YLH     + +H D+K SNILL
Sbjct:  311 IIGCGGFGTVYKLAMDDGKVFALKRILKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALHERGEQLD-----WDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILL 437          
BLAST of CF417958 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.331e-21
Identity = 54/131 (41.22%), Postives = 81/131 (61.83%), Query Frame = 2
Query:  278 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 670
            LG+ G G VYK +L  G  +AV+RL  G  Q   EF+ EV  + +++H N+V L  +    +E++L+Y+++PN SL   +  +      T   W VR +II+G+A+GL+YLHE S  + +H DLK SNILL
Sbjct:  346 LGQGGFGSVYKGILPSGQEIAVKRLAGGSGQGELEFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFDEDKRWLLT---WDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILL 473          
BLAST of CF417958 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.331e-21
Identity = 54/132 (40.91%), Postives = 76/132 (57.58%), Query Frame = 2
Query:  275 VLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 670
            ++G  G G VYK  L DG  +A+++L     Q  +EF  E+E IGKI+H N+V L  Y    +E+LL+Y+Y+  GSL T LH K        + W+ R KI  G A+GL +LH       +H D+K SN+LL
Sbjct:  864 MVGSGGFGEVYKAQLRDGSVVAIKKLIRITGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLL 995          
The following BLAST results are available for this feature:
BLAST of CF417958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 247
Match NameE-valueIdentityDescription
CRK38_ARATH5.975e-2237.80Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
BAK1_ARATH5.975e-2238.86BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
HSL1_ARATH7.804e-2242.11Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
ERL2_ARATH7.804e-2240.82LRR receptor-like serine/threonine-protein kinase ... [more]
RKF1_ARATH1.019e-2140.14Probable LRR receptor-like serine/threonine-protei... [more]
ACCR2_ARATH1.019e-2136.76Serine/threonine-protein kinase-like protein CCR2 ... [more]
Y5374_ARATH1.331e-2137.04Probable LRR receptor-like serine/threonine-protei... [more]
FEI1_ARATH1.331e-2141.67LRR receptor-like serine/threonine-protein kinase ... [more]
CRK36_ARATH1.331e-2141.22Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
BRL1_ARATH1.331e-2140.91Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-888 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-012_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417958 ID=CF417958; Name=CF417958; organism=Citrus sinensis; type=EST; length=686bp
TAAGAGTGCTATAGTAGCTATAATTGTGAGTGATGTAATTGGAATTTGCC
TTGTCGGGCTATTGTTCTCATATTGCTATTCAAGGGTTTGTGGTTTTGGC
GAGGGCAAGGATGAAAATTGTTATGCAAAAGGAGGTAAGGGAAGAAAAGA
GTGTTTGTGCTTCAGGAAAGATGAATCAGAGACTCTCTCAGAGAATGTTG
AACAGTATGACCTTGTGCCGCTGGATACACAGGTGGCTTTTGATTTGGAT
GAGCTGCTTAAGGCTTCAGCTTTTGTTCTTGGCAAGAGTGGAATTGGGAT
TGTATACAAAGTTGTGCTTGAAGATGGACATACCTTAGCAGTGAGAAGGT
TGGGTGAAGGCGGCTCTCAGAGGTTTAAGGAGTTCCAAACCGAAGTAGAA
GCAATTGGGAAGATAAGGCATTCAAACATTGTAACTCTCAGAGCATATTA
CTGGTCTGTTGATGAGAAACTGCTCATATATGATTATATACCTAATGGAA
GCCTAGCCACTGCACTCCATGGGAAGCCAGGAATGGTATCATTTACGCCA
GTGCCATGGTCAGTACGGGTGAAAATCATAAAAGGGATTGCAAAAGGCTT
GGTTTATCTGCATGAATTCAGCCCCAAAAAGTATGTCCATGGAGATCTGA
AACCTAGCAATATTTTGCTTGGGACATAATATGGAA
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