CF417958

Overview
NameCF417958
Unique NameCF417958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417958 vs. ExPASy Swiss-Prot
Match: ACCR4_ARATH (Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.282e-20
Identity = 58/161 (36.02%), Postives = 85/161 (52.80%), Query Frame = 2
Query:  239 FDLDELLKAS-----AFVLGKSGIGIVYKVVLEDGHTLAVRRLG------EGGSQRFKE------FQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 670
            F +DEL  A+      F LG    G VY+ VL DG  +A++R         G + R +       F  E+E++ ++ H N+V L  +Y   +E++L+Y+Y+ NGSLA  LH       F P+ W  R+ I    A+G+ YLHEF     +H D+K SNILL
Sbjct:  431 FSIDELALATDGFSVRFHLGIGSFGSVYQGVLSDGRHVAIKRAELTNPTLSGTTMRHRRADKDSAFVNELESMSRLNHKNLVRLLGFYEDTEERILVYEYMKNGSLADHLHNP----QFDPLSWQTRLMIALDAARGIQYLHEFIVPPVIHRDIKSSNILL 587          
BLAST of CF417958 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.593e-20
Identity = 61/169 (36.09%), Postives = 95/169 (56.21%), Query Frame = 2
Query:  182 TLSENVEQYDLVPLDTQVAFDLDELLKAS-----AFVLGKSGIGIVYKVVLEDGHTL-AVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 670
            T S N +    +P D    F + E+  A+       ++G  G G VYK  ++ G TL AV+RL    +Q  KEF+TE+E + K+RH ++V+L  Y    +E +L+Y+Y+P+G+L   L  +    S  P+ W  R++I  G A+GL YLH  +    +H D+K +NILL
Sbjct:  487 TDSTNTKPAKSLPADLCRRFSIFEIKSATNDFEDKLIIGVGGFGSVYKGQIDGGATLVAVKRLEITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLF-RRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILL 654          
BLAST of CF417958 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.593e-20
Identity = 64/149 (42.95%), Postives = 82/149 (55.03%), Query Frame = 2
Query:  275 VLGKSGIGIVYKVVLEDGHTLAVRRLGE---GGSQRFKE-------FQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHG--KPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGT*YG 685
            V+G    G VYKV L  G  +AV++L +   GG   +         F  EVE +G IRH +IV L     S D KLL+Y+Y+PNGSLA  LHG  K G+V    + W  R++I    A+GL YLH       VH D+K SNILL + YG
Sbjct:  688 VIGFGSSGKVYKVELRGGEVVAVKKLNKSVKGGDDEYSSDSLNRDVFAAEVETLGTIRHKSIVRLWCCCSSGDCKLLVYEYMPNGSLADVLHGDRKGGVV----LGWPERLRIALDAAEGLSYLHHDCVPPIVHRDVKSSNILLDSDYG 832          
BLAST of CF417958 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.593e-20
Identity = 53/131 (40.46%), Postives = 78/131 (59.54%), Query Frame = 2
Query:  278 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 670
            LG+ G G VYK  L +G  +AV+RL +   Q  KEF+ EV  + K++H N+V L  +    +EK+L+Y+++ N SL   L         + + W+ R KII GIA+G++YLH+ S    +H DLK  NILL
Sbjct:  346 LGQGGFGQVYKGTLPNGVQVAVKRLSKTSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFDSRMQ---SQLDWTTRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILL 473          
BLAST of CF417958 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 7.304e-20
Identity = 53/131 (40.46%), Postives = 76/131 (58.02%), Query Frame = 2
Query:  278 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 670
            LG+ G G VYK VL+ G  +AV+RL     Q   EF  EV  + K++H N+V L  +    +E++LIY++  N SL   +      +    + W  R +II G+A+GL+YLHE S  K VH D+K SN+LL
Sbjct:  350 LGEGGFGAVYKGVLDYGEEIAVKRLSMKSGQGDNEFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIFDSNRRMI---LDWETRYRIISGVARGLLYLHEDSRFKIVHRDMKASNVLL 477          
BLAST of CF417958 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.304e-20
Identity = 54/131 (41.22%), Postives = 76/131 (58.02%), Query Frame = 2
Query:  278 LGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 670
            LG+ G G VYK V   G  +AV+RL     Q   EF+ E+  + K++H N+V L  +    +E+LL+Y++I N SL   +           + W VR K+I GIA+GL+YLHE S  + +H DLK SNILL
Sbjct:  363 LGRGGFGSVYKGVFPQGQEIAVKRLSGNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIFDTE---KRQLLDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILL 490          
BLAST of CF417958 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 7.304e-20
Identity = 61/175 (34.86%), Postives = 98/175 (56.00%), Query Frame = 2
Query:  161 FRKDESETLSENVEQYDLVPLDTQVAFDLDELLKAS-----AFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 670
            FR+ +S   ++   + D+   D+ V +D   +  A+     +  LG+ G G VYK  L +G  +AV+RL +   Q  +EF+ E   + K++H N+V L  +    +E++LIY+++ N SL   L         + + W+ R KII GIA+G++YLH+ S  K +H DLK SNILL
Sbjct:  313 FRRRKSYQRTKTESESDISTTDSLV-YDFKTIEAATNKFSTSNKLGEGGFGAVYKGKLSNGTDVAVKRLSKKSGQGTREFRNEAVLVTKLQHRNLVRLLGFCLEREEQILIYEFVHNKSLDYFLFDPEKQ---SQLDWTRRYKIIGGIARGILYLHQDSRLKIIHRDLKASNILL 483          
BLAST of CF417958 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.304e-20
Identity = 61/166 (36.75%), Postives = 89/166 (53.61%), Query Frame = 2
Query:  179 ETLSENVEQYDLVPLDTQVAFDLDELLKA--SAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 670
            E LS N+  ++  PL      DL E      +  ++G  G G VYK  L+DG  +A+++L     Q  +EF  E+E IGKI+H N+V L  Y    +E+LL+Y+Y+  GSL   LH +    +   + W  R KI  G A+GL +LH       +H D+K SN+LL
Sbjct:  860 EALSINLAAFEK-PLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDR--KKTGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLL 1022          
BLAST of CF417958 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.304e-20
Identity = 61/166 (36.75%), Postives = 89/166 (53.61%), Query Frame = 2
Query:  179 ETLSENVEQYDLVPLDTQVAFDLDELLKA--SAFVLGKSGIGIVYKVVLEDGHTLAVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 670
            E LS N+  ++  PL      DL E      +  ++G  G G VYK  L+DG  +A+++L     Q  +EF  E+E IGKI+H N+V L  Y    +E+LL+Y+Y+  GSL   LH +  +     + W  R KI  G A+GL +LH       +H D+K SN+LL
Sbjct:  860 EALSINLAAFEK-PLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKI--GIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLL 1022          
BLAST of CF417958 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.540e-20
Identity = 61/169 (36.09%), Postives = 94/169 (55.62%), Query Frame = 2
Query:  182 TLSENVEQYDLVPLDTQVAFDLDELLKAS-----AFVLGKSGIGIVYKVVLEDGHTL-AVRRLGEGGSQRFKEFQTEVEAIGKIRHSNIVTLRAYYWSVDEKLLIYDYIPNGSLATALHGKPGMVSFTPVPWSVRVKIIKGIAKGLVYLHEFSPKKYVHGDLKPSNILL 670
            T S N +    +P D    F + E+  A+       ++G  G G VYK  ++ G TL AV+RL    +Q  KEF TE+E + K+RH ++V+L  Y    +E +L+Y+Y+P+G+L   L  +    S  P+ W  R++I  G A+GL YLH  +    +H D+K +NILL
Sbjct:  494 TGSTNTKSASSLPSDLCRRFSIYEIKSATNDFEEKLIIGVGGFGSVYKGRIDGGATLVAVKRLEITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLF-RRDKASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILL 661          
The following BLAST results are available for this feature:
BLAST of CF417958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 247
Match NameE-valueIdentityDescription
ACCR4_ARATH4.282e-2036.02Serine/threonine-protein kinase-like protein CCR4 ... [more]
Y5900_ARATH5.593e-2036.09Putative receptor-like protein kinase At5g39000 OS... [more]
RLK5_ARATH5.593e-2042.95Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
CRK5_ARATH5.593e-2040.46Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK41_ARATH7.304e-2040.46Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK29_ARATH7.304e-2041.22Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
CRK11_ARATH7.304e-2034.86Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
BRI1_SOLPE7.304e-2036.75Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
BRI1_SOLLC7.304e-2036.75Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
Y5389_ARATH9.540e-2036.09Probable receptor-like protein kinase At5g38990 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-888 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-012_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417958 ID=CF417958; Name=CF417958; organism=Citrus sinensis; type=EST; length=686bp
TAAGAGTGCTATAGTAGCTATAATTGTGAGTGATGTAATTGGAATTTGCC
TTGTCGGGCTATTGTTCTCATATTGCTATTCAAGGGTTTGTGGTTTTGGC
GAGGGCAAGGATGAAAATTGTTATGCAAAAGGAGGTAAGGGAAGAAAAGA
GTGTTTGTGCTTCAGGAAAGATGAATCAGAGACTCTCTCAGAGAATGTTG
AACAGTATGACCTTGTGCCGCTGGATACACAGGTGGCTTTTGATTTGGAT
GAGCTGCTTAAGGCTTCAGCTTTTGTTCTTGGCAAGAGTGGAATTGGGAT
TGTATACAAAGTTGTGCTTGAAGATGGACATACCTTAGCAGTGAGAAGGT
TGGGTGAAGGCGGCTCTCAGAGGTTTAAGGAGTTCCAAACCGAAGTAGAA
GCAATTGGGAAGATAAGGCATTCAAACATTGTAACTCTCAGAGCATATTA
CTGGTCTGTTGATGAGAAACTGCTCATATATGATTATATACCTAATGGAA
GCCTAGCCACTGCACTCCATGGGAAGCCAGGAATGGTATCATTTACGCCA
GTGCCATGGTCAGTACGGGTGAAAATCATAAAAGGGATTGCAAAAGGCTT
GGTTTATCTGCATGAATTCAGCCCCAAAAAGTATGTCCATGGAGATCTGA
AACCTAGCAATATTTTGCTTGGGACATAATATGGAA
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