CF418031

Overview
NameCF418031
Unique NameCF418031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: KAPA_YEAST (cAMP-dependent protein kinase type 1 OS=Saccharomyces cerevisiae GN=TPK1 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 33/89 (37.08%), Postives = 55/89 (61.80%), Query Frame = 3 
Query:  303 RLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            R+   K  + DF+ L  +G G+FG V L R++  G  +AMK LKK  +++  QVEH   ER +L+ V    I++++ +FQD+  +++IM
Sbjct:   76 RVTSGKYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 164
[Close]
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: GRK5_RAT (G protein-coupled receptor kinase 5 OS=Rattus norvegicus GN=Grk5 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 31/97 (31.96%), Postives = 60/97 (61.86%), Query Frame = 3 
Query:  285 RETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMGV 575
            R  ++  L+R+ +  + F Q  ++GKG FGEV  C+ + TG+++A K+L+K  + KR       +E+ +L +V+S+ +V L Y+++  D L L++ +
Sbjct:  169 RFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 265
[Close]
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: GRK5_MOUSE (G protein-coupled receptor kinase 5 OS=Mus musculus GN=Grk5 PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 31/97 (31.96%), Postives = 60/97 (61.86%), Query Frame = 3 
Query:  285 RETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMGV 575
            R  ++  L+R+ +  + F Q  ++GKG FGEV  C+ + TG+++A K+L+K  + KR       +E+ +L +V+S+ +V L Y+++  D L L++ +
Sbjct:  169 RFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 265
[Close]
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: GRK5_HUMAN (G protein-coupled receptor kinase 5 OS=Homo sapiens GN=GRK5 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 31/97 (31.96%), Postives = 60/97 (61.86%), Query Frame = 3 
Query:  285 RETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMGV 575
            R  ++  L+R+ +  + F Q  ++GKG FGEV  C+ + TG+++A K+L+K  + KR       +E+ +L +V+S+ +V L Y+++  D L L++ +
Sbjct:  169 RFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 265
The following BLAST results are available for this feature:
BLAST of CF418031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
KAPA_YEAST8.770e-1137.08cAMP-dependent protein kinase type 1 OS=Saccharomy... [more]
GRK5_RAT8.770e-1131.96G protein-coupled receptor kinase 5 OS=Rattus norv... [more]
GRK5_MOUSE8.770e-1131.96G protein-coupled receptor kinase 5 OS=Mus musculu... [more]
GRK5_HUMAN8.770e-1131.96G protein-coupled receptor kinase 5 OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-961 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-012_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF418031 ID=CF418031; Name=CF418031; organism=Citrus sinensis; type=EST; length=624bp
TGATTTCGGCGAAAATGGACGGTCGTGATGATACGGTTAGATTAGGTGCT
CTAAACTTGAAGCCGGCTGCTCGTGAATTCGATTTGGATCCAGACGTGTC
CGTTTCATCGCCGGTGACGAGACAGAAAGCCGCTGCCGCAAAGCAGTTCA
TTGAGAATCATTACAAGAACTACTTGCAAGGATTGCAAGATCGTAAAGAG
AGGCGTAGAGCCCTTCAAATGAGAGCACAACAAGCTGCGGTCTCAAATGA
GGAACAAGAGGAGATGCTGAGGAATTTAGAGCGCAGAGAAACTGAATATA
TGAGGCTGCAGAGGCGTAAAATTGGGATTGATGACTTTGAGCAATTAACT
TTAATTGGAAAAGGTGCATTTGGTGAGGTCAGGTTATGTCGTGCTAAAAC
TACTGGAGAGATCTTTGCCATGAAGAAATTGAAGAAATCGGAGATGCTTA
AACGAGGACAGGTTGAGCATGTTCGATCAGAGAGGAACTTACTTGCAGAG
GTTGATAGTCGGTGCATAGTACAGCTTTTCTACTCTTTTCAAGATTCTGA
TTTCTTATATCTCATCATGGGAGTATTTACCTGGTGGTGACATTATGACA
TTACTAATGAGAGAAGATATTCTT
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