CF418031

Overview
NameCF418031
Unique NameCF418031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: LATS1_HUMAN (Serine/threonine-protein kinase LATS1 OS=Homo sapiens GN=LATS1 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.485e-25
Identity = 57/145 (39.31%), Postives = 88/145 (60.69%), Query Frame = 3
Query:  135 AAKQFIENHYKNYLQGLQDRKEXXXXXXXXXXXXXVSNEEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            A K F+E H +N L+  Q R               +S + Q++M + L ++E+ Y+RL+R K+    F ++  +G GAFGEV L R   T  ++A K L+K ++L R QV HV++ER++LAE D+  +V+L+YSFQD D LY +M
Sbjct:  638 AFKFFMEQHVENVLKSHQQRLHRKKQLENEMMRVGLSQDAQDQMRKMLCQKESNYIRLKRAKMDKSMFVKIKTLGIGAFGEVCLARKVDTKALYATKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 782          

HSP 2 Score: 26.9498 bits (58), Expect = 3.485e-25
Identity = 10/17 (58.82%), Postives = 15/17 (88.24%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMREDI 621
            +Y+PGGD+M+LL+R  I
Sbjct:  783 DYIPGGDMMSLLIRMGI 799          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: LATS1_MOUSE (Serine/threonine-protein kinase LATS1 OS=Mus musculus GN=Lats1 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.486e-25
Identity = 57/145 (39.31%), Postives = 88/145 (60.69%), Query Frame = 3
Query:  135 AAKQFIENHYKNYLQGLQDRKEXXXXXXXXXXXXXVSNEEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            A K F+E H +N L+  Q R               +S + Q++M + L ++E+ Y+RL+R K+    F ++  +G GAFGEV L R   T  ++A K L+K ++L R QV HV++ER++LAE D+  +V+L+YSFQD D LY +M
Sbjct:  637 AFKFFMEQHVENVLKSHQQRLHRKKQLENEMMRVGLSQDAQDQMRKMLCQKESNYIRLKRAKMDKSMFVKIKTLGIGAFGEVCLARKVDTKALYATKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 781          

HSP 2 Score: 26.9498 bits (58), Expect = 3.486e-25
Identity = 10/17 (58.82%), Postives = 15/17 (88.24%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMREDI 621
            +Y+PGGD+M+LL+R  I
Sbjct:  782 DYIPGGDMMSLLIRMGI 798          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: LATS2_HUMAN (Serine/threonine-protein kinase LATS2 OS=Homo sapiens GN=LATS2 PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 7.686e-25
Identity = 56/145 (38.62%), Postives = 86/145 (59.31%), Query Frame = 3
Query:  135 AAKQFIENHYKNYLQGLQDRKEXXXXXXXXXXXXXVSNEEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            A K F+E H +N ++  Q +               +   EQE+M + L ++E+ Y RL+R K+    F ++  +G GAFGEV L     T  ++AMK L+K ++L R QV HV++ER++LAE D+  +V+L+YSFQD D LY +M
Sbjct:  601 AFKFFMEQHVENVIKTYQQKVNRRLQLEQEMAKAGLCEAEQEQMRKILYQKESNYNRLKRAKMDKSMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDSLYFVM 745          

HSP 2 Score: 27.7202 bits (60), Expect = 7.686e-25
Identity = 9/17 (52.94%), Postives = 16/17 (94.12%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMREDI 621
            +Y+PGGD+M+LL+R ++
Sbjct:  746 DYIPGGDMMSLLIRMEV 762          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: LATS2_MOUSE (Serine/threonine-protein kinase LATS2 OS=Mus musculus GN=Lats2 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.692e-25
Identity = 56/145 (38.62%), Postives = 86/145 (59.31%), Query Frame = 3
Query:  135 AAKQFIENHYKNYLQGLQDRKEXXXXXXXXXXXXXVSNEEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            A K F+E H +N ++  Q +               +   EQE+M + L ++E+ Y RL+R K+    F ++  +G GAFGEV L     T  ++AMK L+K ++L R QV HV++ER++LAE D+  +V+L+YSFQD D LY +M
Sbjct:  559 AFKFFMEQHVENVIKTYQQKVSRRLQLEQEMAKAGLCEAEQEQMRKILYQKESNYNRLKRAKMDKSMFVKIKTLGIGAFGEVCLACKLDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDSLYFVM 703          

HSP 2 Score: 27.7202 bits (60), Expect = 7.692e-25
Identity = 9/17 (52.94%), Postives = 16/17 (94.12%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMREDI 621
            +Y+PGGD+M+LL+R ++
Sbjct:  704 DYIPGGDMMSLLIRMEV 720          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: COT1_NEUCR (Serine/threonine-protein kinase cot-1 OS=Neurospora crassa GN=cot-1 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.406e-23
Identity = 47/105 (44.76%), Postives = 77/105 (73.33%), Query Frame = 3
Query:  255 QEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            +E +     R+E +Y+R  R K   ++++ + +IGKGAFGEV+L + K  G+++AMK L K+EM K+ Q+ HVR+ER++LAE DS  +V+L+ +FQD++FLY++M
Sbjct:  187 RESIWSTAGRKEGQYLRFLRTKDKPENYQTIKIIGKGAFGEVKLVQKKADGKVYAMKSLIKTEMFKKDQLAHVRAERDILAESDSPWVVKLYTTFQDANFLYMLM 291          

HSP 2 Score: 28.4906 bits (62), Expect = 1.406e-23
Identity = 10/17 (58.82%), Postives = 16/17 (94.12%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMREDI 621
            E+LPGGD+MT+L++ +I
Sbjct:  292 EFLPGGDLMTMLIKYEI 308          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: MRCKG_HUMAN (Serine/threonine-protein kinase MRCK gamma OS=Homo sapiens GN=CDC42BPG PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.116e-19
Identity = 48/93 (51.61%), Postives = 64/93 (68.82%), Query Frame = 3
Query:  300 MRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMGVF 578
            +RLQR     DDFE L +IG+GAFGEV + R + TG+IFAMK L K EMLKR +    R ER++L + DSR +  L Y+FQD ++LYL+M  +
Sbjct:   64 LRLQR-----DDFEILKVIGRGAFGEVTVVRQRDTGQIFAMKMLHKWEMLKRAETACFREERDVLVKGDSRWVTTLHYAFQDEEYLYLVMDYY 151          

HSP 2 Score: 22.3274 bits (46), Expect = 5.116e-19
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMR 612
            +Y  GGD++TLL R
Sbjct:  149 DYYAGGDLLTLLSR 162          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: SID2_SCHPO (Serine/threonine-protein kinase sid2 OS=Schizosaccharomyces pombe GN=sid2 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.207e-19
Identity = 54/175 (30.86%), Postives = 89/175 (50.86%), Query Frame = 3
Query:   45 GALNLKPAAREFDLDPDVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKEXXXXXXXXXXXXXVSNEEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            G++NL     E        V  P  ++ A   + F  +HY   L  L  RK+              S   ++E+++    RE  Y+R +R +I   DF+ +T +G+G +G V L R + T EI A+K + KS + K  ++ HV +ER++L   +S  +V+L Y+FQD+  +YL M
Sbjct:  120 GSMNLSVEEME-------KVVQPKVKRMATICQMFFLDHYFEQLHYLYTRKQRARLFEEQLLKEPDSR--RDELVKRYNGRERVYLRKRRTRISHGDFQTITQVGQGGYGSVWLARKRDTKEIVALKIMNKSVLHKMDEIRHVLTERDILTTANSEWLVRLLYAFQDTSNIYLAM 285          

HSP 2 Score: 24.2534 bits (51), Expect = 5.207e-19
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMREDIL 624
            E++PGGD  TLL    +L
Sbjct:  286 EFVPGGDFRTLLSNSGVL 303          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: MRCKG_MOUSE (Serine/threonine-protein kinase MRCK gamma OS=Mus musculus GN=Cdc42bpg PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.901e-18
Identity = 47/93 (50.54%), Postives = 64/93 (68.82%), Query Frame = 3
Query:  300 MRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMGVF 578
            +RLQR     DDFE L +IG+GAFGEV + R + +G+IFAMK L K EMLKR +    R ER++L + DSR +  L Y+FQD ++LYL+M  +
Sbjct:   64 LRLQR-----DDFEILKVIGRGAFGEVAVVRQRGSGQIFAMKMLHKWEMLKRAETACFREERDVLVKGDSRWVTALHYAFQDEEYLYLVMDYY 151          

HSP 2 Score: 22.3274 bits (46), Expect = 1.901e-18
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMR 612
            +Y  GGD++TLL R
Sbjct:  149 DYYAGGDLLTLLSR 162          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: DMPK_HUMAN (Myotonin-protein kinase OS=Homo sapiens GN=DMPK PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 5.526e-18
Identity = 43/90 (47.78%), Postives = 64/90 (71.11%), Query Frame = 3
Query:  300 MRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            +RL+  ++  DDFE L +IG+GAF EV + + K TG+++AMK + K +MLKRG+V   R ER++L   D R I QL ++FQD ++LYL+M
Sbjct:   69 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVM 158          

HSP 2 Score: 21.9422 bits (45), Expect = 5.526e-18
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMR 612
            EY  GGD++TLL +
Sbjct:  159 EYYVGGDLLTLLSK 172          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: DMPK_MOUSE (Myotonin-protein kinase OS=Mus musculus GN=Dmpk PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 5.527e-18
Identity = 43/89 (48.31%), Postives = 64/89 (71.91%), Query Frame = 3
Query:  303 RLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            RL+  ++  DDFE L +IG+GAF EV + + K TG+++AMK + K +MLKRG+V   R ER++L + D R I QL ++FQD ++LYL+M
Sbjct:   60 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVKGDRRWITQLHFAFQDENYLYLVM 148          

HSP 2 Score: 21.9422 bits (45), Expect = 5.527e-18
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMR 612
            EY  GGD++TLL +
Sbjct:  149 EYYVGGDLLTLLSK 162          
The following BLAST results are available for this feature:
BLAST of CF418031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
LATS1_HUMAN3.485e-2539.31Serine/threonine-protein kinase LATS1 OS=Homo sapi... [more]
LATS1_MOUSE3.486e-2539.31Serine/threonine-protein kinase LATS1 OS=Mus muscu... [more]
LATS2_HUMAN7.686e-2538.62Serine/threonine-protein kinase LATS2 OS=Homo sapi... [more]
LATS2_MOUSE7.692e-2538.62Serine/threonine-protein kinase LATS2 OS=Mus muscu... [more]
COT1_NEUCR1.406e-2344.76Serine/threonine-protein kinase cot-1 OS=Neurospor... [more]
MRCKG_HUMAN5.116e-1951.61Serine/threonine-protein kinase MRCK gamma OS=Homo... [more]
SID2_SCHPO5.207e-1930.86Serine/threonine-protein kinase sid2 OS=Schizosacc... [more]
MRCKG_MOUSE1.901e-1850.54Serine/threonine-protein kinase MRCK gamma OS=Mus ... [more]
DMPK_HUMAN5.526e-1847.78Myotonin-protein kinase OS=Homo sapiens GN=DMPK PE... [more]
DMPK_MOUSE5.527e-1848.31Myotonin-protein kinase OS=Mus musculus GN=Dmpk PE... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-961 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-012_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF418031 ID=CF418031; Name=CF418031; organism=Citrus sinensis; type=EST; length=624bp
TGATTTCGGCGAAAATGGACGGTCGTGATGATACGGTTAGATTAGGTGCT
CTAAACTTGAAGCCGGCTGCTCGTGAATTCGATTTGGATCCAGACGTGTC
CGTTTCATCGCCGGTGACGAGACAGAAAGCCGCTGCCGCAAAGCAGTTCA
TTGAGAATCATTACAAGAACTACTTGCAAGGATTGCAAGATCGTAAAGAG
AGGCGTAGAGCCCTTCAAATGAGAGCACAACAAGCTGCGGTCTCAAATGA
GGAACAAGAGGAGATGCTGAGGAATTTAGAGCGCAGAGAAACTGAATATA
TGAGGCTGCAGAGGCGTAAAATTGGGATTGATGACTTTGAGCAATTAACT
TTAATTGGAAAAGGTGCATTTGGTGAGGTCAGGTTATGTCGTGCTAAAAC
TACTGGAGAGATCTTTGCCATGAAGAAATTGAAGAAATCGGAGATGCTTA
AACGAGGACAGGTTGAGCATGTTCGATCAGAGAGGAACTTACTTGCAGAG
GTTGATAGTCGGTGCATAGTACAGCTTTTCTACTCTTTTCAAGATTCTGA
TTTCTTATATCTCATCATGGGAGTATTTACCTGGTGGTGACATTATGACA
TTACTAATGAGAGAAGATATTCTT
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