CF418031

Overview
NameCF418031
Unique NameCF418031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: PPK35_SCHPO (Serine/threonine-protein kinase ppk35 OS=Schizosaccharomyces pombe GN=ppk35 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.263e-17
Identity = 49/156 (31.41%), Postives = 88/156 (56.41%), Query Frame = 3
Query:  102 VSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKEXXXXXXXXXXXXXVSNEEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            +S P TR+K  A + F  N+Y + ++  + RKE             +   +Q+ + +    RE  ++R +R KI    F+ L  +G+G +G V L + + T E+ AMK +KKS + +  +V+H+ +ER++L   +S  +V+L+Y+FQD + +YL M
Sbjct:   86 LSRPETRRKRMACQVFFLNYYISTIEYHKLRKERLEEFTACTSS--LKQSKQKRLWKEHCGRERAFLRKKRTKIQCSHFDLLVKLGQGGYGSVWLAKKRNTHELLAMKMMKKSTLQQLNEVKHILNERDILTNTNSEWLVKLYYAFQDKEKVYLAM 239          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: ROCK1_RAT (Rho-associated protein kinase 1 OS=Rattus norvegicus GN=Rock1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.439e-17
Identity = 40/98 (40.82%), Postives = 66/98 (67.35%), Query Frame = 3
Query:  276 LERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            L R +    +++  ++  +D+E + +IG+GAFGEV+L R K+T +++AMK L K EM+KR        ER+++A  +S  +VQLFY+FQD  +LY++M
Sbjct:   56 LSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 153          

HSP 2 Score: 25.409 bits (54), Expect = 4.439e-17
Identity = 8/17 (47.06%), Postives = 13/17 (76.47%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMREDI 621
            EY+PGGD++ L+   D+
Sbjct:  154 EYMPGGDLVNLMSNYDV 170          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: ROCK1_RABIT (Rho-associated protein kinase 1 OS=Oryctolagus cuniculus GN=ROCK1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.440e-17
Identity = 40/98 (40.82%), Postives = 66/98 (67.35%), Query Frame = 3
Query:  276 LERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            L R +    +++  ++  +D+E + +IG+GAFGEV+L R K+T +++AMK L K EM+KR        ER+++A  +S  +VQLFY+FQD  +LY++M
Sbjct:   56 LSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 153          

HSP 2 Score: 25.409 bits (54), Expect = 4.440e-17
Identity = 8/17 (47.06%), Postives = 13/17 (76.47%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMREDI 621
            EY+PGGD++ L+   D+
Sbjct:  154 EYMPGGDLVNLMSNYDV 170          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: ROCK1_MOUSE (Rho-associated protein kinase 1 OS=Mus musculus GN=Rock1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.440e-17
Identity = 40/98 (40.82%), Postives = 66/98 (67.35%), Query Frame = 3
Query:  276 LERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            L R +    +++  ++  +D+E + +IG+GAFGEV+L R K+T +++AMK L K EM+KR        ER+++A  +S  +VQLFY+FQD  +LY++M
Sbjct:   56 LSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 153          

HSP 2 Score: 25.409 bits (54), Expect = 4.440e-17
Identity = 8/17 (47.06%), Postives = 13/17 (76.47%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMREDI 621
            EY+PGGD++ L+   D+
Sbjct:  154 EYMPGGDLVNLMSNYDV 170          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: ROCK1_HUMAN (Rho-associated protein kinase 1 OS=Homo sapiens GN=ROCK1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.440e-17
Identity = 40/98 (40.82%), Postives = 66/98 (67.35%), Query Frame = 3
Query:  276 LERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            L R +    +++  ++  +D+E + +IG+GAFGEV+L R K+T +++AMK L K EM+KR        ER+++A  +S  +VQLFY+FQD  +LY++M
Sbjct:   56 LSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 153          

HSP 2 Score: 25.409 bits (54), Expect = 4.440e-17
Identity = 8/17 (47.06%), Postives = 13/17 (76.47%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMREDI 621
            EY+PGGD++ L+   D+
Sbjct:  154 EYMPGGDLVNLMSNYDV 170          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: KRAC_DICDI (RAC family serine/threonine-protein kinase homolog OS=Dictyostelium discoideum GN=pkbA PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.189e-17
Identity = 41/84 (48.81%), Postives = 58/84 (69.05%), Query Frame = 3
Query:  318 KIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            K+G+ DFE L L+GKG+FG+V   R K TGE++AMK L K  +++  +VEH  SERN+L +++   +V L YSFQ  D LY I+
Sbjct:  114 KVGVADFELLNLVGKGSFGKVIQVRKKDTGEVYAMKVLSKKHIVEHNEVEHTLSERNILQKINHPFLVNLNYSFQTEDKLYFIL 197          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: ROCK2_HUMAN (Rho-associated protein kinase 2 OS=Homo sapiens GN=ROCK2 PE=1 SV=4)

HSP 1 Score: 80.8777 bits (198), Expect = 2.140e-16
Identity = 39/98 (39.80%), Postives = 65/98 (66.33%), Query Frame = 3
Query:  276 LERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            L R E    +++  ++  +D++ + +IG+GAFGEV+L R K + +++AMK L K EM+KR        ER+++A  +S  +VQLFY+FQD  +LY++M
Sbjct:   72 LNRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 169          

HSP 2 Score: 25.409 bits (54), Expect = 2.140e-16
Identity = 8/17 (47.06%), Postives = 13/17 (76.47%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMREDI 621
            EY+PGGD++ L+   D+
Sbjct:  170 EYMPGGDLVNLMSNYDV 186          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: PK3_DICDI (Protein kinase 3 OS=Dictyostelium discoideum GN=pkgC PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 5.308e-16
Identity = 39/85 (45.88%), Postives = 60/85 (70.59%), Query Frame = 3
Query:  315 RKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            +K+ IDDFE L ++G G+FG V L R K TG+ +AMK L K +MLK+ Q+ H  +E+ +L+ +D   IV+L ++FQ+ DFL++ M
Sbjct:  491 KKLTIDDFELLKVLGVGSFGRVYLVRRKDTGKFYAMKVLNKKDMLKKKQIAHTNTEKMVLSTMDHPFIVRLHFAFQNEDFLFMCM 575          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: KPK1_ARATH (Serine/threonine-protein kinase AtPK1/AtPK6 OS=Arabidopsis thaliana GN=ATPK1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.933e-16
Identity = 38/83 (45.78%), Postives = 60/83 (72.29%), Query Frame = 3
Query:  321 IGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            +GIDDFE + ++GKGAFG+V   R K T EI+AMK ++K  ++++   E++++ER++L ++D   IVQL YSFQ    LYL++
Sbjct:  129 VGIDDFEVMKVVGKGAFGKVYQVRKKETSEIYAMKVMRKDHIMEKNHAEYMKAERDILTKIDHPFIVQLKYSFQTKYRLYLVL 211          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: PKGA_DICDI (Probable serine/threonine-protein kinase pkgA OS=Dictyostelium discoideum GN=pkgA PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.933e-16
Identity = 37/81 (45.68%), Postives = 60/81 (74.07%), Query Frame = 3
Query:  327 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            I DFE +  I KG +G+V L +   TG+I+A+K+LKKS+M+K+ Q++HV+ ERN+LA   +  +V+++YSFQ  ++ YL+M
Sbjct:  807 ISDFEFIKPITKGGYGKVFLAKKIRTGDIYAIKRLKKSDMIKKNQLDHVKVERNILAYTSNPFVVKMYYSFQTKEYYYLVM 887          

HSP 2 Score: 20.7866 bits (42), Expect = 7.933e-16
Identity = 9/17 (52.94%), Postives = 10/17 (58.82%), Query Frame = 1
Query:  556 YISSWEYLPGGDIMTLL 606
            Y    EYL GGD  +LL
Sbjct:  883 YYLVMEYLQGGDCFSLL 899          
The following BLAST results are available for this feature:
BLAST of CF418031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
PPK35_SCHPO1.263e-1731.41Serine/threonine-protein kinase ppk35 OS=Schizosac... [more]
ROCK1_RAT4.439e-1740.82Rho-associated protein kinase 1 OS=Rattus norvegic... [more]
ROCK1_RABIT4.440e-1740.82Rho-associated protein kinase 1 OS=Oryctolagus cun... [more]
ROCK1_MOUSE4.440e-1740.82Rho-associated protein kinase 1 OS=Mus musculus GN... [more]
ROCK1_HUMAN4.440e-1740.82Rho-associated protein kinase 1 OS=Homo sapiens GN... [more]
KRAC_DICDI8.189e-1748.81RAC family serine/threonine-protein kinase homolog... [more]
ROCK2_HUMAN2.140e-1639.80Rho-associated protein kinase 2 OS=Homo sapiens GN... [more]
PK3_DICDI5.308e-1645.88Protein kinase 3 OS=Dictyostelium discoideum GN=pk... [more]
KPK1_ARATH6.933e-1645.78Serine/threonine-protein kinase AtPK1/AtPK6 OS=Ara... [more]
PKGA_DICDI7.933e-1645.68Probable serine/threonine-protein kinase pkgA OS=D... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-961 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-012_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF418031 ID=CF418031; Name=CF418031; organism=Citrus sinensis; type=EST; length=624bp
TGATTTCGGCGAAAATGGACGGTCGTGATGATACGGTTAGATTAGGTGCT
CTAAACTTGAAGCCGGCTGCTCGTGAATTCGATTTGGATCCAGACGTGTC
CGTTTCATCGCCGGTGACGAGACAGAAAGCCGCTGCCGCAAAGCAGTTCA
TTGAGAATCATTACAAGAACTACTTGCAAGGATTGCAAGATCGTAAAGAG
AGGCGTAGAGCCCTTCAAATGAGAGCACAACAAGCTGCGGTCTCAAATGA
GGAACAAGAGGAGATGCTGAGGAATTTAGAGCGCAGAGAAACTGAATATA
TGAGGCTGCAGAGGCGTAAAATTGGGATTGATGACTTTGAGCAATTAACT
TTAATTGGAAAAGGTGCATTTGGTGAGGTCAGGTTATGTCGTGCTAAAAC
TACTGGAGAGATCTTTGCCATGAAGAAATTGAAGAAATCGGAGATGCTTA
AACGAGGACAGGTTGAGCATGTTCGATCAGAGAGGAACTTACTTGCAGAG
GTTGATAGTCGGTGCATAGTACAGCTTTTCTACTCTTTTCAAGATTCTGA
TTTCTTATATCTCATCATGGGAGTATTTACCTGGTGGTGACATTATGACA
TTACTAATGAGAGAAGATATTCTT
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