CF418031

Overview
NameCF418031
Unique NameCF418031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: MRCKA_RAT (Serine/threonine-protein kinase MRCK alpha OS=Rattus norvegicus GN=Cdc42bpa PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.026e-15
Identity = 43/108 (39.81%), Postives = 68/108 (62.96%), Query Frame = 3
Query:  255 QEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMGVF 578
            ++ +L  LE  +    ++++ ++  +DFE L +IG+GAFGEV + + K   ++FAMK L K EMLKR +    R ER++L   DS+ I  L Y+FQD + LYL+M  +
Sbjct:   50 EKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYY 157          

HSP 2 Score: 20.7866 bits (42), Expect = 1.026e-15
Identity = 7/14 (50.00%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMR 612
            +Y  GGD++TLL +
Sbjct:  155 DYYVGGDLLTLLSK 168          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: MRCKA_MOUSE (Serine/threonine-protein kinase MRCK alpha OS=Mus musculus GN=Cdc42bpa PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.026e-15
Identity = 43/108 (39.81%), Postives = 68/108 (62.96%), Query Frame = 3
Query:  255 QEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMGVF 578
            ++ +L  LE  +    ++++ ++  +DFE L +IG+GAFGEV + + K   ++FAMK L K EMLKR +    R ER++L   DS+ I  L Y+FQD + LYL+M  +
Sbjct:   50 EKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYY 157          

HSP 2 Score: 20.7866 bits (42), Expect = 1.026e-15
Identity = 7/14 (50.00%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMR 612
            +Y  GGD++TLL +
Sbjct:  155 DYYVGGDLLTLLSK 168          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: Y0701_DICDI (Probable serine/threonine-protein kinase DDB_G0272282 OS=Dictyostelium discoideum GN=DDB_G0272282 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.544e-15
Identity = 40/83 (48.19%), Postives = 58/83 (69.88%), Query Frame = 3
Query:  321 IGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            I I DFE +  I +GAFG V L + K TG+++A+K LKK + +++  V HV  ERN+LA V +  +V+LFY+FQ +D LYL+M
Sbjct: 1522 ISIADFEIIKPISRGAFGRVYLAQKKKTGDLYAIKVLKKLDTIRKNMVNHVIVERNILAMVQNEFVVKLFYAFQSTDKLYLVM 1604          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: ROCK2_BOVIN (Rho-associated protein kinase 2 OS=Bos taurus GN=ROCK2 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.740e-15
Identity = 38/98 (38.78%), Postives = 64/98 (65.31%), Query Frame = 3
Query:  276 LERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            L R E    +++  ++  +D++ + +IG+GAFGEV+L R K + +++AMK L K EM+KR        ER+++A  +S  +VQLF +FQD  +LY++M
Sbjct:   72 LNRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVM 169          

HSP 2 Score: 25.409 bits (54), Expect = 1.740e-15
Identity = 8/17 (47.06%), Postives = 13/17 (76.47%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMREDI 621
            EY+PGGD++ L+   D+
Sbjct:  170 EYMPGGDLVNLMSNYDV 186          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: MRCKA_HUMAN (Serine/threonine-protein kinase MRCK alpha OS=Homo sapiens GN=CDC42BPA PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.251e-15
Identity = 42/108 (38.89%), Postives = 68/108 (62.96%), Query Frame = 3
Query:  255 QEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMGVF 578
            ++ +L  LE  +    ++++ ++  +DFE L +IG+GAFGEV + + K   ++FAMK L K EMLKR +    R ER++L   D++ I  L Y+FQD + LYL+M  +
Sbjct:   50 EKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNKWITTLHYAFQDDNNLYLVMDYY 157          

HSP 2 Score: 20.7866 bits (42), Expect = 2.251e-15
Identity = 7/14 (50.00%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMR 612
            +Y  GGD++TLL +
Sbjct:  155 DYYVGGDLLTLLSK 168          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: ROCK2_MOUSE (Rho-associated protein kinase 2 OS=Mus musculus GN=Rock2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.261e-15
Identity = 38/98 (38.78%), Postives = 64/98 (65.31%), Query Frame = 3
Query:  276 LERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            L R E    +++  ++  +D++ + +IG+GAFGEV+L R K + +++AMK L K EM+KR        ER+++A  +S  +VQLF +FQD  +LY++M
Sbjct:   72 LNRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDRYLYMVM 169          

HSP 2 Score: 25.409 bits (54), Expect = 2.261e-15
Identity = 8/17 (47.06%), Postives = 13/17 (76.47%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMREDI 621
            EY+PGGD++ L+   D+
Sbjct:  170 EYMPGGDLVNLMSNYDV 186          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: ROCK2_RAT (Rho-associated protein kinase 2 OS=Rattus norvegicus GN=Rock2 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.261e-15
Identity = 38/98 (38.78%), Postives = 64/98 (65.31%), Query Frame = 3
Query:  276 LERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            L R E    +++  ++  +D++ + +IG+GAFGEV+L R K + +++AMK L K EM+KR        ER+++A  +S  +VQLF +FQD  +LY++M
Sbjct:   63 LNRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDRYLYMVM 160          

HSP 2 Score: 25.409 bits (54), Expect = 2.261e-15
Identity = 8/17 (47.06%), Postives = 13/17 (76.47%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMREDI 621
            EY+PGGD++ L+   D+
Sbjct:  161 EYMPGGDLVNLMSNYDV 177          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: NDRC_DICDI (Probable serine/threonine-protein kinase ndrC OS=Dictyostelium discoideum GN=ndrC PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.441e-15
Identity = 44/149 (29.53%), Postives = 79/149 (53.02%), Query Frame = 3
Query:  123 QKAAAAKQFIENHYKNYLQGLQDRKEXXXXXXXXXXXXXVSNEEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            +K      +  ++Y+   + L  R               +  +  E+ ++    +ET ++R +R  + + +F+ LT IGKG FG+V L + K TG+I  +K+LKK  +    Q   V  E++++  VD++ I +L YSFQD+++LYL M
Sbjct:  647 EKCKILDNYFNHYYQELFKYLHQRHRRIKTIEDFTVESRMDRQGAEQWMKKQFEKETNFLRNKRAGMKLKEFKILTQIGKGGFGQVFLAQKKDTGDIVTLKRLKKQTVEWANQRNQVSQEKSVML-VDNKWITKLLYSFQDANYLYLAM 794          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: KPK19_ARATH (Serine/threonine-protein kinase AtPK19 OS=Arabidopsis thaliana GN=ATPK19 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 3.441e-15
Identity = 37/83 (44.58%), Postives = 61/83 (73.49%), Query Frame = 3
Query:  321 IGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            +GI+DFE L ++G+GAFG+V   R K T EI+AMK ++K +++++   E++++ER++L ++D   IVQL YSFQ    LYL++
Sbjct:  135 VGIEDFEVLKVVGQGAFGKVYQVRKKDTSEIYAMKVMRKDKIVEKNHAEYMKAERDILTKIDHPFIVQLKYSFQTKYRLYLVL 217          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: CTRO_HUMAN (Citron Rho-interacting kinase OS=Homo sapiens GN=CIT PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.079e-14
Identity = 40/88 (45.45%), Postives = 55/88 (62.50%), Query Frame = 3
Query:  306 LQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            LQ  +    DFE  +L+G G F EV++ R K TG+I+AMK +KK  +L + QV     ERN+L+   S  I QL Y+FQD + LYL+M
Sbjct:   87 LQELQPSAKDFEVRSLVGCGHFAEVQVVREKATGDIYAMKVMKKKALLAQEQVSFFEEERNILSRSTSPWIPQLQYAFQDKNHLYLVM 174          

HSP 2 Score: 24.2534 bits (51), Expect = 1.079e-14
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 1
Query:  571 EYLPGGDIMTLLMR 612
            EY PGGD+++LL R
Sbjct:  175 EYQPGGDLLSLLNR 188          
The following BLAST results are available for this feature:
BLAST of CF418031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
MRCKA_RAT1.026e-1539.81Serine/threonine-protein kinase MRCK alpha OS=Ratt... [more]
MRCKA_MOUSE1.026e-1539.81Serine/threonine-protein kinase MRCK alpha OS=Mus ... [more]
Y0701_DICDI1.544e-1548.19Probable serine/threonine-protein kinase DDB_G0272... [more]
ROCK2_BOVIN1.740e-1538.78Rho-associated protein kinase 2 OS=Bos taurus GN=R... [more]
MRCKA_HUMAN2.251e-1538.89Serine/threonine-protein kinase MRCK alpha OS=Homo... [more]
ROCK2_MOUSE2.261e-1538.78Rho-associated protein kinase 2 OS=Mus musculus GN... [more]
ROCK2_RAT2.261e-1538.78Rho-associated protein kinase 2 OS=Rattus norvegic... [more]
NDRC_DICDI3.441e-1529.53Probable serine/threonine-protein kinase ndrC OS=D... [more]
KPK19_ARATH3.441e-1544.58Serine/threonine-protein kinase AtPK19 OS=Arabidop... [more]
CTRO_HUMAN1.079e-1445.45Citron Rho-interacting kinase OS=Homo sapiens GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-961 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-012_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF418031 ID=CF418031; Name=CF418031; organism=Citrus sinensis; type=EST; length=624bp
TGATTTCGGCGAAAATGGACGGTCGTGATGATACGGTTAGATTAGGTGCT
CTAAACTTGAAGCCGGCTGCTCGTGAATTCGATTTGGATCCAGACGTGTC
CGTTTCATCGCCGGTGACGAGACAGAAAGCCGCTGCCGCAAAGCAGTTCA
TTGAGAATCATTACAAGAACTACTTGCAAGGATTGCAAGATCGTAAAGAG
AGGCGTAGAGCCCTTCAAATGAGAGCACAACAAGCTGCGGTCTCAAATGA
GGAACAAGAGGAGATGCTGAGGAATTTAGAGCGCAGAGAAACTGAATATA
TGAGGCTGCAGAGGCGTAAAATTGGGATTGATGACTTTGAGCAATTAACT
TTAATTGGAAAAGGTGCATTTGGTGAGGTCAGGTTATGTCGTGCTAAAAC
TACTGGAGAGATCTTTGCCATGAAGAAATTGAAGAAATCGGAGATGCTTA
AACGAGGACAGGTTGAGCATGTTCGATCAGAGAGGAACTTACTTGCAGAG
GTTGATAGTCGGTGCATAGTACAGCTTTTCTACTCTTTTCAAGATTCTGA
TTTCTTATATCTCATCATGGGAGTATTTACCTGGTGGTGACATTATGACA
TTACTAATGAGAGAAGATATTCTT
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