CF418031

Overview
NameCF418031
Unique NameCF418031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: Y0670_DICDI (Probable serine/threonine-protein kinase DDB_G0288795 OS=Dictyostelium discoideum GN=DDB_G0288795 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 36/85 (42.35%), Postives = 52/85 (61.18%), Query Frame = 3
Query:  315 RKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            +K+ +DDF  L +IG+GAFG+V L +   TG ++AMK +KK + L    V H  +ER LL +     IV L YSFQ  D L +++
Sbjct:  166 KKVTVDDFIFLRMIGRGAFGQVNLVKKIDTGRLYAMKVIKKDKCLNMNAVGHTFTERKLLKKYYHPFIVGLKYSFQTQDSLCMVL 250          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: SCH9_YEAST (Serine/threonine-protein kinase SCH9 OS=Saccharomyces cerevisiae GN=SCH9 PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 39/93 (41.94%), Postives = 54/93 (58.06%), Query Frame = 3
Query:  297 YMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLL---AEVDSRCIVQLFYSFQDSDFLYLI 566
            Y + ++R  G  DFE L L+GKG FG+V   + K T  I+AMK L K  ++K+ ++ H   ERN+L   A   S  IV L +SFQ    LYL+
Sbjct:  399 YKQTKKRHYGPQDFEVLRLLGKGTFGQVYQVKKKDTQRIYAMKVLSKKVIVKKNEIAHTIGERNILVTTASKSSPFIVGLKFSFQTPTDLYLV 491          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: PDPKB_DICDI (3-phosphoinositide-dependent protein kinase B OS=Dictyostelium discoideum GN=pdkB PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 42/118 (35.59%), Postives = 68/118 (57.63%), Query Frame = 3
Query:  243 SNEEQEEM----LRNLERRETEYMRLQRR-----KIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            +N++Q++       N+E  +T    LQ       K    DF+ +  IGKGA+G+V+L   K T  IFA K L K  ++K  + ++V +E+ +L  +D+  IV+LFY+FQD + LY I+
Sbjct:  231 TNQQQQQQHHHPKHNIELPKTSSFGLQPNSSIPHKKSRSDFDFIRTIGKGAYGKVKLVIEKETQLIFASKILNKKLIIKEKKAKYVNTEKTILDSLDNPNIVKLFYTFQDENNLYFIL 348          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: KAPC_CAEEL (cAMP-dependent protein kinase catalytic subunit OS=Caenorhabditis elegans GN=kin-1 PE=2 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 30/81 (37.04%), Postives = 54/81 (66.67%), Query Frame = 3
Query:  327 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            +DDF+++  +G G+FG V L + K +G  +AMK L K +++K  QVEH  +E+ +L  +D   +V + +SF+D+  LY+++
Sbjct:   78 LDDFDRIKTLGTGSFGRVMLVKHKQSGNYYAMKILDKQKVVKLKQVEHTLNEKRILQAIDFPFLVNMTFSFKDNSNLYMVL 158          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: GRK4_RAT (G protein-coupled receptor kinase 4 OS=Rattus norvegicus GN=Grk4 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 37/109 (33.94%), Postives = 63/109 (57.80%), Query Frame = 3
Query:  249 EEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMGV 575
            E QE    N   R  ++  L+RR +  + F Q  ++GKG FGEV  C+ + TG+++A KKL+K  + KR       +E+ +L ++ SR +V L Y+++  D L L++ +
Sbjct:  160 EYQESTYYN---RFLQWKWLERRPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKLHSRFVVSLAYTYETKDALCLVLTI 265          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: AKT1_CAEEL (Serine/threonine-protein kinase akt-1 OS=Caenorhabditis elegans GN=akt-1 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 33/87 (37.93%), Postives = 55/87 (63.22%), Query Frame = 3
Query:  309 QRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            +R KI ++DF+ L ++GKG FG+V LC+ K T +++A+K LKK  ++ R +V H  +E  +L       + +L YSFQ+  +L  +M
Sbjct:  184 KRDKITMEDFDFLKVLGKGTFGKVILCKEKRTQKLYAIKILKKDVIIAREEVAHTLTENRVLQRCKHPFLTELKYSFQEQHYLCFVM 270          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: RK_BOVIN (Rhodopsin kinase OS=Bos taurus GN=GRK1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.308e-11
Identity = 36/97 (37.11%), Postives = 57/97 (58.76%), Query Frame = 3
Query:  285 RETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMGV 575
            R  ++  L+ + +G D F    ++G+G FGEV  C+ K TG+++A KKL K  + KR   +    E+ +LA+V SR IV L Y+F+    L L+M +
Sbjct:  170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTI 266          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: GRK6_RAT (G protein-coupled receptor kinase 6 OS=Rattus norvegicus GN=Grk6 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.308e-11
Identity = 33/95 (34.74%), Postives = 59/95 (62.11%), Query Frame = 3
Query:  285 RETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            R  ++  L+R+ +  + F Q  ++GKG FGEV  C+ + TG+++A KKL+K  + KR       +E+ +L +V+SR +V L Y+++  D L L++
Sbjct:  169 RFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 263          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: GRK6_MOUSE (G protein-coupled receptor kinase 6 OS=Mus musculus GN=Grk6 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.308e-11
Identity = 33/95 (34.74%), Postives = 59/95 (62.11%), Query Frame = 3
Query:  285 RETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            R  ++  L+R+ +  + F Q  ++GKG FGEV  C+ + TG+++A KKL+K  + KR       +E+ +L +V+SR +V L Y+++  D L L++
Sbjct:  169 RFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 263          
BLAST of CF418031 vs. ExPASy Swiss-Prot
Match: GRK6_HUMAN (G protein-coupled receptor kinase 6 OS=Homo sapiens GN=GRK6 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.308e-11
Identity = 33/95 (34.74%), Postives = 59/95 (62.11%), Query Frame = 3
Query:  285 RETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIM 569
            R  ++  L+R+ +  + F Q  ++GKG FGEV  C+ + TG+++A KKL+K  + KR       +E+ +L +V+SR +V L Y+++  D L L++
Sbjct:  169 RFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 263          
The following BLAST results are available for this feature:
BLAST of CF418031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
Y0670_DICDI1.767e-1142.35Probable serine/threonine-protein kinase DDB_G0288... [more]
SCH9_YEAST1.767e-1141.94Serine/threonine-protein kinase SCH9 OS=Saccharomy... [more]
PDPKB_DICDI1.767e-1135.593-phosphoinositide-dependent protein kinase B OS=D... [more]
KAPC_CAEEL1.767e-1137.04cAMP-dependent protein kinase catalytic subunit OS... [more]
GRK4_RAT1.767e-1133.94G protein-coupled receptor kinase 4 OS=Rattus norv... [more]
AKT1_CAEEL1.767e-1137.93Serine/threonine-protein kinase akt-1 OS=Caenorhab... [more]
RK_BOVIN2.308e-1137.11Rhodopsin kinase OS=Bos taurus GN=GRK1 PE=1 SV=1[more]
GRK6_RAT2.308e-1134.74G protein-coupled receptor kinase 6 OS=Rattus norv... [more]
GRK6_MOUSE2.308e-1134.74G protein-coupled receptor kinase 6 OS=Mus musculu... [more]
GRK6_HUMAN2.308e-1134.74G protein-coupled receptor kinase 6 OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-961 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-012_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF418031 ID=CF418031; Name=CF418031; organism=Citrus sinensis; type=EST; length=624bp
TGATTTCGGCGAAAATGGACGGTCGTGATGATACGGTTAGATTAGGTGCT
CTAAACTTGAAGCCGGCTGCTCGTGAATTCGATTTGGATCCAGACGTGTC
CGTTTCATCGCCGGTGACGAGACAGAAAGCCGCTGCCGCAAAGCAGTTCA
TTGAGAATCATTACAAGAACTACTTGCAAGGATTGCAAGATCGTAAAGAG
AGGCGTAGAGCCCTTCAAATGAGAGCACAACAAGCTGCGGTCTCAAATGA
GGAACAAGAGGAGATGCTGAGGAATTTAGAGCGCAGAGAAACTGAATATA
TGAGGCTGCAGAGGCGTAAAATTGGGATTGATGACTTTGAGCAATTAACT
TTAATTGGAAAAGGTGCATTTGGTGAGGTCAGGTTATGTCGTGCTAAAAC
TACTGGAGAGATCTTTGCCATGAAGAAATTGAAGAAATCGGAGATGCTTA
AACGAGGACAGGTTGAGCATGTTCGATCAGAGAGGAACTTACTTGCAGAG
GTTGATAGTCGGTGCATAGTACAGCTTTTCTACTCTTTTCAAGATTCTGA
TTTCTTATATCTCATCATGGGAGTATTTACCTGGTGGTGACATTATGACA
TTACTAATGAGAGAAGATATTCTT
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