CF503806

Overview
NameCF503806
Unique NameCF503806
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length272
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: GRP78_APLCA (78 kDa glucose-regulated protein OS=Aplysia californica PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 6.961e-41
Identity = 82/90 (91.11%), Postives = 85/90 (94.44%), Query Frame = 2 
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGLNV RIINEPTAAAIAYGLDKK GEKNILVFDLGGGTFDVS+LTIDNGVFEV+STNGDTHLGGEDFDQRVME+FIKL KKK G
Sbjct:  195 DAGTIAGLNVMRIINEPTAAAIAYGLDKKEGEKNILVFDLGGGTFDVSLLTIDNGVFEVVSTNGDTHLGGEDFDQRVMEHFIKLYKKKKG 284
[Close]
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP7D_CAEEL (Heat shock 70 kDa protein D OS=Caenorhabditis elegans GN=hsp-4 PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 1.187e-40
Identity = 81/90 (90.00%), Postives = 85/90 (94.44%), Query Frame = 2 
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGLNV RIINEPTAAAIAYGLDKK GE+NILVFDLGGGTFDVS+LTID+GVFEVL+TNGDTHLGGEDFDQRVMEYFIKL KKK G
Sbjct:  188 DAGSIAGLNVVRIINEPTAAAIAYGLDKKDGERNILVFDLGGGTFDVSLLTIDSGVFEVLATNGDTHLGGEDFDQRVMEYFIKLYKKKSG 277
[Close]
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: GRP78_XENLA (78 kDa glucose-regulated protein OS=Xenopus laevis GN=hspa5 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 2.025e-40
Identity = 81/90 (90.00%), Postives = 85/90 (94.44%), Query Frame = 2 
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGLNV RIINEPTAAAIAYGLDKK GEKNILVFDLGGGTFDVS+LTIDNGVFEV++TNGDTHLGGEDFDQRVME+FIKL KKK G
Sbjct:  187 DAGTIAGLNVMRIINEPTAAAIAYGLDKKEGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTG 276
[Close]
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: GRP78_SPETR (78 kDa glucose-regulated protein OS=Spermophilus tridecemlineatus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 4.512e-40
Identity = 80/90 (88.89%), Postives = 85/90 (94.44%), Query Frame = 2 
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGLNV RIINEPTAAAIAYGLDK+ GEKNILVFDLGGGTFDVS+LTIDNGVFEV++TNGDTHLGGEDFDQRVME+FIKL KKK G
Sbjct:  186 DAGTIAGLNVMRIINEPTAAAIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTG 275
[Close]
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: GRP78_RAT (78 kDa glucose-regulated protein OS=Rattus norvegicus GN=Hspa5 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 4.512e-40
Identity = 80/90 (88.89%), Postives = 85/90 (94.44%), Query Frame = 2 
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGLNV RIINEPTAAAIAYGLDK+ GEKNILVFDLGGGTFDVS+LTIDNGVFEV++TNGDTHLGGEDFDQRVME+FIKL KKK G
Sbjct:  186 DAGTIAGLNVMRIINEPTAAAIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTG 275
[Close]
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: GRP78_PONAB (78 kDa glucose-regulated protein OS=Pongo abelii GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 4.512e-40
Identity = 80/90 (88.89%), Postives = 85/90 (94.44%), Query Frame = 2 
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGLNV RIINEPTAAAIAYGLDK+ GEKNILVFDLGGGTFDVS+LTIDNGVFEV++TNGDTHLGGEDFDQRVME+FIKL KKK G
Sbjct:  186 DAGTIAGLNVMRIINEPTAAAIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTG 275
[Close]
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: GRP78_MOUSE (78 kDa glucose-regulated protein OS=Mus musculus GN=Hspa5 PE=1 SV=3)

HSP 1 Score: 162.925 bits (411), Expect = 4.512e-40
Identity = 80/90 (88.89%), Postives = 85/90 (94.44%), Query Frame = 2 
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGLNV RIINEPTAAAIAYGLDK+ GEKNILVFDLGGGTFDVS+LTIDNGVFEV++TNGDTHLGGEDFDQRVME+FIKL KKK G
Sbjct:  187 DAGTIAGLNVMRIINEPTAAAIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTG 276
[Close]
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: GRP78_MESAU (78 kDa glucose-regulated protein OS=Mesocricetus auratus GN=HSPA5 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 4.512e-40
Identity = 80/90 (88.89%), Postives = 85/90 (94.44%), Query Frame = 2 
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGLNV RIINEPTAAAIAYGLDK+ GEKNILVFDLGGGTFDVS+LTIDNGVFEV++TNGDTHLGGEDFDQRVME+FIKL KKK G
Sbjct:  186 DAGTIAGLNVMRIINEPTAAAIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTG 275
[Close]
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: GRP78_HUMAN (78 kDa glucose-regulated protein OS=Homo sapiens GN=HSPA5 PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 4.512e-40
Identity = 80/90 (88.89%), Postives = 85/90 (94.44%), Query Frame = 2 
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGLNV RIINEPTAAAIAYGLDK+ GEKNILVFDLGGGTFDVS+LTIDNGVFEV++TNGDTHLGGEDFDQRVME+FIKL KKK G
Sbjct:  186 DAGTIAGLNVMRIINEPTAAAIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTG 275
[Close]
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: GRP78_CHICK (78 kDa glucose-regulated protein OS=Gallus gallus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 4.512e-40
Identity = 80/90 (88.89%), Postives = 85/90 (94.44%), Query Frame = 2 
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG IAGLNV RIINEPTAAAIAYGLDK+ GEKNILVFDLGGGTFDVS+LTIDNGVFEV++TNGDTHLGGEDFDQRVME+FIKL KKK G
Sbjct:  184 DAGTIAGLNVMRIINEPTAAAIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTG 273
The following BLAST results are available for this feature:
BLAST of CF503806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP78_APLCA6.961e-4191.1178 kDa glucose-regulated protein OS=Aplysia califo... [more]
HSP7D_CAEEL1.187e-4090.00Heat shock 70 kDa protein D OS=Caenorhabditis eleg... [more]
GRP78_XENLA2.025e-4090.0078 kDa glucose-regulated protein OS=Xenopus laevis... [more]
GRP78_SPETR4.512e-4088.8978 kDa glucose-regulated protein OS=Spermophilus t... [more]
GRP78_RAT4.512e-4088.8978 kDa glucose-regulated protein OS=Rattus norvegi... [more]
GRP78_PONAB4.512e-4088.8978 kDa glucose-regulated protein OS=Pongo abelii G... [more]
GRP78_MOUSE4.512e-4088.8978 kDa glucose-regulated protein OS=Mus musculus G... [more]
GRP78_MESAU4.512e-4088.8978 kDa glucose-regulated protein OS=Mesocricetus a... [more]
GRP78_HUMAN4.512e-4088.8978 kDa glucose-regulated protein OS=Homo sapiens G... [more]
GRP78_CHICK4.512e-4088.8978 kDa glucose-regulated protein OS=Gallus gallus ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-292 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503806 ID=CF503806; Name=CF503806; organism=Citrus sinensis; type=EST; length=272bp
GGATGCTGGTATTATTGCTGGGCTAAATGTTGCTAGGATTATCAATGAAC
CAACAGCCGCTGCCATTGCCTATGGATTGGACAAGAAAGGTGGTGAGAAG
AACATTCTTGTCTTTGACCTTGGTGGTGGTACATTTGATGTCAGTATCTT
GACAATTGACAATGGTGTTTTCGAGGTTCTTTCCACAAATGGAGACACTC
ATTTGGGAGGTGAGGACTTTGATCAGAGGGTTATGGAGTACTTTATTAAA
TTGATCAAGAAGAAGCATGGAA
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