CF503806

Overview
NameCF503806
Unique NameCF503806
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length272
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP7A_DROME (Heat shock 70 kDa protein cognate 1 OS=Drosophila melanogaster GN=Hsc70-1 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.651e-32
Identity = 64/90 (71.11%), Postives = 80/90 (88.89%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG IAGLNV RIINEPTAAAIAYGLDK+G  E+N+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD R++ +F++  ++KH
Sbjct:  160 DAGAIAGLNVLRIINEPTAAAIAYGLDKQGTSERNVLIFDLGGGTFDVSVLTIEDGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFQRKH 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: GRP78_SCHPO (78 kDa glucose-regulated protein homolog OS=Schizosaccharomyces pombe GN=bip1 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 2.651e-32
Identity = 65/89 (73.03%), Postives = 77/89 (86.52%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG IAGLNV RI+NEPTAAAIAYGLDK   EK+I+V+DLGGGTFDVS+L+IDNGVFEVL+T+GDTHLGGEDFD RV+ Y  +   +K+
Sbjct:  191 DAGTIAGLNVIRIVNEPTAAAIAYGLDKTDTEKHIVVYDLGGGTFDVSLLSIDNGVFEVLATSGDTHLGGEDFDNRVINYLARTYNRKN 279          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 3.463e-32
Identity = 67/92 (72.83%), Postives = 77/92 (83.70%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG---GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG I GLNV RIINEPTAAAIAYGLDKKG   GEKN+L+FDLGGGTFDVSILTI++G+FEV ST GDTHLGGEDFD  ++ +  +  K+KH
Sbjct:  161 DAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNSMVSHLAEEFKRKH 252          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.523e-32
Identity = 67/88 (76.14%), Postives = 77/88 (87.50%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKK 262
            DAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++G+FEV ST GDTHLGGEDFD R++ +FI   K+
Sbjct:  160 DAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKR 247          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP76_SAGOE (Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.523e-32
Identity = 64/90 (71.11%), Postives = 80/90 (88.89%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG IAGLNV RIINEPTAAAIA+GLD++G GE+N+L+FDLGGGTFDVS+L+ID GVFEV +T GDTHLGGEDFD R++ +F++  ++KH
Sbjct:  162 DAGAIAGLNVLRIINEPTAAAIAHGLDRRGAGERNVLIFDLGGGTFDVSVLSIDAGVFEVKATAGDTHLGGEDFDNRLVNHFVEEFRRKH 251          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP72_PICAN (Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 PE=3 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 4.523e-32
Identity = 65/90 (72.22%), Postives = 80/90 (88.89%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLDKK  GE+N+L+FDLGGGTFDVS+L+I++G+FEV +T GDTHLGGEDFD R++ +FI   K+K+
Sbjct:  158 DAGLIAGLNVMRIINEPTAAAIAYGLDKKSQGEQNVLIFDLGGGTFDVSLLSIEDGIFEVKATAGDTHLGGEDFDNRLVNHFINEFKRKN 247          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.907e-32
Identity = 64/90 (71.11%), Postives = 79/90 (87.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDK-KGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYG+DK    E+N+L+FDLGGGTFDVSILTI++G+FEV +T GDTHLGGEDFD R++ +F++  K+KH
Sbjct:  162 DAGVIAGLNVLRIINEPTAAAIAYGMDKGMSRERNVLIFDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKH 251          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP7C_DANRE (Heat shock cognate 71 kDa protein OS=Danio rerio GN=hspa8 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 7.714e-32
Identity = 66/90 (73.33%), Postives = 78/90 (86.67%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG I+GLNV  IINEPTAAAIAYGLDKK G E+N+L+FDLGGG+FDVSILTI++G+FEV ST GDTHLGGEDFD R++ +FI   K+KH
Sbjct:  160 DAGTISGLNVLVIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGSFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFITEFKRKH 249          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 135.191 bits (339), Expect = 1.008e-31
Identity = 65/90 (72.22%), Postives = 79/90 (87.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG IAGLNV RIINEPTAAAIAYGLDKK   EKN+L+FDLGGGTFDVS+L+I++G+FEV +T GDTHLGGEDFD R++ +FI+  K+K+
Sbjct:  158 DAGTIAGLNVMRIINEPTAAAIAYGLDKKSEAEKNVLIFDLGGGTFDVSLLSIEDGIFEVKATAGDTHLGGEDFDNRLVNFFIQEFKRKN 247          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP70_PLAFA (Heat shock 70 kDa protein OS=Plasmodium falciparum PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 1.008e-31
Identity = 66/90 (73.33%), Postives = 79/90 (87.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG IAGLNV RIINEPTAAAIAYGL KKG GEKNIL+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD R++ + ++  K+K+
Sbjct:  172 DAGTIAGLNVMRIINEPTAAAIAYGLHKKGKGEKNILIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVNFCVEDFKRKN 261          
The following BLAST results are available for this feature:
BLAST of CF503806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7A_DROME2.651e-3271.11Heat shock 70 kDa protein cognate 1 OS=Drosophila ... [more]
GRP78_SCHPO2.651e-3273.0378 kDa glucose-regulated protein homolog OS=Schizo... [more]
HSP72_BOVIN3.463e-3272.83Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]
HSP7C_CRIGR4.523e-3276.14Heat shock cognate 71 kDa protein OS=Cricetulus gr... [more]
HSP76_SAGOE4.523e-3271.11Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN... [more]
HSP72_PICAN4.523e-3272.22Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 ... [more]
HSP70_ONCTS5.907e-3271.11Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HSP7C_DANRE7.714e-3273.33Heat shock cognate 71 kDa protein OS=Danio rerio G... [more]
HSP72_CANAL1.008e-3172.22Heat shock protein SSA2 OS=Candida albicans GN=SSA... [more]
HSP70_PLAFA1.008e-3173.33Heat shock 70 kDa protein OS=Plasmodium falciparum... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-292 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503806 ID=CF503806; Name=CF503806; organism=Citrus sinensis; type=EST; length=272bp
GGATGCTGGTATTATTGCTGGGCTAAATGTTGCTAGGATTATCAATGAAC
CAACAGCCGCTGCCATTGCCTATGGATTGGACAAGAAAGGTGGTGAGAAG
AACATTCTTGTCTTTGACCTTGGTGGTGGTACATTTGATGTCAGTATCTT
GACAATTGACAATGGTGTTTTCGAGGTTCTTTCCACAAATGGAGACACTC
ATTTGGGAGGTGAGGACTTTGATCAGAGGGTTATGGAGTACTTTATTAAA
TTGATCAAGAAGAAGCATGGAA
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