CF503806

Overview
NameCF503806
Unique NameCF503806
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length272
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 6.977e-33
Identity = 68/92 (73.91%), Postives = 78/92 (84.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG---GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG I GLNV RIINEPTAAAIAYGLDKKG   GEKN+L+FDLGGGTFDVSILTI++G+FEV ST GDTHLGGEDFD R++ +  +  K+KH
Sbjct:  161 DAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKH 252          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 6.977e-33
Identity = 66/90 (73.33%), Postives = 79/90 (87.78%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLDKK  GE+N+L+FDLGGGTFDVS+LTI+ G+FEV +T GDTHLGGEDFD R++ +F+   K+KH
Sbjct:  158 DAGLIAGLNVLRIINEPTAAAIAYGLDKKVEGERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVTEFKRKH 247          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP70_CLAHE (Heat shock 70 kDa protein OS=Cladosporium herbarum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 6.977e-33
Identity = 68/90 (75.56%), Postives = 77/90 (85.56%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLDKK  GEKN+L+FDLGGGTFDVS LTI+ G+FEV ST GDTHLGGEDFD R++ +F    K+KH
Sbjct:  158 DAGLIAGLNVLRIINEPTAAAIAYGLDKKQEGEKNVLIFDLGGGTFDVSFLTIEEGIFEVKSTAGDTHLGGEDFDNRLVNHFSNEFKRKH 247          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HS71L_RAT (Heat shock 70 kDa protein 1-like OS=Rattus norvegicus GN=Hspa1l PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 6.977e-33
Identity = 66/90 (73.33%), Postives = 80/90 (88.89%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLDK   GE+++L+FDLGGGTFDVSILTID+G+FEV +T GDTHLGGEDFD R++ +F++  K+KH
Sbjct:  162 DAGVIAGLNVLRIINEPTAAAIAYGLDKGSHGERHVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKH 251          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HS71L_MOUSE (Heat shock 70 kDa protein 1-like OS=Mus musculus GN=Hspa1l PE=2 SV=4)

HSP 1 Score: 139.043 bits (349), Expect = 6.977e-33
Identity = 66/90 (73.33%), Postives = 80/90 (88.89%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLDK   GE+++L+FDLGGGTFDVSILTID+G+FEV +T GDTHLGGEDFD R++ +F++  K+KH
Sbjct:  162 DAGVIAGLNVLRIINEPTAAAIAYGLDKGSHGERHVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKH 251          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: BIP2_DICDI (Luminal-binding protein 2 OS=Dictyostelium discoideum GN=bip2 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 6.977e-33
Identity = 67/91 (73.63%), Postives = 80/91 (87.91%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKGG-EKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHG 271
            DAG+IAGL V R+INEPTAAA+AYG D  G  EKNILV+DLGGGTFDVS+L+I++GVFEV STNGDTHLGGEDFDQRVM++F+ + +KK G
Sbjct:  188 DAGVIAGLEVLRVINEPTAAALAYGFDATGDKEKNILVYDLGGGTFDVSVLSIEDGVFEVRSTNGDTHLGGEDFDQRVMKHFLTVFQKKTG 278          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 9.113e-33
Identity = 66/92 (71.74%), Postives = 80/92 (86.96%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG---GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLDKK    GEKN+L+FDLGGGTFDVS+LTI+ G+FEV +T GDTHLGGEDFD R++ +F++  K+K+
Sbjct:  164 DAGVIAGLNVMRIINEPTAAAIAYGLDKKASSAGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKN 255          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 9.113e-33
Identity = 66/92 (71.74%), Postives = 80/92 (86.96%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG---GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLDKK    GEKN+L+FDLGGGTFDVS+LTI+ G+FEV +T GDTHLGGEDFD R++ +F++  K+K+
Sbjct:  164 DAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKN 255          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 9.113e-33
Identity = 66/92 (71.74%), Postives = 80/92 (86.96%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG---GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLDKK    GEKN+L+FDLGGGTFDVS+LTI+ G+FEV +T GDTHLGGEDFD R++ +F++  K+K+
Sbjct:  164 DAGVIAGLNVLRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKN 255          
BLAST of CF503806 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 9.113e-33
Identity = 66/92 (71.74%), Postives = 80/92 (86.96%), Query Frame = 2
Query:    2 DAGIIAGLNVARIINEPTAAAIAYGLDKKG---GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 268
            DAG+IAGLNV RIINEPTAAAIAYGLDKK    GEKN+L+FDLGGGTFDVS+LTI+ G+FEV +T GDTHLGGEDFD R++ +F++  K+K+
Sbjct:  162 DAGVIAGLNVMRIINEPTAAAIAYGLDKKATSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKN 253          
The following BLAST results are available for this feature:
BLAST of CF503806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_CAPHI6.977e-3373.91Heat shock-related 70 kDa protein 2 OS=Capra hircu... [more]
HSP70_EMENI6.977e-3373.33Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HSP70_CLAHE6.977e-3375.56Heat shock 70 kDa protein OS=Cladosporium herbarum... [more]
HS71L_RAT6.977e-3373.33Heat shock 70 kDa protein 1-like OS=Rattus norvegi... [more]
HS71L_MOUSE6.977e-3373.33Heat shock 70 kDa protein 1-like OS=Mus musculus G... [more]
BIP2_DICDI6.977e-3373.63Luminal-binding protein 2 OS=Dictyostelium discoid... [more]
HSP7C_PETHY9.113e-3371.74Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP73_ARATH9.113e-3371.74Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP72_ARATH9.113e-3371.74Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP70_MAIZE9.113e-3371.74Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-292 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503806 ID=CF503806; Name=CF503806; organism=Citrus sinensis; type=EST; length=272bp
GGATGCTGGTATTATTGCTGGGCTAAATGTTGCTAGGATTATCAATGAAC
CAACAGCCGCTGCCATTGCCTATGGATTGGACAAGAAAGGTGGTGAGAAG
AACATTCTTGTCTTTGACCTTGGTGGTGGTACATTTGATGTCAGTATCTT
GACAATTGACAATGGTGTTTTCGAGGTTCTTTCCACAAATGGAGACACTC
ATTTGGGAGGTGAGGACTTTGATCAGAGGGTTATGGAGTACTTTATTAAA
TTGATCAAGAAGAAGCATGGAA
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