CF503816
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF503816 vs. ExPASy Swiss-Prot
Match: G3P_RABIT (Glyceraldehyde-3-phosphate dehydrogenase OS=Oryctolagus cuniculus GN=GAPDH PE=1 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 1.689e-18 Identity = 43/88 (48.86%), Postives = 60/88 (68.18%), Query Frame = 1 Query: 28 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 291 VK+G+NGFGRIGRLV R V++VA+NDPFI YM YMF+YDS HG++ H +K ++ K ++ G K +T+F R+P I W + Sbjct: 2 VKVGVNGFGRIGRLVTRAAFNSGKVDVVAINDPFIDLHYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KAITIFQERDPANIKWGD 87
BLAST of CF503816 vs. ExPASy Swiss-Prot
Match: G3P_PHANO (Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeosphaeria nodorum GN=GPD1 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.689e-18 Identity = 45/88 (51.14%), Postives = 62/88 (70.45%), Query Frame = 1 Query: 28 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 291 VK+GINGFGRIGR+V R ++ +DVE+VAVNDPFI Y YM KYDS HGQ+K ++KV+ + + G K + + ++P IPW+E Sbjct: 3 VKVGINGFGRIGRIVFRNAIEHNDVEIVAVNDPFIEPHYAAYMLKYDSQHGQFK-GDIKVEGNDLTING-KTIRFYTEKDPANIPWSE 88
BLAST of CF503816 vs. ExPASy Swiss-Prot
Match: G3P_CURLU (Glyceraldehyde-3-phosphate dehydrogenase OS=Curvularia lunata GN=GPD PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.689e-18 Identity = 47/88 (53.41%), Postives = 59/88 (67.05%), Query Frame = 1 Query: 28 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 291 VK+GINGFGRIGR+V R ++ +DVE+VAVNDPFI Y YM KYDS HGQ+K ++KV D L K V ++P IPW+E Sbjct: 3 VKVGINGFGRIGRIVFRNAIEHNDVEIVAVNDPFIEPHYAAYMLKYDSTHGQFK-GDIKV-DGNNLTVNGKTVRFHMEKDPANIPWSE 88
BLAST of CF503816 vs. ExPASy Swiss-Prot
Match: G3PT_DANRE (Glyceraldehyde 3-phosphate dehydrogenase, testis-specific OS=Danio rerio GN=gapdhs PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.689e-18 Identity = 45/91 (49.45%), Postives = 64/91 (70.33%), Query Frame = 1 Query: 19 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 291 M ++ +GINGFGRIGRLV R LQ+ +++ A+NDPFI YM YMFKYDS HG++K E+ ++D K ++ G+ ++VF P EIPW + Sbjct: 1 MSELCVGINGFGRIGRLVLRACLQKG-IKVTAINDPFIDLQYMVYMFKYDSTHGRYK-GEVHMEDGKLIVDGQ-AISVFQCMKPAEIPWGD 88
BLAST of CF503816 vs. ExPASy Swiss-Prot
Match: G3P1_GLORO (Glyceraldehyde-3-phosphate dehydrogenase 1 (Fragment) OS=Globodera rostochiensis GN=GPD-1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.689e-18 Identity = 47/97 (48.45%), Postives = 61/97 (62.89%), Query Frame = 1 Query: 19 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK------PVTVFGVRNPEEIPWAE 291 M K K+GINGFGRIGRL R +++D V++VA+NDPFI DYM YMF YDS HG++ K+ L EK + VF +++P EI WAE Sbjct: 1 MVKPKVGINGFGRIGRLALRAAVEKDTVQVVAINDPFIELDYMVYMFNYDSTHGRFNG---KISTSAGNLVVEKEGKATHTIKVFNLKDPAEIKWAE 94
BLAST of CF503816 vs. ExPASy Swiss-Prot
Match: G3P_SPECI (Glyceraldehyde-3-phosphate dehydrogenase OS=Spermophilus citellus GN=GAPDH PE=2 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 2.205e-18 Identity = 42/88 (47.73%), Postives = 61/88 (69.32%), Query Frame = 1 Query: 28 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 291 VK+G+NGFGRIGRLV R V++VA+NDPFI +YM YMF+YDS HG++ H +K ++ K ++ G K +++F R+P I W + Sbjct: 2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KSISIFQERDPANIKWGD 87
BLAST of CF503816 vs. ExPASy Swiss-Prot
Match: G3P_MUSPF (Glyceraldehyde-3-phosphate dehydrogenase OS=Mustela putorius furo GN=GAPDH PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.205e-18 Identity = 42/88 (47.73%), Postives = 61/88 (69.32%), Query Frame = 1 Query: 28 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 291 VK+G+NGFGRIGRLV R V++VA+NDPFI +YM YMF+YDS HG++ H +K ++ K ++ G K +++F R+P I W + Sbjct: 2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KSISIFQERDPANIKWGD 87
BLAST of CF503816 vs. ExPASy Swiss-Prot
Match: G3P_CANFA (Glyceraldehyde-3-phosphate dehydrogenase OS=Canis familiaris GN=GAPDH PE=2 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 2.205e-18 Identity = 42/88 (47.73%), Postives = 61/88 (69.32%), Query Frame = 1 Query: 28 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 291 VK+G+NGFGRIGRLV R V++VA+NDPFI +YM YMF+YDS HG++ H +K ++ K ++ G K +++F R+P I W + Sbjct: 2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KSISIFQERDPANIKWGD 87
BLAST of CF503816 vs. ExPASy Swiss-Prot
Match: G3P3_CAEBR (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Caenorhabditis briggsae GN=gpd-3 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.205e-18 Identity = 47/96 (48.96%), Postives = 63/96 (65.62%), Query Frame = 1 Query: 19 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWK---HHE----LKVKDDKTLLFGEKPVTVFGVRNPEEIPW 285 M K +GINGFGRIGRLV R +++D V +VAVNDPFI+ DYM Y+F+YDS HG++K HE L K+ K+ + + V+ R+P EI W Sbjct: 1 MSKPSVGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGDYLLVAKEGKS----QHKIKVYNSRDPAEIQW 92
BLAST of CF503816 vs. ExPASy Swiss-Prot
Match: G3P_COLLI (Glyceraldehyde-3-phosphate dehydrogenase OS=Columba livia GN=GAPDH PE=2 SV=3) HSP 1 Score: 90.5077 bits (223), Expect = 2.880e-18 Identity = 43/88 (48.86%), Postives = 61/88 (69.32%), Query Frame = 1 Query: 28 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAE 291 VK+G+NGFGRIGRLV R + V++VA+NDPFI +YM YMFKYDS HG ++ +K ++ K ++ G +T+F R+P I WA+ Sbjct: 2 VKVGVNGFGRIGRLVTRAAILSAKVQVVAINDPFIDLNYMVYMFKYDSTHGHFR-GTVKAENGKLVING-NAITIFQERDPSNIKWAD 87 The following BLAST results are available for this feature:
BLAST of CF503816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 182
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503816 ID=CF503816; Name=CF503816; organism=Citrus sinensis; type=EST; length=291bpback to top |