CF503857
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBA8_BOVIN (Tubulin alpha-8 chain OS=Bos taurus GN=TUBA8 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.829e-20 Identity = 40/107 (37.38%), Postives = 64/107 (59.81%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MRE + + GQ G QIG+ WE+ C EHG+ G + + + +++E G++VPRAV++DLEP +D +R+G Y +F P+ + G+ A NN+A+GH Sbjct: 1 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFGAQASKIHDDDSFTTFFSETGNGKHVPRAVMVDLEPTVVDEVRAGTYRHLFHPEQLITGKEDAANNYARGH 107
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBA2_EMENI (Tubulin alpha-2 chain OS=Emericella nidulans GN=tubB PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 8.919e-20 Identity = 41/106 (38.68%), Postives = 64/106 (60.38%), Query Frame = 3 Query: 12 EILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLE-RINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 E+ HI GQ G Q+G+ WE+ EHG+ G+ + ED+ ++ E G+YVPR++ +DL+P +D IR+GPY Q+F P+ + G+ A NN+A+GH Sbjct: 4 EVCHIHIGQAGTQLGNSAWELYLLEHGLGADGRLDPEKGEDINAGGSFETFFTETGSGKYVPRSIFVDLDPSPIDEIRTGPYRQLFHPEQLISGKEDAANNYARGH 109
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBA1_YEAST (Tubulin alpha-1 chain OS=Saccharomyces cerevisiae GN=TUB1 PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 8.919e-20 Identity = 44/109 (40.37%), Postives = 68/109 (62.39%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQ--LERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MRE++ I GQ G QIG+ WE+ EHG+ P G DG+ + E + +++E G++VPRA+ +DLEP +D +R+GPY +F P+ + G+ A NN+A+GH Sbjct: 1 MREVISINVGQAGCQIGNACWELYSLEHGIKPDGHLE-DGLSKPKGGEEGFSTFFHETGYGKFVPRAIYVDLEPNVIDEVRNGPYKDLFHPEQLISGKEDAANNYARGH 108
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBA1_NEUCR (Tubulin alpha-A chain OS=Neurospora crassa GN=tba-1 PE=2 SV=3) HSP 1 Score: 95.5153 bits (236), Expect = 8.919e-20 Identity = 41/105 (39.05%), Postives = 66/105 (62.86%), Query Frame = 3 Query: 12 EILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 E++HI GQ G Q+G+ WE+ EHG+ G+ D + + ++ E+S G+YVPR++ +DL+P +D IR+GPY Q+F P+ + G+ A NN+A+GH Sbjct: 4 EVVHIHLGQAGTQLGNSAWELYLLEHGLTQDGRKDPDSTVAGEGGSYDTFFTESSNGKYVPRSLFVDLDPSPIDEIRTGPYRQLFHPELLISGKEDAANNYARGH 108
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBAN_GUITH (Tubulin alpha chain, nucleomorph OS=Guillardia theta GN=tubA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.165e-19 Identity = 41/107 (38.32%), Postives = 65/107 (60.75%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MRE+L I GQ G Q+G+ WE+ C EHG++P G D + + + +++E S G+ VPR V +DLE G +D +++G Y ++ P+ + G A NN+A+GH Sbjct: 1 MREVLSIHIGQAGIQVGNACWELYCLEHGINPDGSIIQDFNKKKNDDAFSTFFSETSTGKRVPRCVFLDLESGVIDEVKNGRYKNLYHPEQLICGNEDAANNYARGH 107
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBG_COPC7 (Tubulin gamma chain OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=TUB4 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.987e-19 Identity = 43/108 (39.81%), Postives = 69/108 (63.89%), Query Frame = 3 Query: 9 REILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQ--SGAGNNWAKGH 326 REI+ +Q GQCGNQ+G+ +W+ +C EHG+ G E +R +V++ +A Y+PRA+L+DLEP +++I + PY ++ P+N + GAGNNWA+G+ Sbjct: 3 REIVTVQLGQCGNQMGAVYWQRLCAEHGISSEGILEEWATEGG--DRKDVFFYQADDEHYIPRAILVDLEPRVINNILASPYANLYNPENIFVSKDGGGAGNNWAQGY 108
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBB1_AVESA (Tubulin beta-1 chain (Fragment) OS=Avena sativa GN=TUBB1 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.595e-19 Identity = 41/43 (95.35%), Postives = 43/43 (100.00%), Query Frame = 3 Query: 198 AVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 AVLMDLEPGTMDS+R+GPYGQIFRPDNFVFGQSGAGNNWAKGH Sbjct: 1 AVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGH 43
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBAB_SCHCO (Tubulin alpha-1B chain OS=Schizophyllum commune GN=TUB-1B PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.595e-19 Identity = 40/107 (37.38%), Postives = 67/107 (62.62%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MRE++ + GQ G QIG+ WE+ EHG+ P G+ D + + + +++E G++VPR + +DLEPG +D +++GPY +F P+ + G+ A NN+A+GH Sbjct: 1 MREVISVHVGQAGVQIGNACWELYTLEHGLSPDGRLMDDSPS--KHDSGSTFFSETGQGKHVPRRLYVDLEPGVIDDVKNGPYRSLFHPETMITGKEDAANNYARGH 105
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBA5_CHICK (Tubulin alpha-5 chain OS=Gallus gallus PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.595e-19 Identity = 40/107 (37.38%), Postives = 63/107 (58.88%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MRE + + GQ G Q+G+ WE+ C EHG+ P G+ D + ++ E G++VPRA+ +DLEP +D +R+G Y Q+F P+ + G+ NN+A+GH Sbjct: 1 MRECISVHVGQAGVQMGNTCWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVPRAIFVDLEPTVIDEVRAGIYRQLFHPEQLITGKEDGANNYARGH 107
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBA2_CHICK (Tubulin alpha-2 chain OS=Gallus gallus PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.595e-19 Identity = 41/107 (38.32%), Postives = 63/107 (58.88%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MRE + + GQ G QIG+ WE+ C EH + P G + D + ++ E S +YVPRA+++DLEP +D +R+G Y +F P+ + G+ A NN+A+GH Sbjct: 1 MRECISVHIGQAGVQIGNACWELFCLEHSIQPDGTFSDPPSSD---DSFATFFRETSMSKYVPRAIMVDLEPTVVDEVRTGTYRHLFHPEQLITGKEDAANNYARGH 104 The following BLAST results are available for this feature:
BLAST of CF503857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 402
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503857 ID=CF503857; Name=CF503857; organism=Citrus sinensis; type=EST; length=328bpback to top |