CF503857
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBA_GIBZE (Tubulin alpha chain OS=Gibberella zeae GN=TUB1 PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 3.389e-19 Identity = 40/107 (37.38%), Postives = 63/107 (58.88%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MRE++ I GQ G QI + WE+ C EHG+ P G + + + +++E G++VPRA+ DLEP +D +R+G Y +F P+ + G+ A NN+A+GH Sbjct: 1 MREVISINVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAQDPDQGFSTFFSETGNGKHVPRAIYCDLEPNVVDEVRTGAYRNLFHPEMMITGKEDASNNYARGH 107
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBA_ONCKE (Tubulin alpha chain OS=Oncorhynchus keta PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.427e-19 Identity = 39/98 (39.80%), Postives = 61/98 (62.24%), Query Frame = 3 Query: 33 GQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 GQ G Q+G+ WE+ C EHG+ P G+ D + N +++E G++VPRA+ +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GH Sbjct: 4 GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTCGGGDDSFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGIYRQLFHPEQLITGKEDAANNYARGH 101
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBA_MYCGR (Tubulin alpha chain OS=Mycosphaerella graminicola PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.781e-19 Identity = 39/107 (36.45%), Postives = 62/107 (57.94%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MRE++ + GQ G QI + WE+ C EHG+ P G + + + +++E G+YVPR + DLEP +D +R+G Y +F P+ + G+ A NN+A+GH Sbjct: 1 MREVISLNVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAAEDDDGFSTFFSETGNGKYVPRTIYADLEPNVVDEVRTGTYRSLFHPELMITGKEDASNNYARGH 107
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBA_SORMA (Tubulin alpha chain OS=Sordaria macrospora GN=TUBA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.551e-19 Identity = 40/107 (37.38%), Postives = 62/107 (57.94%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MREI+ + GQ G QI + WE+ C EHG+ P G + + +++E G+YVPR + DLEP +D +R+G Y +F P++ + G+ A NN+A+GH Sbjct: 1 MREIISLNVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAADPDHGFSTFFSETGNGKYVPRTIYADLEPNVIDEVRTGAYRGLFHPEHMISGKEDASNNYARGH 107
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBA_ASHGO (Tubulin alpha chain OS=Ashbya gossypii GN=TUB1 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.551e-19 Identity = 44/110 (40.00%), Postives = 69/110 (62.73%), Query Frame = 3 Query: 6 MREILHIQG-GQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQ--LERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MRE++ + GQ G QIG+ WE+ EHG+ P G Y +G+ + E + ++NE G++VPRAV +DLEP +D +R+G Y ++F P+ + G+ A NN+A+GH Sbjct: 1 MREVISVNAVGQAGCQIGNACWELYSLEHGIRPDG-YLQEGLTKPKGGEEGFSTFFNETGSGKFVPRAVYVDLEPNVIDEVRTGAYRELFHPEQLISGKEDAANNYARGH 109
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBA2_NEUCR (Tubulin alpha-B chain OS=Neurospora crassa GN=tba-2 PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 7.551e-19 Identity = 40/107 (37.38%), Postives = 62/107 (57.94%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 MREI+ + GQ G QI + WE+ C EHG+ P G + + +++E G+YVPR + DLEP +D +R+G Y +F P++ + G+ A NN+A+GH Sbjct: 1 MREIISLNVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAADPDHGFSTFFSETGNGKYVPRTIYADLEPNVIDEVRTGAYRGLFHPEHMISGKEDASNNYARGH 107
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBAL3_MOUSE (Tubulin alpha chain-like 3 OS=Mus musculus GN=Tubal3 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.862e-19 Identity = 46/113 (40.71%), Postives = 67/113 (59.29%), Query Frame = 3 Query: 6 MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTG---KYRGDGVEDLQLERINV----YYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKG 323 MRE L I GQ G QIG WE+ C EHG+ P G ++ D +E+ ++E +N +++E G++VPR + MDLEP +D IR G Y +F P+ V G+ A N +A+G Sbjct: 1 MRECLSIHIGQAGVQIGDACWELYCLEHGIQPDGFILDHQHDNLENPKVEHMNASLDTFFHETRAGKHVPRTLFMDLEPTVIDGIRVGRYHSLFHPEQLVNGKEDAANTYARG 113
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBG_PLAFO (Tubulin gamma chain OS=Plasmodium falciparum (isolate NF54) GN=G-TUB PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.288e-18 Identity = 41/108 (37.96%), Postives = 68/108 (62.96%), Query Frame = 3 Query: 9 REILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQ--SGAGNNWAKGH 326 REI+ +Q GQCGNQIG +FW+ +C+EH +D G + + L +R ++++ +A ++P A+L DLEP ++SI++ Y ++ P+N + GAGNNW G+ Sbjct: 3 REIITLQCGQCGNQIGVEFWKQLCNEHNIDQEGILKNNNF--LNEDRKDIFFYQADDEHFIPGALLFDLEPRVINSIQTSEYRNLYNPENMFISKEGGGAGNNWGCGY 108
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBA_DICDI (Tubulin alpha chain OS=Dictyostelium discoideum GN=tubA PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.288e-18 Identity = 42/111 (37.84%), Postives = 67/111 (60.36%), Query Frame = 3 Query: 9 REILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQLERIN----VYYNEASGGR-YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 326 REI+ I GQ G Q+G+ WE+ C EHG++ G D + + +N +++E++ G+ VPRA+ +DLEP +D IR+G Y +F P+ + G+ A NN+A+GH Sbjct: 3 REIISIHIGQAGVQVGNSCWELYCLEHGIERDGSIPADRKQSSDVNNLNKDLGTFFSESTNGKKVVPRAIFLDLEPTVIDEIRTGDYKNLFHPEQLITGKEDAANNYARGH 113
BLAST of CF503857 vs. ExPASy Swiss-Prot
Match: TBG2_ARATH (Tubulin gamma-2 chain OS=Arabidopsis thaliana GN=TUBG2 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.682e-18 Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = 3 Query: 9 REILHIQGGQCGNQIGSKFWEVICDEHGVDPTGKYRGDGVEDLQL---ERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQ--SGAGNNWAKGH 326 REI+ +Q GQCGNQIG +FW+ +C EHG+ G +ED +R +V++ +A Y+PRA+L+DLEP ++ I++G Y ++ +N GAGNNWA G+ Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGI-----LEDFATQGGDRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGY 108 The following BLAST results are available for this feature:
BLAST of CF503857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 402
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503857 ID=CF503857; Name=CF503857; organism=Citrus sinensis; type=EST; length=328bpback to top |