CF503860
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: IF4A_CANAL (ATP-dependent RNA helicase eIF4A OS=Candida albicans GN=TIF1 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 7.972e-37 Identity = 68/110 (61.82%), Postives = 94/110 (85.45%), Query Frame = 3 Query: 3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332 RV DMI+R+ +T +K+ +LDE+DEMLS GFK+QIY+++R LP Q+VL+SAT+P ++LE+TTKFM +PV+ILVK+DELTLEGIKQF++ VE E++KFD LCDLYD++ Sbjct: 151 RVLDMIERRYFKTDKVKMFILDEADEMLSSGFKEQIYNIFRLLPETTQIVLLSATMPQDVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVELEDYKFDCLCDLYDSI 260
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: IF4A8_TOBAC (Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 7.972e-37 Identity = 71/110 (64.55%), Postives = 93/110 (84.55%), Query Frame = 3 Query: 3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332 RV DM++R++LR +++ VLDE+DEMLSRGFKDQIYD+++ LP +QV + SAT+P E L++T KFM PV+ILVKRDELTLEGIKQF+V V++EEWK +TLCDLY+TL Sbjct: 168 RVFDMLRRQSLRPDYLRMFVLDEADEMLSRGFKDQIYDIFQMLPTKVQVGVFSATMPPEALDITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETL 277
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: FAL1_KLULA (ATP-dependent RNA helicase FAL1 OS=Kluyveromyces lactis GN=FAL1 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.360e-36 Identity = 73/112 (65.18%), Postives = 93/112 (83.04%), Query Frame = 3 Query: 3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSR--GFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332 RV DMIKR+ L R K+LVLDE+DE+L GFK QIYD++ LPP +QVV++SAT+ +ILE+T KFM+DPVKILVKRDE++L+ IKQ++V VE+EEWKFDTLCDLYD+L Sbjct: 151 RVLDMIKRQVLNVRNCKILVLDEADELLGETLGFKQQIYDIFTKLPPTIQVVVVSATMSKDILEITKKFMSDPVKILVKRDEISLDVIKQYYVDVEKEEWKFDTLCDLYDSL 262
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: FAL1_ASHGO (ATP-dependent RNA helicase FAL1 OS=Ashbya gossypii GN=FAL1 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.776e-36 Identity = 71/112 (63.39%), Postives = 94/112 (83.93%), Query Frame = 3 Query: 3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSR--GFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332 RV DMIKR+ + TR +K+LVLDE+DE+LS GFK Q+YD++ LP +QVV++SAT+ +LE+T KFM+DPVKILVKRDE++LEGIKQ+ + V++EEWKFDTLCDLYD+L Sbjct: 151 RVLDMIKRRIINTRHVKMLVLDEADELLSETLGFKQQLYDIFTKLPSSVQVVVVSATMSKVVLEVTKKFMSDPVKILVKRDEVSLEGIKQYHINVDKEEWKFDTLCDLYDSL 262
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: FAL1_YEAST (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae GN=FAL1 PE=1 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 2.319e-36 Identity = 72/112 (64.29%), Postives = 95/112 (84.82%), Query Frame = 3 Query: 3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSR--GFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332 RV DMIK++ L+TR +++LVLDE+DE+LS GFK QIYD++ LP + QVV++SAT+ +ILE+T KFM DPVKILVKRDE++LEGIKQ+ V V++EEWKFDTLCD+YD+L Sbjct: 152 RVLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKNCQVVVVSATMNKDILEVTRKFMNDPVKILVKRDEISLEGIKQYVVNVDKEEWKFDTLCDIYDSL 263
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: FAL1_YEAS7 (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae (strain YJM789) GN=FAL1 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 2.319e-36 Identity = 72/112 (64.29%), Postives = 95/112 (84.82%), Query Frame = 3 Query: 3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSR--GFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332 RV DMIK++ L+TR +++LVLDE+DE+LS GFK QIYD++ LP + QVV++SAT+ +ILE+T KFM DPVKILVKRDE++LEGIKQ+ V V++EEWKFDTLCD+YD+L Sbjct: 152 RVLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKNCQVVVVSATMNKDILEVTRKFMNDPVKILVKRDEISLEGIKQYVVNVDKEEWKFDTLCDIYDSL 263
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: FAL1_VANPO (ATP-dependent RNA helicase FAL1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=FAL1 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 3.956e-36 Identity = 72/112 (64.29%), Postives = 93/112 (83.04%), Query Frame = 3 Query: 3 RVCDMIKRKTLRTRAIKLLVLDESDEML--SRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332 RV DM KR L TR +++L+LDE+DE+L S GFK QIYD++ LP QVV++SAT+ +ILE+T KFM+DPVKILVKRDE++LEGIKQ++V VE+E+WKFDTLCDLYD+L Sbjct: 152 RVLDMFKRHLLNTRNVQMLILDEADELLGESLGFKQQIYDIFTKLPAACQVVVVSATMSKDILEVTKKFMSDPVKILVKRDEISLEGIKQYYVNVEKEDWKFDTLCDLYDSL 263
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: IF4A_LODEL (ATP-dependent RNA helicase eIF4A OS=Lodderomyces elongisporus GN=TIF1 PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 6.748e-36 Identity = 69/110 (62.73%), Postives = 93/110 (84.55%), Query Frame = 3 Query: 3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332 RV DMI+R+ RT +K+ +LDE+DEMLS GFK+QIY+++R LP QVVL+SAT+P ++LE+TTKFM +PV+ILVK+DELTLEGIKQ+F+ VE E++KFD L DLYD++ Sbjct: 151 RVFDMIERRYFRTDKVKMFILDEADEMLSSGFKEQIYNIFRLLPETTQVVLLSATMPQDVLEVTTKFMNNPVRILVKKDELTLEGIKQYFINVEVEDYKFDCLVDLYDSI 260
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: IF4A_YEAST (ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae GN=TIF1 PE=1 SV=3) HSP 1 Score: 147.517 bits (371), Expect = 1.964e-35 Identity = 69/110 (62.73%), Postives = 92/110 (83.64%), Query Frame = 3 Query: 3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332 RV D I+R+ RT IK+ +LDE+DEMLS GFK+QIY ++ LPP QVVL+SAT+P+++LE+TTKFM +PV+ILVK+DELTLEGIKQF+V VE EE+K++ L DLYD++ Sbjct: 149 RVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLYDSI 258
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: IF4A_YEAS7 (ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae (strain YJM789) GN=TIF1 PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.964e-35 Identity = 69/110 (62.73%), Postives = 92/110 (83.64%), Query Frame = 3 Query: 3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332 RV D I+R+ RT IK+ +LDE+DEMLS GFK+QIY ++ LPP QVVL+SAT+P+++LE+TTKFM +PV+ILVK+DELTLEGIKQF+V VE EE+K++ L DLYD++ Sbjct: 149 RVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLYDSI 258 The following BLAST results are available for this feature:
BLAST of CF503860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503860 ID=CF503860; Name=CF503860; organism=Citrus sinensis; type=EST; length=333bpback to top |