CF503860
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: DD19A_HUMAN (ATP-dependent RNA helicase DDX19A OS=Homo sapiens GN=DDX19A PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.617e-13 Identity = 40/105 (38.10%), Postives = 63/105 (60.00%), Query Frame = 3 Query: 21 KRKTLRTRAIKLLVLDESDEMLS-RGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332 K K + + IK+ VLDE+D M++ +G +DQ + R LP + Q++L SAT + + K + DP I +KR+E TL+ IKQ++V + KF LC+LY + Sbjct: 226 KLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAI 330
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: DBP5_CANGA (ATP-dependent RNA helicase DBP5 OS=Candida glabrata GN=DBP5 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.617e-13 Identity = 38/108 (35.19%), Postives = 65/108 (60.19%), Query Frame = 3 Query: 12 DMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332 D+I+RK ++ + +K+ VLDE+D ML + G DQ V ++LP D Q+VL SAT + K + + + ++R+E+ ++ IKQ ++ E K++ LC+LY L Sbjct: 243 DLIRRKLIQLQNVKIFVLDEADNMLDKQGLGDQCIRVKKFLPKDTQLVLFSATFADAVKAYAQKVIPNANTLELQRNEVNVKAIKQLYMDCNDEAHKYEVLCELYGLL 350
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: DBP5_YEAST (ATP-dependent RNA helicase DBP5 OS=Saccharomyces cerevisiae GN=DBP5 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.112e-13 Identity = 39/107 (36.45%), Postives = 65/107 (60.75%), Query Frame = 3 Query: 6 VCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 323 V D+++RK ++ + IK+ VLDE+D ML + G DQ V R+LP D Q+VL SAT + + K + + + ++ +E+ ++ IKQ ++ + E KFD L +LY Sbjct: 219 VLDLMRRKLMQLQKIKIFVLDEADNMLDQQGLGDQCIRVKRFLPKDTQLVLFSATFADAVRQYAKKIVPNANTLELQTNEVNVDAIKQLYMDCKNEADKFDVLTELY 325
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: DBP5_YEAS7 (ATP-dependent RNA helicase DBP5 OS=Saccharomyces cerevisiae (strain YJM789) GN=DBP5 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.112e-13 Identity = 39/107 (36.45%), Postives = 65/107 (60.75%), Query Frame = 3 Query: 6 VCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 323 V D+++RK ++ + IK+ VLDE+D ML + G DQ V R+LP D Q+VL SAT + + K + + + ++ +E+ ++ IKQ ++ + E KFD L +LY Sbjct: 219 VLDLMRRKLMQLQKIKIFVLDEADNMLDQQGLGDQCIRVKRFLPKDTQLVLFSATFADAVRQYAKKIVPNANTLELQTNEVNVDAIKQLYMDCKNEADKFDVLTELY 325
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: DDX25_BOVIN (ATP-dependent RNA helicase DDX25 OS=Bos taurus GN=DDX25 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.759e-13 Identity = 36/102 (35.29%), Postives = 63/102 (61.76%), Query Frame = 3 Query: 21 KRKTLRTRAIKLLVLDESDEML-SRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 323 KRK + I++ VLDE+D M+ ++GF+DQ + R LP + Q++L SAT + + + + DP I ++++ELTL I+Q++V + K+ LC++Y Sbjct: 232 KRKLIDLTKIRVFVLDEADVMIDTQGFEDQSIRIQRALPSECQMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIY 333
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: DBPA_BACSU (ATP-dependent RNA helicase dbpA OS=Bacillus subtilis GN=dbpA PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 2.759e-13 Identity = 43/109 (39.45%), Postives = 66/109 (60.55%), Query Frame = 3 Query: 3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDT 329 RV D I++ TL + LV+DE+DEML+ GF +Q+ + ++LP + +L SATLP +I +++ ++M +P I VK LT I+ + V REE KF L D+ T Sbjct: 130 RVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPTERTTMLFSATLPQDIEKLSRQYMQNPEHIEVKAAGLTTRNIEHAVIQV-REENKFSLLKDVLMT 237
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: DD19A_BOVIN (ATP-dependent RNA helicase DDX19A OS=Bos taurus GN=DDX19A PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.603e-13 Identity = 39/105 (37.14%), Postives = 63/105 (60.00%), Query Frame = 3 Query: 21 KRKTLRTRAIKLLVLDESDEMLS-RGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332 K K + + IK+ VLDE+D M++ +G +DQ + R LP + Q++L SAT + + K + DP I +KR+E TL+ IKQ++V + KF LC++Y + Sbjct: 226 KLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNSRDEKFQALCNIYGAI 330
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: DBP5_YARLI (ATP-dependent RNA helicase DBP5 OS=Yarrowia lipolytica GN=DBP5 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.146e-13 Identity = 37/109 (33.94%), Postives = 61/109 (55.96%), Query Frame = 3 Query: 6 VCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332 V ++++K + + +K+ VLDE+D M+ + +YLP QVVL SAT P +L++ K +P +I +K +EL ++ I Q ++ E E KF L +LY L Sbjct: 226 VAGLLQKKQIDAKHVKVFVLDEADNMVDSSMGSTCARIKKYLPSSTQVVLFSATFPESVLDLAGKMCPNPNEIRLKANELNVDAITQLYMDCEDGEEKFKMLEELYSML 334
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: DDX59_HUMAN (Probable ATP-dependent RNA helicase DDX59 OS=Homo sapiens GN=DDX59 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.027e-13 Identity = 31/94 (32.98%), Postives = 59/94 (62.77%), Query Frame = 3 Query: 3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVE 284 R+ D+IK+ ++ +K++V+DE+D ML GF+ Q+ D+ +P D Q +L+SAT+P I ++ ++ + +PV+I+ L ++Q + VE Sbjct: 332 RLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCANVRQIILWVE 425
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: DBP5_SCLS1 (ATP-dependent RNA helicase dbp5 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dbp5 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.048e-12 Identity = 43/107 (40.19%), Postives = 62/107 (57.94%), Query Frame = 3 Query: 6 VCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 323 V D+IKRK++ +K+L LDE+D ML + G DQ V + + Q++L SAT P E+ +F +I +KRDELT+ GIKQ F+ E K++ L LY Sbjct: 198 VMDLIKRKSIDASQMKVLCLDEADNMLDQQGLGDQCLRVKSMIKVE-QILLFSATFPDEVYGFAQQFSPRANEIKLKRDELTVSGIKQMFMDCPNEVGKYEILVKLY 303 The following BLAST results are available for this feature:
BLAST of CF503860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF503860 ID=CF503860; Name=CF503860; organism=Citrus sinensis; type=EST; length=333bpback to top |