CF503860

Overview
NameCF503860
Unique NameCF503860
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length333
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4206 contig Csv1_Contig4206:531..863. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: FAL1_SCLS1 (ATP-dependent RNA helicase fal1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=fal1 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.004e-47
Identity = 86/110 (78.18%), Postives = 105/110 (95.45%), Query Frame = 3 
Query:    3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332
            RV DMI+R+ LRTR IK+LVLDE+DE+L+RGF++QIYDVYRYLPP  QVV++SATLP+++L+MTTKFMTDPV+ILVKRDELTLEG+KQ+F+AVE+EEWKFDTLCDLYDTL
Sbjct:  153 RVADMIRRRNLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEKEEWKFDTLCDLYDTL 262
[Close]
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: FAL1_NEOFI (ATP-dependent RNA helicase fal1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=fal1 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 1.311e-47
Identity = 86/110 (78.18%), Postives = 105/110 (95.45%), Query Frame = 3 
Query:    3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332
            RV DMI+R+ LRTR IK+LVLDE+DE+L+RGF++QIYDVYRYLPP  QVV++SATLP+++L+MTTKFMTDPV++LVKRDELTLEGIKQ+F+AVE+EEWKFDTLCDLYDTL
Sbjct:  153 RVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWKFDTLCDLYDTL 262
[Close]
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: FAL1_EMENI (ATP-dependent RNA helicase fal1 OS=Emericella nidulans GN=fal1 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 1.311e-47
Identity = 86/110 (78.18%), Postives = 105/110 (95.45%), Query Frame = 3 
Query:    3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332
            RV DMI+R+ LRTR IK+LVLDE+DE+L+RGF++QIYDVYRYLPP  QVV++SATLP+++L+MTTKFMTDPV++LVKRDELTLEGIKQ+F+AVE+EEWKFDTLCDLYDTL
Sbjct:  153 RVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWKFDTLCDLYDTL 262
[Close]
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: FAL1_ASPTN (ATP-dependent RNA helicase fal1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=fal1 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 1.311e-47
Identity = 86/110 (78.18%), Postives = 105/110 (95.45%), Query Frame = 3 
Query:    3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332
            RV DMI+R+ LRTR IK+LVLDE+DE+L+RGF++QIYDVYRYLPP  QVV++SATLP+++L+MTTKFMTDPV++LVKRDELTLEGIKQ+F+AVE+EEWKFDTLCDLYDTL
Sbjct:  153 RVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWKFDTLCDLYDTL 262
[Close]
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: FAL1_ASPOR (ATP-dependent RNA helicase fal1 OS=Aspergillus oryzae GN=fal1 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 1.311e-47
Identity = 86/110 (78.18%), Postives = 105/110 (95.45%), Query Frame = 3 
Query:    3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332
            RV DMI+R+ LRTR IK+LVLDE+DE+L+RGF++QIYDVYRYLPP  QVV++SATLP+++L+MTTKFMTDPV++LVKRDELTLEGIKQ+F+AVE+EEWKFDTLCDLYDTL
Sbjct:  152 RVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWKFDTLCDLYDTL 261
[Close]
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: FAL1_ASPNC (ATP-dependent RNA helicase fal1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=fal1 PE=3 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 1.311e-47
Identity = 86/110 (78.18%), Postives = 105/110 (95.45%), Query Frame = 3 
Query:    3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332
            RV DMI+R+ LRTR IK+LVLDE+DE+L+RGF++QIYDVYRYLPP  QVV++SATLP+++L+MTTKFMTDPV++LVKRDELTLEGIKQ+F+AVE+EEWKFDTLCDLYDTL
Sbjct:  153 RVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWKFDTLCDLYDTL 262
[Close]
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: FAL1_ASPFU (ATP-dependent RNA helicase fal1 OS=Aspergillus fumigatus GN=fal1 PE=3 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 1.311e-47
Identity = 86/110 (78.18%), Postives = 105/110 (95.45%), Query Frame = 3 
Query:    3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332
            RV DMI+R+ LRTR IK+LVLDE+DE+L+RGF++QIYDVYRYLPP  QVV++SATLP+++L+MTTKFMTDPV++LVKRDELTLEGIKQ+F+AVE+EEWKFDTLCDLYDTL
Sbjct:  152 RVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWKFDTLCDLYDTL 261
[Close]
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: FAL1_ASPCL (ATP-dependent RNA helicase fal1 OS=Aspergillus clavatus GN=fal1 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 1.311e-47
Identity = 86/110 (78.18%), Postives = 105/110 (95.45%), Query Frame = 3 
Query:    3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332
            RV DMI+R+ LRTR IK+LVLDE+DE+L+RGF++QIYDVYRYLPP  QVV++SATLP+++L+MTTKFMTDPV++LVKRDELTLEGIKQ+F+AVE+EEWKFDTLCDLYDTL
Sbjct:  153 RVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWKFDTLCDLYDTL 262
[Close]
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: FAL1_AJECN (ATP-dependent RNA helicase FAL1 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=FAL1 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.712e-47
Identity = 86/110 (78.18%), Postives = 105/110 (95.45%), Query Frame = 3 
Query:    3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332
            RV DMI+R+ LRTR IK+LVLDE+DE+L+RGF++QIYDVYRYLPP  QVV++SATLP+++L+MTTKFMTDPV+ILVKRDELTLEG+KQ+F+AVE+EEWKFDTLCDLYDTL
Sbjct:  153 RVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEKEEWKFDTLCDLYDTL 262
[Close]
BLAST of CF503860 vs. ExPASy Swiss-Prot
Match: FAL1_BOTFB (ATP-dependent RNA helicase fal1 OS=Botryotinia fuckeliana (strain B05.10) GN=fal1 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 2.236e-47
Identity = 85/110 (77.27%), Postives = 105/110 (95.45%), Query Frame = 3 
Query:    3 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 332
            RV DMI+R+ LRTR IK+LVLDE+DE+L+RGF++QIYDVYRYLPP  QVV++SATLP+++L+MTTKFMTDPV+ILVKRDELTLEG+KQ+F+AVE+E+WKFDTLCDLYDTL
Sbjct:  153 RVADMIRRRNLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEKEDWKFDTLCDLYDTL 262
The following BLAST results are available for this feature:
BLAST of CF503860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 238
Match NameE-valueIdentityDescription
FAL1_SCLS11.004e-4778.18ATP-dependent RNA helicase fal1 OS=Sclerotinia scl... [more]
FAL1_NEOFI1.311e-4778.18ATP-dependent RNA helicase fal1 OS=Neosartorya fis... [more]
FAL1_EMENI1.311e-4778.18ATP-dependent RNA helicase fal1 OS=Emericella nidu... [more]
FAL1_ASPTN1.311e-4778.18ATP-dependent RNA helicase fal1 OS=Aspergillus ter... [more]
FAL1_ASPOR1.311e-4778.18ATP-dependent RNA helicase fal1 OS=Aspergillus ory... [more]
FAL1_ASPNC1.311e-4778.18ATP-dependent RNA helicase fal1 OS=Aspergillus nig... [more]
FAL1_ASPFU1.311e-4778.18ATP-dependent RNA helicase fal1 OS=Aspergillus fum... [more]
FAL1_ASPCL1.311e-4778.18ATP-dependent RNA helicase fal1 OS=Aspergillus cla... [more]
FAL1_AJECN1.712e-4778.18ATP-dependent RNA helicase FAL1 OS=Ajellomyces cap... [more]
FAL1_BOTFB2.236e-4777.27ATP-dependent RNA helicase fal1 OS=Botryotinia fuc... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-347 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503860 ID=CF503860; Name=CF503860; organism=Citrus sinensis; type=EST; length=333bp
GTAGAGTCTGTGATATGATTAAGAGGAAAACTTTGCGTACTAGAGCTATT
AAATTATTGGTGCTTGATGAGTCTGATGAGATGCTGAGCAGAGGGTTCAA
GGATCAAATTTATGATGTGTACCGTTATCTTCCACCGGATCTTCAGGTTG
TTTTGATATCTGCCACCCTTCCTCACGAAATATTGGAGATGACGACCAAA
TTCATGACAGATCCTGTAAAGATTCTTGTGAAGCGTGATGAGTTGACTTT
GGAGGGAATCAAGCAATTTTTTGTTGCAGTGGAAAGAGAGGAGTGGAAGT
TTGATACACTCTGTGATCTTTATGATACCCTTA
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