CF503863

Overview
NameCF503863
Unique NameCF503863
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length414
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2010 contig Csv1_Contig2010:48..461. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: LIP4_ARATH (GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana GN=LIP4 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.040e-20
Identity = 52/104 (50.00%), Postives = 65/104 (62.50%), Query Frame = 1
Query:  109 PAVYNFGDSNSDTGGISAAMTQ-VPPPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVG-TNFRNGANFATGGSSIRPGGFSPFHLGIQISQFIQF 414
            P ++NFGDSNSDTGG+ A +   +  PNG  FF   +GR  DGRL+ID + + +    L PYLDS+G T F+NGANFA  GS   P    PF L IQ+ QF  F
Sbjct:   39 PVIFNFGDSNSDTGGLVAGLGYPIGFPNGRLFFRRSTGRLSDGRLLIDFLCQSLNTSLLRPYLDSLGRTRFQNGANFAIAGSPTLPKNV-PFSLNIQVKQFSHF 141          
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: GDL9_ARATH (GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana GN=At1g28600 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.076e-17
Identity = 50/115 (43.48%), Postives = 65/115 (56.52%), Query Frame = 1
Query:  106 FPAVYNFGDSNSDTGGISAAM--TQVP----PPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGG------SSIRPGGFSP---FHLGIQISQF 405
            F ++ +FGDS +DTG +       Q+P    PP GE+FF HP+GR CDGR+I+D IAE V LPY+ PY  S   NF  G NFA  G      S ++  G  P     LG+Q+  F
Sbjct:   29 FKSIISFGDSIADTGNLVGLSDRNQLPVTAFPPYGETFFHHPTGRSCDGRIIMDFIAEFVGLPYVPPYFGSKNRNFDKGVNFAVAGATALKSSFLKKRGIQPHTNVSLGVQLKSF 143          
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: GDL16_ARATH (GDSL esterase/lipase At1g31550 OS=Arabidopsis thaliana GN=At1g31550 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.339e-17
Identity = 49/117 (41.88%), Postives = 63/117 (53.85%), Query Frame = 1
Query:  106 FPAVYNFGDSNSDTGGISAAM--TQVP----PPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGGSSIRPGGF---------SPFHLGIQISQFIQ 411
            F ++ +FGDS +DTG +        +P    PP GE+FF HP+GRF DGRLIID IAE + LPY+ PY  S   NF  G NFA   ++     F           F LG+Q+  F Q
Sbjct:   34 FESIISFGDSIADTGNLLGLSDHNNLPMSAFPPYGETFFHHPTGRFSDGRLIIDFIAEFLGLPYVPPYFGSTNGNFEKGVNFAVASATALESSFLEEKGYHCPHNFSLGVQLKIFKQ 150          
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: GDL7_ARATH (GDSL esterase/lipase At1g28580 OS=Arabidopsis thaliana GN=At1g28580 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.029e-16
Identity = 51/139 (36.69%), Postives = 73/139 (52.52%), Query Frame = 1
Query:   37 LPIFAFMGGPMATMGGASLKGCGFPAVYNFGDSNSDTGGISAAMT--QVP----PPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGGSSIRPGGF----------SPFHLGIQISQF 405
            L +F F+   + T   +  K   F ++ +FGDS +DTG +        +P    PP GE+FF HP+GRF +GRLIID IAE + LP + P+  S   NF  G NFA GG++     F          +   LG+Q++ F
Sbjct:   12 LLVFIFLSTFVVTNVSSETKCREFKSIISFGDSIADTGNLLGLSDPKDLPHMAFPPYGENFFHHPTGRFSNGRLIIDFIAEFLGLPLVPPFYGSHNANFEKGVNFAVGGATALERSFLEDRGIHFPYTNVSLGVQLNSF 150          
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: GDL40_ARATH (GDSL esterase/lipase At2g27360 OS=Arabidopsis thaliana GN=At2g27360 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.650e-16
Identity = 42/88 (47.73%), Postives = 58/88 (65.91%), Query Frame = 1
Query:  106 FPAVYNFGDSNSDTGGIS--AAMTQVP----PPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGGSS 351
            F ++ +FGDS +DTG +   ++   +P    PP GE+FF HPSGRF DGRLIID IAE + +P++ P+  S   NF  G NFA GG++
Sbjct:   31 FKSIISFGDSITDTGNLLGLSSPNDLPESAFPPYGETFFHHPSGRFSDGRLIIDFIAEFLGIPHVPPFYGSKNGNFEKGVNFAVGGAT 118          
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: GDL6_ARATH (GDSL esterase/lipase At1g28570 OS=Arabidopsis thaliana GN=At1g28570 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.527e-15
Identity = 41/88 (46.59%), Postives = 55/88 (62.50%), Query Frame = 1
Query:  106 FPAVYNFGDSNSDTGGISAAM--TQVPP----PNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGGSS 351
            F ++ +FGDS +DTG + A    T +P     P GE+FF HP+GRF +GRLIID IAE +  P + P+  S   NF  G NFA GG++
Sbjct:   32 FKSIISFGDSIADTGNLLALSDPTNLPKVAFLPYGETFFHHPTGRFSNGRLIIDFIAEFLGFPLVPPFYGSQNANFEKGVNFAVGGAT 119          
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: GDL83_ARATH (GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana GN=At5g45910 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.899e-14
Identity = 43/97 (44.33%), Postives = 56/97 (57.73%), Query Frame = 1
Query:  106 FPAVYNFGDSNSDTGGISAAMTQVPP-----PNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTN----FRNGANFATGGSSIRPGGF 369
            + +++NFGDS SDTG    +     P     P G++FF   +GR  DGRLIID IAE   LPY+ PYL S+ TN    F+ GANFA  G++     F
Sbjct:   28 YESIFNFGDSLSDTGNFLLSGDVDSPNIGRLPYGQTFFNRSTGRCSDGRLIIDFIAEASGLPYIPPYLQSLRTNDSVDFKRGANFAVAGATANEFSF 124          
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: GDL8_ARATH (GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana GN=At1g28590 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 5.525e-14
Identity = 38/88 (43.18%), Postives = 53/88 (60.23%), Query Frame = 1
Query:  106 FPAVYNFGDSNSDTGGISAAM--TQVP----PPNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGGSS 351
            F ++ +FGDS +DTG +        +P    PP GE+FF HP+GR+ DGRLIID IAE +  P + P+      NF+ G NFA  G++
Sbjct:   34 FKSIISFGDSIADTGNLLGLSDPNDLPASAFPPYGETFFHHPTGRYSDGRLIIDFIAEFLGFPLVPPFYGCQNANFKKGVNFAVAGAT 121          
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: GDL12_ARATH (GDSL esterase/lipase At1g28660 OS=Arabidopsis thaliana GN=At1g28660 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.525e-14
Identity = 48/118 (40.68%), Postives = 63/118 (53.39%), Query Frame = 1
Query:  106 FPAVYNFGDSNSDTGGIS--AAMTQVPP----PNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGGSSIR----------PGGFSPFHLGIQISQFIQ 411
            F ++ +FGDS +DTG I   + +  +P     P GESFF  PSGR  DGRLIID IAE + LPY+ PY  S   +F  G NFA  G++               F+   LG+Q+  F Q
Sbjct:   33 FTSIISFGDSIADTGNILHLSDVNHLPQTAFFPYGESFFHPPSGRASDGRLIIDFIAEFLGLPYVPPYFGSQNVSFEQGINFAVYGATALDRAYFVAKGIESDFTNVSLGVQLDIFKQ 150          
BLAST of CF503863 vs. ExPASy Swiss-Prot
Match: GDL11_ARATH (GDSL esterase/lipase At1g28650 OS=Arabidopsis thaliana GN=At1g28650 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.231e-13
Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = 1
Query:  106 FPAVYNFGDSNSDTGGIS--AAMTQVPP----PNGESFFGHPSGRFCDGRLIIDLIAEKVKLPYLSPYLDSVGTNFRNGANFATGGSS-------IRPG---GFSPFHLGIQISQFIQ 411
            + ++ +FGDS +DTG     + +  +P     P GESFF  PSGR+ DGRL+ID IAE + LPY+ PY  S   +F  G NFA  G++       ++ G    F+   L +Q++ F Q
Sbjct:   35 YKSIISFGDSIADTGNYVHLSNVNNLPQAAFLPYGESFFHPPSGRYSDGRLVIDFIAEFLGLPYVPPYFGSQNVSFNQGINFAVYGATALDRAFLVKQGIKSDFTNISLSVQLNTFKQ 152          
The following BLAST results are available for this feature:
BLAST of CF503863 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
LIP4_ARATH1.040e-2050.00GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana... [more]
GDL9_ARATH1.076e-1743.48GDSL esterase/lipase At1g28600 OS=Arabidopsis thal... [more]
GDL16_ARATH5.339e-1741.88GDSL esterase/lipase At1g31550 OS=Arabidopsis thal... [more]
GDL7_ARATH2.029e-1636.69GDSL esterase/lipase At1g28580 OS=Arabidopsis thal... [more]
GDL40_ARATH2.650e-1647.73GDSL esterase/lipase At2g27360 OS=Arabidopsis thal... [more]
GDL6_ARATH6.527e-1546.59GDSL esterase/lipase At1g28570 OS=Arabidopsis thal... [more]
GDL83_ARATH1.899e-1444.33GDSL esterase/lipase At5g45910 OS=Arabidopsis thal... [more]
GDL8_ARATH5.525e-1443.18GDSL esterase/lipase At1g28590 OS=Arabidopsis thal... [more]
GDL12_ARATH5.525e-1440.68GDSL esterase/lipase At1g28660 OS=Arabidopsis thal... [more]
GDL11_ARATH1.231e-1338.14GDSL esterase/lipase At1g28650 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-350 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_F05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503863 ID=CF503863; Name=CF503863; organism=Citrus sinensis; type=EST; length=414bp
GAGCCTGTCGATATAAGGTTATTTTATGCATACCTGCTTCCCATCTTTGC
GTTCATGGGAGGACCAATGGCAACAATGGGTGGCGCCAGTTTAAAGGGAT
GTGGGTTCCCCGCTGTGTACAATTTCGGTGACTCAAATTCAGACACCGGA
GGAATCTCAGCTGCAATGACGCAAGTTCCTCCACCAAATGGTGAATCTTT
CTTTGGACACCCATCAGGAAGATTTTGTGACGGCCGTCTCATCATTGATT
TAATTGCTGAGAAAGTGAAGTTGCCATATCTGAGTCCGTACCTGGATTCA
GTGGGCACAAATTTCAGGAATGGTGCCAATTTTGCAACTGGAGGGTCATC
TATTCGACCTGGTGGCTTTAGTCCATTCCATCTTGGCATTCAAATTTCCC
AATTTATACAATTC
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