CF503875

Overview
NameCF503875
Unique NameCF503875
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length216
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF503875 vs. ExPASy Swiss-Prot
Match: KCS21_ARATH (3-ketoacyl-CoA synthase 21 OS=Arabidopsis thaliana GN=KCS21 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.630e-16
Identity = 35/68 (51.47%), Postives = 50/68 (73.53%), Query Frame = 1 
Query:    1 YNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSN 204
            YNL G+GCSA +ISID+   + +   N+ ALV+S E +  +WY G DRS ++SNCLFR GG+++LL+N
Sbjct:  165 YNLSGLGCSASVISIDIVQRMFETRENALALVVSTETMGPHWYCGKDRSMMLSNCLFRAGGSSVLLTN 232
The following BLAST results are available for this feature:
BLAST of CF503875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
KCS21_ARATH7.630e-1651.473-ketoacyl-CoA synthase 21 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-362 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503875 ID=CF503875; Name=CF503875; organism=Citrus sinensis; type=EST; length=216bp
TACAATTTGGGAGGGATGGGCTGCAGTGCAGGTTTGATTTCAATTGATCT
TGCAAACAATCTTCTTCAGGTTCATCCCAACTCTTATGCATTGGTTATTA
GCATGGAGAACATCACATTGAATTGGTACTTTGGAAATGATCGGTCAAAG
CTTGTTTCAAATTGCTTATTCCGGATGGGAGGGGCTGCAATATTGCTTTC
AAACAGATTCTCTGAC
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