CF503877

Overview
NameCF503877
Unique NameCF503877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length303
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 1433T_BOVIN (14-3-3 protein theta OS=Bos taurus GN=YWHAQ PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.668e-16
Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 2
Query:  119 AKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEE 301
            AKLAEQAERYD+M   MK V     EL+ EERNLLSV YKNV+G RR++WR++SSIEQK +
Sbjct:   10 AKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTD 70          
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 14331_ECHMU (14-3-3 protein homolog 1 OS=Echinococcus multilocularis PE=2 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 3.484e-16
Identity = 42/66 (63.64%), Postives = 51/66 (77.27%), Query Frame = 2
Query:  101 ENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKE 298
            +  V  AKLAEQAERYD+M  A K +A +  EL  EERNLLSV YKNV+GARR+SWRI+SSI +K+
Sbjct:   14 DELVQRAKLAEQAERYDDMAGACKTMAEMGNELNNEERNLLSVAYKNVLGARRSSWRIMSSIAKKQ 79          
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 1433S_SHEEP (14-3-3 protein sigma OS=Ovis aries GN=SFN PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.324e-15
Identity = 40/66 (60.61%), Postives = 49/66 (74.24%), Query Frame = 2
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQK 295
            R + +  AKLAEQAERY++M   MK       EL+ EERNLLSV YKNV+G +RA+WR+LSSIEQK
Sbjct:    3 RASLIQKAKLAEQAERYEDMAAFMKSAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQK 68          
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 1433S_MOUSE (14-3-3 protein sigma OS=Mus musculus GN=Sfn PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.324e-15
Identity = 40/66 (60.61%), Postives = 49/66 (74.24%), Query Frame = 2
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQK 295
            R + +  AKLAEQAERY++M   MK       EL+ EERNLLSV YKNV+G +RA+WR+LSSIEQK
Sbjct:    3 RASLIQKAKLAEQAERYEDMAAFMKSAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQK 68          
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 1433S_BOVIN (14-3-3 protein sigma OS=Bos taurus GN=SFN PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.324e-15
Identity = 40/66 (60.61%), Postives = 49/66 (74.24%), Query Frame = 2
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQK 295
            R + +  AKLAEQAERY++M   MK       EL+ EERNLLSV YKNV+G +RA+WR+LSSIEQK
Sbjct:    3 RASLIQKAKLAEQAERYEDMAAFMKSAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQK 68          
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 14331_ECHGR (14-3-3 protein homolog 1 OS=Echinococcus granulosus PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.729e-15
Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 2
Query:  101 ENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKE 298
            +  V  AKLAEQAERYD+M  A K +A +  EL  EE NLLSV YKNV+GARR+SWRI+SSI +K+
Sbjct:   14 DELVQRAKLAEQAERYDDMAGACKTMAKMRNELNNEEANLLSVAYKNVVGARRSSWRIMSSIAKKQ 79          
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 1433S_HUMAN (14-3-3 protein sigma OS=Homo sapiens GN=SFN PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.258e-15
Identity = 40/66 (60.61%), Postives = 49/66 (74.24%), Query Frame = 2
Query:   98 RENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQK 295
            R + +  AKLAEQAERY++M   MK       EL+ EERNLLSV YKNV+G +RA+WR+LSSIEQK
Sbjct:    3 RASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQK 68          
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: 14331_SCHMA (14-3-3 protein homolog 1 OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.121e-14
Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = 2
Query:  104 NFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQK 295
            + V+IAKLAEQAERYD+M  AMK+       L  EERNLLSV YKNV+GARR++WR++   E K
Sbjct:   16 DLVHIAKLAEQAERYDDMAAAMKRYTEASGNLGNEERNLLSVAYKNVVGARRSAWRVIHGSEMK 79          
BLAST of CF503877 vs. ExPASy Swiss-Prot
Match: U4976_SOYBN (UPF0497 membrane protein 6 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.709e-13
Identity = 36/42 (85.71%), Postives = 40/42 (95.24%), Query Frame = 2
Query:   89 TKIRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEER 214
            +K RENFVYIAKLAEQAERY+EMV++MK VANLDVELTVEER
Sbjct:    4 SKDRENFVYIAKLAEQAERYEEMVESMKNVANLDVELTVEER 45          
The following BLAST results are available for this feature:
BLAST of CF503877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
1433T_BOVIN2.668e-1665.5714-3-3 protein theta OS=Bos taurus GN=YWHAQ PE=2 S... [more]
14331_ECHMU3.484e-1663.6414-3-3 protein homolog 1 OS=Echinococcus multilocu... [more]
1433S_SHEEP1.324e-1560.6114-3-3 protein sigma OS=Ovis aries GN=SFN PE=2 SV=... [more]
1433S_MOUSE1.324e-1560.6114-3-3 protein sigma OS=Mus musculus GN=Sfn PE=1 S... [more]
1433S_BOVIN1.324e-1560.6114-3-3 protein sigma OS=Bos taurus GN=SFN PE=2 SV=... [more]
14331_ECHGR1.729e-1562.1214-3-3 protein homolog 1 OS=Echinococcus granulosu... [more]
1433S_HUMAN2.258e-1560.6114-3-3 protein sigma OS=Homo sapiens GN=SFN PE=1 S... [more]
14331_SCHMA1.121e-1459.3814-3-3 protein homolog 1 OS=Schistosoma mansoni PE... [more]
U4976_SOYBN4.709e-1385.71UPF0497 membrane protein 6 OS=Glycine max PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-364 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503877 ID=CF503877; Name=CF503877; organism=Citrus sinensis; type=EST; length=303bp
ATCTTCTCCTCTCCTTCTGAGTTCTCAGTTCTCAGTTCTCAGTTCTCACA
TTACAGTACTGCTTGTAAAAGCAAAAGATTCGCCATGGACAAAGATCCGT
GAAAACTTCGTTTACATCGCCAAGCTTGCTGAACAAGCTGAACGATACGA
CGAAATGGTTGATGCAATGAAAAAGGTAGCGAATCTTGACGTGGAACTGA
CTGTGGAGGAGAGAAACTTACTCTCGGTTGGGTATAAGAATGTGATTGGT
GCACGTAGAGCATCATGGAGGATTCTTTCGTCGATAGAGCAGAAAGAAGA
GGC
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