CF503880

Overview
NameCF503880
Unique NameCF503880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length417
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF503880 vs. ExPASy Swiss-Prot
Match: EFTU_BACCQ (Elongation factor Tu OS=Bacillus cereus (strain Q1) GN=tuf PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.160e-20
Identity = 46/64 (71.88%), Postives = 55/64 (85.94%), Query Frame = 3 
Query:  225 ATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAH 416
            A F R+K HVN+GTIGHVDHGKTTLTAAIT VLA+ G A+A  +D+ID APEE++RGITI+TAH
Sbjct:    4 AKFERSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQIDAAPEERERGITISTAH 67
[Close]
BLAST of CF503880 vs. ExPASy Swiss-Prot
Match: EFTU_BACC7 (Elongation factor Tu OS=Bacillus cereus (strain AH187) GN=tuf PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.160e-20
Identity = 46/64 (71.88%), Postives = 55/64 (85.94%), Query Frame = 3 
Query:  225 ATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAH 416
            A F R+K HVN+GTIGHVDHGKTTLTAAIT VLA+ G A+A  +D+ID APEE++RGITI+TAH
Sbjct:    4 AKFERSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQIDAAPEERERGITISTAH 67
[Close]
BLAST of CF503880 vs. ExPASy Swiss-Prot
Match: EFTU_BACC4 (Elongation factor Tu OS=Bacillus cereus (strain B4264) GN=tuf PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.160e-20
Identity = 46/64 (71.88%), Postives = 55/64 (85.94%), Query Frame = 3 
Query:  225 ATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAH 416
            A F R+K HVN+GTIGHVDHGKTTLTAAIT VLA+ G A+A  +D+ID APEE++RGITI+TAH
Sbjct:    4 AKFERSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQIDAAPEERERGITISTAH 67
[Close]
BLAST of CF503880 vs. ExPASy Swiss-Prot
Match: EFTU_BACC3 (Elongation factor Tu OS=Bacillus cereus (strain 03BB102) GN=tuf PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.160e-20
Identity = 46/64 (71.88%), Postives = 55/64 (85.94%), Query Frame = 3 
Query:  225 ATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAH 416
            A F R+K HVN+GTIGHVDHGKTTLTAAIT VLA+ G A+A  +D+ID APEE++RGITI+TAH
Sbjct:    4 AKFERSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQIDAAPEERERGITISTAH 67
[Close]
BLAST of CF503880 vs. ExPASy Swiss-Prot
Match: EFTU_BACC2 (Elongation factor Tu OS=Bacillus cereus (strain G9842) GN=tuf PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.160e-20
Identity = 46/64 (71.88%), Postives = 55/64 (85.94%), Query Frame = 3 
Query:  225 ATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAH 416
            A F R+K HVN+GTIGHVDHGKTTLTAAIT VLA+ G A+A  +D+ID APEE++RGITI+TAH
Sbjct:    4 AKFERSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQIDAAPEERERGITISTAH 67
[Close]
BLAST of CF503880 vs. ExPASy Swiss-Prot
Match: EFTU_BACC1 (Elongation factor Tu OS=Bacillus cereus (strain ATCC 10987) GN=tuf PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.160e-20
Identity = 46/64 (71.88%), Postives = 55/64 (85.94%), Query Frame = 3 
Query:  225 ATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAH 416
            A F R+K HVN+GTIGHVDHGKTTLTAAIT VLA+ G A+A  +D+ID APEE++RGITI+TAH
Sbjct:    4 AKFERSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQIDAAPEERERGITISTAH 67
[Close]
BLAST of CF503880 vs. ExPASy Swiss-Prot
Match: EFTU_BACC0 (Elongation factor Tu OS=Bacillus cereus (strain AH820) GN=tuf PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.160e-20
Identity = 46/64 (71.88%), Postives = 55/64 (85.94%), Query Frame = 3 
Query:  225 ATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAH 416
            A F R+K HVN+GTIGHVDHGKTTLTAAIT VLA+ G A+A  +D+ID APEE++RGITI+TAH
Sbjct:    4 AKFERSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQIDAAPEERERGITISTAH 67
[Close]
BLAST of CF503880 vs. ExPASy Swiss-Prot
Match: EFTU_BACAN (Elongation factor Tu OS=Bacillus anthracis GN=tuf PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.160e-20
Identity = 46/64 (71.88%), Postives = 55/64 (85.94%), Query Frame = 3 
Query:  225 ATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAH 416
            A F R+K HVN+GTIGHVDHGKTTLTAAIT VLA+ G A+A  +D+ID APEE++RGITI+TAH
Sbjct:    4 AKFERSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQIDAAPEERERGITISTAH 67
[Close]
BLAST of CF503880 vs. ExPASy Swiss-Prot
Match: EFTU_BACAH (Elongation factor Tu OS=Bacillus thuringiensis (strain Al Hakam) GN=tuf PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.160e-20
Identity = 46/64 (71.88%), Postives = 55/64 (85.94%), Query Frame = 3 
Query:  225 ATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAH 416
            A F R+K HVN+GTIGHVDHGKTTLTAAIT VLA+ G A+A  +D+ID APEE++RGITI+TAH
Sbjct:    4 AKFERSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQIDAAPEERERGITISTAH 67
[Close]
BLAST of CF503880 vs. ExPASy Swiss-Prot
Match: EFTU_BACAC (Elongation factor Tu OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=tuf PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.160e-20
Identity = 46/64 (71.88%), Postives = 55/64 (85.94%), Query Frame = 3 
Query:  225 ATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAH 416
            A F R+K HVN+GTIGHVDHGKTTLTAAIT VLA+ G A+A  +D+ID APEE++RGITI+TAH
Sbjct:    4 AKFERSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQIDAAPEERERGITISTAH 67
The following BLAST results are available for this feature:
BLAST of CF503880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_BACCQ5.160e-2071.88Elongation factor Tu OS=Bacillus cereus (strain Q1... [more]
EFTU_BACC75.160e-2071.88Elongation factor Tu OS=Bacillus cereus (strain AH... [more]
EFTU_BACC45.160e-2071.88Elongation factor Tu OS=Bacillus cereus (strain B4... [more]
EFTU_BACC35.160e-2071.88Elongation factor Tu OS=Bacillus cereus (strain 03... [more]
EFTU_BACC25.160e-2071.88Elongation factor Tu OS=Bacillus cereus (strain G9... [more]
EFTU_BACC15.160e-2071.88Elongation factor Tu OS=Bacillus cereus (strain AT... [more]
EFTU_BACC05.160e-2071.88Elongation factor Tu OS=Bacillus cereus (strain AH... [more]
EFTU_BACAN5.160e-2071.88Elongation factor Tu OS=Bacillus anthracis GN=tuf ... [more]
EFTU_BACAH5.160e-2071.88Elongation factor Tu OS=Bacillus thuringiensis (st... [more]
EFTU_BACAC5.160e-2071.88Elongation factor Tu OS=Bacillus anthracis (strain... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-367 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_H01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503880 ID=CF503880; Name=CF503880; organism=Citrus sinensis; type=EST; length=417bp
GTTTTACATACAGCTCGTTTTGAACATACTTTCTCTCACTCGCTCACTCG
GAATCAATGGCTTCGGTGGTTCTTAGAAACCCTAACTCCAAGAGAATTGT
GCCGTTTTCATCCCAAATCTACTCTTGCTGCCGCGGCTCTCTCTCCATCT
CCGACGCTTTCTCCGCAAATGAAACTTCTGCTACTCGCTGCGGCCCCTCT
GTTAACCCCTGGTGGAGATCCATGGCCACCTTCACTCGCACAAAGCTTCA
CGTGAATGTGGGAACAATTGGACACGTTGATCATGGGAAGACTACACTTA
CTGCTGCGATTACCAAGGTGCTAGCAGAAGAAGGGAAAGCAAAAGCTATT
GCCTTTGATGAAATTGACAAGGCCCCTGAAGAGAAGAAGAGAGGAATTAC
TATTGCAACGGCCCATG
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