CF503880

Overview
NameCF503880
Unique NameCF503880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length417
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF503880 vs. ExPASy Swiss-Prot
Match: EFTU_RICSI (Elongation factor Tu OS=Rickettsia sibirica GN=tuf PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.960e-21
Identity = 48/64 (75.00%), Postives = 56/64 (87.50%), Query Frame = 3 
Query:  225 ATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAH 416
            A F RTK HVN+GTIGHVDHGKT+LTAAIT VLA+ G A+A A+D+ID APEEK+RGITI+TAH
Sbjct:    4 AKFERTKPHVNIGTIGHVDHGKTSLTAAITIVLAKTGGAQATAYDQIDAAPEEKERGITISTAH 67
[Close]
BLAST of CF503880 vs. ExPASy Swiss-Prot
Match: EFTU_RICRS (Elongation factor Tu OS=Rickettsia rickettsii (strain Sheila Smith) GN=tuf PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.960e-21
Identity = 48/64 (75.00%), Postives = 56/64 (87.50%), Query Frame = 3 
Query:  225 ATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAH 416
            A F RTK HVN+GTIGHVDHGKT+LTAAIT VLA+ G A+A A+D+ID APEEK+RGITI+TAH
Sbjct:    4 AKFERTKPHVNIGTIGHVDHGKTSLTAAITIVLAKTGGAQATAYDQIDAAPEEKERGITISTAH 67
[Close]
BLAST of CF503880 vs. ExPASy Swiss-Prot
Match: EFTU_RICRO (Elongation factor Tu OS=Rickettsia rickettsii (strain Iowa) GN=tuf PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.960e-21
Identity = 48/64 (75.00%), Postives = 56/64 (87.50%), Query Frame = 3 
Query:  225 ATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAH 416
            A F RTK HVN+GTIGHVDHGKT+LTAAIT VLA+ G A+A A+D+ID APEEK+RGITI+TAH
Sbjct:    4 AKFERTKPHVNIGTIGHVDHGKTSLTAAITIVLAKTGGAQATAYDQIDAAPEEKERGITISTAH 67
[Close]
BLAST of CF503880 vs. ExPASy Swiss-Prot
Match: EFTU_RICRI (Elongation factor Tu OS=Rickettsia rickettsii GN=tuf PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.960e-21
Identity = 48/64 (75.00%), Postives = 56/64 (87.50%), Query Frame = 3 
Query:  225 ATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAH 416
            A F RTK HVN+GTIGHVDHGKT+LTAAIT VLA+ G A+A A+D+ID APEEK+RGITI+TAH
Sbjct:    4 AKFERTKPHVNIGTIGHVDHGKTSLTAAITIVLAKTGGAQATAYDQIDAAPEEKERGITISTAH 67
[Close]
BLAST of CF503880 vs. ExPASy Swiss-Prot
Match: EFTU_RICRH (Elongation factor Tu OS=Rickettsia rhipicephali GN=tuf PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.960e-21
Identity = 48/64 (75.00%), Postives = 56/64 (87.50%), Query Frame = 3 
Query:  225 ATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAH 416
            A F RTK HVN+GTIGHVDHGKT+LTAAIT VLA+ G A+A A+D+ID APEEK+RGITI+TAH
Sbjct:    4 AKFERTKPHVNIGTIGHVDHGKTSLTAAITIVLAKTGGAQATAYDQIDAAPEEKERGITISTAH 67
[Close]
BLAST of CF503880 vs. ExPASy Swiss-Prot
Match: EFTU_RICPU (Elongation factor Tu OS=Rickettsia peacockii (strain Rustic) GN=tuf PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.960e-21
Identity = 48/64 (75.00%), Postives = 56/64 (87.50%), Query Frame = 3 
Query:  225 ATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAH 416
            A F RTK HVN+GTIGHVDHGKT+LTAAIT VLA+ G A+A A+D+ID APEEK+RGITI+TAH
Sbjct:    4 AKFERTKPHVNIGTIGHVDHGKTSLTAAITIVLAKTGGAQATAYDQIDAAPEEKERGITISTAH 67
[Close]
BLAST of CF503880 vs. ExPASy Swiss-Prot
Match: EFTU_RICPA (Elongation factor Tu OS=Rickettsia parkeri GN=tuf PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.960e-21
Identity = 48/64 (75.00%), Postives = 56/64 (87.50%), Query Frame = 3 
Query:  225 ATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAH 416
            A F RTK HVN+GTIGHVDHGKT+LTAAIT VLA+ G A+A A+D+ID APEEK+RGITI+TAH
Sbjct:    4 AKFERTKPHVNIGTIGHVDHGKTSLTAAITIVLAKTGGAQATAYDQIDAAPEEKERGITISTAH 67
[Close]
BLAST of CF503880 vs. ExPASy Swiss-Prot
Match: EFTU_RICM5 (Elongation factor Tu OS=Rickettsia massiliae (strain Mtu5) GN=tuf PE=3 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 7.960e-21
Identity = 48/64 (75.00%), Postives = 56/64 (87.50%), Query Frame = 3 
Query:  225 ATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAH 416
            A F RTK HVN+GTIGHVDHGKT+LTAAIT VLA+ G A+A A+D+ID APEEK+RGITI+TAH
Sbjct:    4 AKFERTKPHVNIGTIGHVDHGKTSLTAAITIVLAKTGGAQATAYDQIDAAPEEKERGITISTAH 67
[Close]
BLAST of CF503880 vs. ExPASy Swiss-Prot
Match: EFTU_RICCN (Elongation factor Tu OS=Rickettsia conorii GN=tuf PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.960e-21
Identity = 48/64 (75.00%), Postives = 56/64 (87.50%), Query Frame = 3 
Query:  225 ATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAH 416
            A F RTK HVN+GTIGHVDHGKT+LTAAIT VLA+ G A+A A+D+ID APEEK+RGITI+TAH
Sbjct:    4 AKFERTKPHVNIGTIGHVDHGKTSLTAAITIVLAKTGGAQATAYDQIDAAPEEKERGITISTAH 67
[Close]
BLAST of CF503880 vs. ExPASy Swiss-Prot
Match: EFTU_RICCK (Elongation factor Tu OS=Rickettsia canadensis (strain McKiel) GN=tuf PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.960e-21
Identity = 48/64 (75.00%), Postives = 56/64 (87.50%), Query Frame = 3 
Query:  225 ATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAH 416
            A F RTK HVN+GTIGHVDHGKT+LTAAIT VLA+ G A+A A+D+ID APEEK+RGITI+TAH
Sbjct:    4 AKFERTKPHVNIGTIGHVDHGKTSLTAAITIVLAKTGGAQATAYDQIDAAPEEKERGITISTAH 67
The following BLAST results are available for this feature:
BLAST of CF503880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_RICSI7.960e-2175.00Elongation factor Tu OS=Rickettsia sibirica GN=tuf... [more]
EFTU_RICRS7.960e-2175.00Elongation factor Tu OS=Rickettsia rickettsii (str... [more]
EFTU_RICRO7.960e-2175.00Elongation factor Tu OS=Rickettsia rickettsii (str... [more]
EFTU_RICRI7.960e-2175.00Elongation factor Tu OS=Rickettsia rickettsii GN=t... [more]
EFTU_RICRH7.960e-2175.00Elongation factor Tu OS=Rickettsia rhipicephali GN... [more]
EFTU_RICPU7.960e-2175.00Elongation factor Tu OS=Rickettsia peacockii (stra... [more]
EFTU_RICPA7.960e-2175.00Elongation factor Tu OS=Rickettsia parkeri GN=tuf ... [more]
EFTU_RICM57.960e-2175.00Elongation factor Tu OS=Rickettsia massiliae (stra... [more]
EFTU_RICCN7.960e-2175.00Elongation factor Tu OS=Rickettsia conorii GN=tuf ... [more]
EFTU_RICCK7.960e-2175.00Elongation factor Tu OS=Rickettsia canadensis (str... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-367 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_H01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503880 ID=CF503880; Name=CF503880; organism=Citrus sinensis; type=EST; length=417bp
GTTTTACATACAGCTCGTTTTGAACATACTTTCTCTCACTCGCTCACTCG
GAATCAATGGCTTCGGTGGTTCTTAGAAACCCTAACTCCAAGAGAATTGT
GCCGTTTTCATCCCAAATCTACTCTTGCTGCCGCGGCTCTCTCTCCATCT
CCGACGCTTTCTCCGCAAATGAAACTTCTGCTACTCGCTGCGGCCCCTCT
GTTAACCCCTGGTGGAGATCCATGGCCACCTTCACTCGCACAAAGCTTCA
CGTGAATGTGGGAACAATTGGACACGTTGATCATGGGAAGACTACACTTA
CTGCTGCGATTACCAAGGTGCTAGCAGAAGAAGGGAAAGCAAAAGCTATT
GCCTTTGATGAAATTGACAAGGCCCCTGAAGAGAAGAAGAGAGGAATTAC
TATTGCAACGGCCCATG
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