CF503889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503889 vs. ExPASy Swiss-Prot
Match: PAPA_CANAL (Poly(A) polymerase PAPa OS=Candida albicans GN=PAPA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.130e-29 Identity = 58/126 (46.03%), Postives = 87/126 (69.05%), Query Frame = 1 Query: 1 QRGYTDQMVEDANAVIFTFGSYRLGAHGPGADIDALCVGPSYVSREEDFFIILHDILAEMEEVSELQPIPDAHVPVMKFKFQGISIDLLYASISLLVVPEDIDISQMSVLNNVDEQTVRSLNGCRV 378 ++ ++ M D IFTFGSYRLG +GPG+DID L V P +VSR DFF + +++L E+ E+ P+PDA VP++K +F GISIDL++A + + VP D+ + ++L N+DE+ +R+LNG RV Sbjct: 68 KKNISEGMARDVGGKIFTFGSYRLGVYGPGSDIDTLVVVPKHVSRN-DFFEVFYELLKGRSELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNIDEKDLRALNGTRV 192
BLAST of CF503889 vs. ExPASy Swiss-Prot
Match: PAPO3_XENLA (Poly(A) polymerase type 3 (Fragment) OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.366e-28 Identity = 60/119 (50.42%), Postives = 83/119 (69.75%), Query Frame = 1 Query: 22 MVEDANAVIFTFGSYRLGAHGPGADIDALCVGPSYVSREEDFFIILHDILAEMEEVSELQPIPDAHVPVMKFKFQGISIDLLYASISLLVVPEDIDISQMSVLNNVDEQTVRSLNGCRV 378 ++E+ IFTFGSYRLG H GADIDALCV P +V R D F ++ L + EEV +L+ + +A VPV+K F GI ID+L+A ++L +PED+D+ S+L N+D + +RSLNGCRV Sbjct: 86 VIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRS-DLFSSFYEKLKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRV 203
BLAST of CF503889 vs. ExPASy Swiss-Prot
Match: PAPOG_MOUSE (Poly(A) polymerase gamma OS=Mus musculus GN=Papolg PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.562e-24 Identity = 55/119 (46.22%), Postives = 78/119 (65.55%), Query Frame = 1 Query: 22 MVEDANAVIFTFGSYRLGAHGPGADIDALCVGPSYVSREEDFFIILHDILAEMEEVSELQPIPDAHVPVMKFKFQGISIDLLYASISLLVVPEDIDISQMSVLNNVDEQTVRSLNGCRV 378 +V IFTFGSYRLG H GADIDALCV P +V R DFF + L + + L+ + DA VPV+KF+F GI IDL++A +++ + +++D+ S L ++D + +RSLNGCRV Sbjct: 88 VVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRV 205
BLAST of CF503889 vs. ExPASy Swiss-Prot
Match: PAPOG_HUMAN (Poly(A) polymerase gamma OS=Homo sapiens GN=PAPOLG PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 1.562e-24 Identity = 55/119 (46.22%), Postives = 78/119 (65.55%), Query Frame = 1 Query: 22 MVEDANAVIFTFGSYRLGAHGPGADIDALCVGPSYVSREEDFFIILHDILAEMEEVSELQPIPDAHVPVMKFKFQGISIDLLYASISLLVVPEDIDISQMSVLNNVDEQTVRSLNGCRV 378 +V IFTFGSYRLG H GADIDALCV P +V R DFF + L + + L+ + DA VPV+KF+F GI IDL++A +++ + +++D+ S L ++D + +RSLNGCRV Sbjct: 88 VVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERS-DFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLNGCRV 205
BLAST of CF503889 vs. ExPASy Swiss-Prot
Match: PAP_ENTHI (Poly(A) polymerase OS=Entamoeba histolytica GN=16.t00038 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.764e-13 Identity = 39/112 (34.82%), Postives = 64/112 (57.14%), Query Frame = 1 Query: 40 AVIFTFGSYRLGAHGPGADIDALCVGPSYVSREEDFFIILHDILAEMEEVSELQPIPDAHVPVMKFKFQGISIDLLYASISLLVVPEDIDISQMSVLNNVDEQTVRSLNGCR 375 A I+ +GSYRL +G +DIDA V S ++R+ DF+ L+ L +V EL+ IP P + + I DL ++ + +P+++DI ++L N+DE R++NG R Sbjct: 58 ATIYVYGSYRLNVYGNNSDIDACIVSNSTITRD-DFYDGLYAELLNNPDVKELKQIPSKRSPHLSMIYLNIEFDLNFSRTAYTSLPDNLDILNENILKNMDELDTRAINGVR 168 The following BLAST results are available for this feature:
BLAST of CF503889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503889 ID=CF503889; Name=CF503889; organism=Citrus sinensis; type=EST; length=408bpback to top |