CF503891
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503891 vs. ExPASy Swiss-Prot
Match: DBR1_CAEEL (Lariat debranching enzyme OS=Caenorhabditis elegans GN=dbr-1 PE=2 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 2.198e-43 Identity = 74/131 (56.49%), Postives = 102/131 (77.86%), Query Frame = 3 Query: 48 EKR*GLPVEGCMHGELDNVYKTLQYMENINNYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYN 440 EK+ + V GC HGE+D +Y+T+ +E N YK DLL+CCGD+QAVRN D+ +++P KYR +++F+KYYSG++ AP+ T+FIGGNHEAS YL EL GGW APNIY++GFA ++F N+RI GLSGI++ Sbjct: 38 EKKIRIAVVGCSHGEMDAIYETMTLIEQKNGYKFDLLICCGDYQAVRNYGDLPHMSIPPKYRSLQTFYKYYSGEQKAPVLTLFIGGNHEASGYLCELPNGGWVAPNIYYMGFANCIRFANLRIAGLSGIFS 168
BLAST of CF503891 vs. ExPASy Swiss-Prot
Match: DBR1_HUMAN (Lariat debranching enzyme OS=Homo sapiens GN=DBR1 PE=1 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 2.871e-43 Identity = 78/123 (63.41%), Postives = 97/123 (78.86%), Query Frame = 3 Query: 69 VEGCMHGELDNVYKTLQYMENINNYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIY 437 V GC HGELD +Y+TL E +DLLLCCGDFQAVRNE D+ + VP KYR M++F++YYSG++ AP+ T+FIGGNHEASN+L EL YGGW APNIY+LG AGVVK+ +RIGG+SGI+ Sbjct: 5 VAGCCHGELDKIYETLALAERRGPGPVDLLLCCGDFQAVRNEADLRCMAVPPKYRHMQTFYRYYSGEKKAPVLTLFIGGNHEASNHLQELPYGGWVAPNIYYLGLAGVVKYRGVRIGGISGIF 127
BLAST of CF503891 vs. ExPASy Swiss-Prot
Match: DBR1_CAEBR (Lariat debranching enzyme OS=Caenorhabditis briggsae GN=dbr-1 PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.575e-41 Identity = 71/131 (54.20%), Postives = 100/131 (76.34%), Query Frame = 3 Query: 48 EKR*GLPVEGCMHGELDNVYKTLQYMENINNYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYN 440 EK+ + V GC HGE+D +Y+T+ +E YK DLL+CCGD+QAVRN D+ +++P KYR +++F+KYYSG++ AP+ T+FIGGNHEAS +L EL GGW APNI+++GFA ++F +RI GLSGIY+ Sbjct: 42 EKKAKIAVVGCSHGEMDAIYETMALIEEKKGYKFDLLICCGDYQAVRNHGDLPHMSIPPKYRSLQTFYKYYSGEKKAPVLTLFIGGNHEASGFLCELPNGGWVAPNIFYMGFANCIQFAGLRIAGLSGIYS 172
BLAST of CF503891 vs. ExPASy Swiss-Prot
Match: DBR1_SCHPO (Lariat debranching enzyme OS=Schizosaccharomyces pombe GN=dbr1 PE=2 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 6.001e-33 Identity = 64/124 (51.61%), Postives = 88/124 (70.97%), Query Frame = 3 Query: 69 VEGCMHGELDNVYKTLQYMENINNYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYN 440 V+GC HG LDN+Y + K+DLL+ GDFQA+RN +D +++P K++ + F+ YY+G+ API TIF+GGNHEASNYL EL YGGW APNIY++G + V+ G +RI G+SGIY+ Sbjct: 20 VQGCCHGILDNLYILAE------KRKVDLLIIGGDFQALRNVSDYHGISMPPKFKRLGDFFNYYNGRNKAPILTIFVGGNHEASNYLDELPYGGWVAPNIYYMGRSSVINVGGLRIAGISGIYS 137
BLAST of CF503891 vs. ExPASy Swiss-Prot
Match: DBR1_YEAST (Lariat debranching enzyme OS=Saccharomyces cerevisiae GN=DBR1 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 2.209e-27 Identity = 55/125 (44.00%), Postives = 85/125 (68.00%), Query Frame = 3 Query: 63 LPVEGCMHGELDNVYKTLQYMENINNYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIY 437 + V+GC HG+L+ +YK + + IDLL+ GDFQ++R+ D +S+ +P KY+ + F YY+ + AP+PTIFIGGNHE+ +L L +GG+ A NI+++G++ V+ F IRIG LSGI+ Sbjct: 6 IAVQGCCHGQLNQIYKEVSRIHA--KTPIDLLIILGDFQSIRDGQDFKSIAIPPKYQRLGDFISYYNNEIEAPVPTIFIGGNHESMRHLMLLPHGGYVAKNIFYMGYSNVIWFKGIRIGSLSGIW 128 The following BLAST results are available for this feature:
BLAST of CF503891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503891 ID=CF503891; Name=CF503891; organism=Citrus sinensis; type=EST; length=441bpback to top |