CF503892

Overview
NameCF503892
Unique NameCF503892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSP6_DICDI (Cysteine proteinase 6 OS=Dictyostelium discoideum GN=cprF PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.711e-27
Identity = 66/161 (40.99%), Postives = 92/161 (57.14%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGE--LVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGV-SCPYICGKYLDHGVL 532
            K +      WSFSATGA EGA +++ G+  L S+SEQQL+DC        SGS  ++GC GGLM  AFEYI+  GG++ E  YP+T  +   CK++ S I A +S++  ++S  +   A  V  GP +V I+A     Q Y  G+ + P      LDHGVL
Sbjct:  128 KNQGECGGCWSFSATGATEGAQYIANGDSDLTSVSEQQLIDC--------SGSYGNNGCEGGLMTLAFEYIINNGGIDTESSYPFT-ANTEKCKYNPSNIGAELSSYVNVTSGSESDLAAKVTQGPTSVAIDASQPSFQFYSSGIYNEPACSSTQLDHGVL 279          

HSP 2 Score: 35.039 bits (79), Expect = 1.711e-27
Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 1
Query:   34 DWRDHGAVTGVKDQGACGSC 93
            DWR  GAVT +K+QG CG C
Sbjct:  117 DWRAKGAVTPIKNQGECGGC 136          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.716e-27
Identity = 59/157 (37.58%), Postives = 91/157 (57.96%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGV 529
            K +      W+FS   A+EG + + TG L +LSEQ+L+DCD         + ++GCNGGLM+ AFEYI+K GG+ +E+DYPY+  + G+C+  K +     ++    + +++++     + H PL+V I+A     Q Y GGV     CG  LDHGV
Sbjct:  154 KNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDT--------TYNNGCNGGLMDYAFEYIVKNGGLRKEEDYPYS-MEEGTCEMQKDESETVTINGHQDVPTNDEKSLLKALAHQPLSVAIDASGREFQFYSGGV-FDGRCGVDLDHGV 300          

HSP 2 Score: 38.5058 bits (88), Expect = 1.716e-27
Identity = 15/25 (60.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            +P   DWR  GAV  VK+QG+CGSC
Sbjct:  138 VPKSVDWRKKGAVAEVKNQGSCGSC 162          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.840e-27
Identity = 66/163 (40.49%), Postives = 97/163 (59.51%), Query Frame = 2
Query:   56 LLASKTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS--NFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVL 532
            +++ K + +    W+FSA GA+EG + ++TGEL+SLSEQ+LVDCD        G  ++GC+GG+MN AFE+I+K GG+E ++DYPY   D G C  DK+     V+   +  +  D+++     V H P++V I A     Q Y  GV     CG  LDHGV+
Sbjct:  142 VVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDR-------GFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNANDLGLCNADKNNNTRVVTIDGYEDVPRDDEKSLKKAVAHQPVSVAIEASSQAFQLYKSGVMTG-TCGISLDHGVV 296          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 2.898e-27
Identity = 61/151 (40.40%), Postives = 84/151 (55.63%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AGGVEREKDYPYTGTDGGSCKFDKSK---IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVL 532
            W+FSA G +EG  +L+  ELVSLSEQQLV CD           + GC+GGLM  AF+++L+   G +  E  YPY   +G   +   S    + A +    +I S E  MAA L K+GP+A+ ++A    +Y  GV    I GK L+HGVL
Sbjct:  151 WAFSAVGNIEGQWYLAGHELVSLSEQQLVSCD---------DMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECSNSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLTACI-GKQLNHGVL 291          

HSP 2 Score: 43.8986 bits (102), Expect = 2.898e-27
Identity = 18/25 (72.00%), Postives = 20/25 (80.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            +P   DWR+ GAVT VKDQGACGSC
Sbjct:  126 VPDAVDWREKGAVTPVKDQGACGSC 150          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.772e-27
Identity = 61/152 (40.13%), Postives = 85/152 (55.92%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AGGVEREKDYPYTGTDG----GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVL 532
            W+FSA G +EG  +L+  ELVSLSEQQLV CD           + GC+GGLM  AF+++L+   G +  E  YPY   +G     S   ++  + A +    +I S E  MAA L K+GP+A+ ++A    +Y  GV    I GK L+HGVL
Sbjct:  151 WAFSAVGNIEGQWYLAGHELVSLSEQQLVSCD---------DMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECSNSSEELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLTACI-GKQLNHGVL 292          

HSP 2 Score: 43.8986 bits (102), Expect = 3.772e-27
Identity = 18/25 (72.00%), Postives = 20/25 (80.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            +P   DWR+ GAVT VKDQGACGSC
Sbjct:  126 VPDAVDWREKGAVTPVKDQGACGSC 150          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 6.389e-27
Identity = 56/147 (38.10%), Postives = 82/147 (55.78%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGV 529
            W+FSA  A+EG + + TG+L+SLSEQ+LVDCD         S + GCNGGLM+ AF++I+  GG++ E DYPY G D       K+     + ++  ++ + +      V + P++V I A     Q Y  G+     CG  LDHGV
Sbjct:  154 WAFSAIAAVEGINQIVTGDLISLSEQELVDCDT--------SYNEGCNGGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQPVSVAIEAGGRAFQLYSSGIFTGK-CGTALDHGV 291          

HSP 2 Score: 40.817 bits (94), Expect = 6.389e-27
Identity = 16/25 (64.00%), Postives = 17/25 (68.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            LP   DWR  GAV  +KDQG CGSC
Sbjct:  129 LPESVDWRTKGAVAEIKDQGGCGSC 153          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.088e-26
Identity = 62/149 (41.61%), Postives = 83/149 (55.70%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVWMQ--TYIGGVSCPYICGKYLDHGVL 532
            W+FSA GALEG   L TG+L+SLS Q LVDC +E   E+ G+   GC GG M  AF+YI+  GG+E +  YPY  TD   C ++    AA  S +  +   DED +   +   GP++VGI+A       Y  GV     C   ++HGVL
Sbjct:  148 WAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNE---EKYGN--KGCGGGYMTEAFQYIIDNGGIEADASYPYKATD-EKCHYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTGNVNHGVL 290          

HSP 2 Score: 38.1206 bits (87), Expect = 1.088e-26
Identity = 15/25 (60.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            LP   DWR+ G VT VK QG+CG+C
Sbjct:  123 LPDTVDWREKGCVTEVKYQGSCGAC 147          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.844e-26
Identity = 62/158 (39.24%), Postives = 84/158 (53.16%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA---VWMQTYIGGVSCPYICGKYLDHGVL 532
            K +      W+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGGLM+ AF+Y+   GG++ E+ YPY  T+  SCK++     A  + F  I   E  +   +   GP++V I+A    +M    G    P    + +DHGVL
Sbjct:  130 KNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDC-------SGPQGNEGCNGGLMDYAFQYVADNGGLDSEESYPYEATE-ESCKYNPEYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMDHGVL 279          

HSP 2 Score: 38.5058 bits (88), Expect = 1.844e-26
Identity = 15/26 (57.69%), Postives = 18/26 (69.23%), Query Frame = 1
Query:   16 DLPTDFDWRDHGAVTGVKDQGACGSC 93
            + P   DWR+ G VT VK+QG CGSC
Sbjct:  113 EAPRSVDWREKGYVTPVKNQGQCGSC 138          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 1.844e-26
Identity = 58/149 (38.93%), Postives = 79/149 (53.02%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVWMQ--TYIGGVSCPYICGKYLDHGVL 532
            W+FSA GALE    L TG+LVSLS Q LVDC        +   + GCNGG M  AF+YI+   G++ E  YPY   D G C++D    AA  S +  +    E+ +   +   GP++VGI+A       Y  GV     C + ++HGVL
Sbjct:  140 WAFSAVGALEAQVKLKTGKLVSLSAQNLVDCS------TAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMD-GKCQYDVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQNVNHGVL 281          

HSP 2 Score: 43.5134 bits (101), Expect = 1.844e-26
Identity = 18/29 (62.07%), Postives = 19/29 (65.52%), Query Frame = 1
Query:    7 PTNDLPTDFDWRDHGAVTGVKDQGACGSC 93
            P   LP   DWR+ G VT VK QGACGSC
Sbjct:  111 PNQKLPDSMDWREKGCVTEVKYQGACGSC 139          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.858e-26
Identity = 66/158 (41.77%), Postives = 85/158 (53.80%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSC-PYICGKYLDHGVL 532
            K +      W+FSATGALEG  F  TG+LVSLSEQ LVD             + GCNGGLM++AF+YI + GG++ E+ YPY  TD  SC +     AA  + F  I   E  +   +   GP++V I+A     Q Y  G+   P    K LDHGVL
Sbjct:   17 KNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDSSRP-------QGNQGCNGGLMDNAFQYIKENGGLDSEESYPYEATD-TSCNYKPEYSAAKDTGFVDIPQREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVL 166          

HSP 2 Score: 35.039 bits (79), Expect = 1.858e-26
Identity = 14/25 (56.00%), Postives = 16/25 (64.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            +P   DW   G VT VK+QG CGSC
Sbjct:    1 VPKSVDWTKKGYVTPVKNQGQCGSC 25          
The following BLAST results are available for this feature:
BLAST of CF503892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CYSP6_DICDI1.711e-2740.99Cysteine proteinase 6 OS=Dictyostelium discoideum ... [more]
XCP2_ARATH1.716e-2737.58Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
CPR1_ARATH2.840e-2740.49Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
LMCPB_LEIME2.898e-2740.40Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]
CYSP2_LEIPI3.772e-2740.13Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]
ORYA_ORYSJ6.389e-2738.10Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
CATS_MOUSE1.088e-2641.61Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
CATL1_CERAE1.844e-2639.24Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CATS_BOVIN1.844e-2638.93Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATL1_SHEEP1.858e-2641.77Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-379 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503892 ID=CF503892; Name=CF503892; organism=Citrus sinensis; type=EST; length=532bp
ATTCTCCCCACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACGG
CGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCCTGGTCG
TTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGA
GCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTG
ATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATG
AACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAGAA
GGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAAAA
GCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATGAA
GATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGTAT
CAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCATACA
TTTGCGGGAAGTATTTGGATCATGGAGTGCTT
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