CF503892

Overview
NameCF503892
Unique NameCF503892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.400e-26
Identity = 60/149 (40.27%), Postives = 83/149 (55.70%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVWMQ--TYIGGVSCPYICGKYLDHGVL 532
            W+FSA GALE    L TG+LVSLS Q LVDC      E+ G+   GCNGG M +AF+YI+   G++ E  YPY   + G C++D  K AA  S ++ +    ED +   +   GP++V I+A       Y  GV     C + ++HGVL
Sbjct:  140 WAFSAVGALEAQLKLKTGKLVSLSAQNLVDCS----TEKYGN--KGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMN-GKCRYDSKKRAATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCTQNVNHGVL 281          

HSP 2 Score: 38.5058 bits (88), Expect = 2.400e-26
Identity = 15/25 (60.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            LP   DWR+ G VT VK QG+CG+C
Sbjct:  115 LPDSVDWREKGCVTEVKYQGSCGAC 139          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 3.134e-26
Identity = 59/158 (37.34%), Postives = 84/158 (53.16%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAV--GINAVWMQTYIGGVSCPYICG-KYLDHGVL 532
            K +      W+FSATGALEG  F  TG+L+SL+EQ LVDC            + GCNGG M++ F Y+ + GG++ E  YPY G    +C+++    AA  + F  I S E  +A  +   GP++V  G + V  Q Y  G+     C  + LDH +L
Sbjct:   73 KDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDC-------SGPQGNEGCNGGFMDNPFRYVQENGGLDSEASYPYEG-KVKTCRYNPKYSAANDTGFVDIPSQEKDLAKAVATVGPISVAAGASHVSFQFYKKGIYFEPRCDPEGLDHAML 222          

HSP 2 Score: 42.743 bits (99), Expect = 3.134e-26
Identity = 16/26 (61.54%), Postives = 20/26 (76.92%), Query Frame = 1
Query:   16 DLPTDFDWRDHGAVTGVKDQGACGSC 93
            ++PT  DWR+ G +T VKDQG CGSC
Sbjct:   56 EIPTSVDWREKGYMTPVKDQGQCGSC 81          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 4.066e-26
Identity = 62/159 (38.99%), Postives = 85/159 (53.46%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINA--VWMQTYIGGVSC-PYICGKYLDHGVL 532
            K +      W+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGG M  AF+Y+ + GG++ E+ YPY   D   CK+      A  + F+V++  +++     V   GP++V ++A     Q Y  G+   P    K LDHGVL
Sbjct:  130 KNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRP-------QGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVD-EICKYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVL 280          

HSP 2 Score: 37.7354 bits (86), Expect = 4.066e-26
Identity = 16/26 (61.54%), Postives = 17/26 (65.38%), Query Frame = 1
Query:   16 DLPTDFDWRDHGAVTGVKDQGACGSC 93
            DLP   DWR  G VT VK+Q  CGSC
Sbjct:  113 DLPKSVDWRKKGYVTPVKNQKQCGSC 138          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 4.101e-26
Identity = 72/161 (44.72%), Postives = 93/161 (57.76%), Query Frame = 2
Query:   62 ASKTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGV-SCPYICGKYLDHGVL 532
            A K + H    W+FS+TGALEG HF  +G LVSLSEQ LVDC  +         ++GCNGGLM++AF YI   GG++ EK YPY   D  SC F+K  + A    F+ I   DE +MA  +   GP++V I+A     Q Y  GV + P    + LDHGVL
Sbjct:  168 AVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYG-------NNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAID-DSCHFNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVL 320          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.294e-26
Identity = 60/149 (40.27%), Postives = 81/149 (54.36%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVWMQ--TYIGGVSCPYICGKYLDHGVL 532
            W+FSA GALE    L TG+LVSLS Q LVDC      E+ G+   GCNGG M  AF+YI+   G++ E  YPY  TD   C++D    AA  S ++ +    ED +   +   GP+ VG++A       Y  GV     C + ++HGVL
Sbjct:  140 WAFSAVGALEAQLKLKTGKLVSLSAQNLVDCS-----EKYGN--KGCNGGFMTEAFQYIIDNKGIDSEASYPYKATD-QKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPACTQKVNHGVL 280          

HSP 2 Score: 40.0466 bits (92), Expect = 5.294e-26
Identity = 16/29 (55.17%), Postives = 19/29 (65.52%), Query Frame = 1
Query:    7 PTNDLPTDFDWRDHGAVTGVKDQGACGSC 93
            P   LP   DWR+ G VT VK QG+CG+C
Sbjct:  111 PNQMLPDSVDWREKGCVTEVKYQGSCGAC 139          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: LMCPA_LEIME (Cysteine proteinase A OS=Leishmania mexicana GN=LMCPA PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 6.882e-26
Identity = 60/151 (39.74%), Postives = 84/151 (55.63%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKDYPYTGTDGGSCK---FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVL 532
            W+FSA G +EG    S   LVSLSEQ LV CD         + D GCNGGLM+ A  +I+++  G V  E  YPY  T GG  +    D+ ++ A ++ F  +  DE+++A  + K GP+AV ++A   Q Y GGV    +    L+HGVL
Sbjct:  154 WAFSAIGNIEGQWAASGHSLVSLSEQMLVSCD---------NIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPY--TSGGGTRPPCHDEGEVGAKITGFLSLPHDEERIAEWVEKRGPVAVAVDATTWQLYFGGVVSLCLAWS-LNHGVL 292          

HSP 2 Score: 40.0466 bits (92), Expect = 6.882e-26
Identity = 16/20 (80.00%), Postives = 17/20 (85.00%), Query Frame = 1
Query:   34 DWRDHGAVTGVKDQGACGSC 93
            DWRD GAVT VK+QG CGSC
Sbjct:  134 DWRDKGAVTPVKNQGLCGSC 153          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSP1_LEIPI (Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS1 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 6.882e-26
Identity = 60/151 (39.74%), Postives = 84/151 (55.63%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKDYPYTGTDGGSCK---FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVL 532
            W+FSA G +EG    S   LVSLSEQ LV CD         + D GCNGGLM+ A  +I+++  G V  E  YPY  T GG  +    D+ ++ A ++ F  +  DE+++A  + K GP+AV ++A   Q Y GGV    +    L+HGVL
Sbjct:  154 WAFSAIGNIEGQWAASGHSLVSLSEQMLVSCD---------NIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPY--TSGGGTRPPCHDEGEVGAKITGFLSLPHDEERIAEWVEKRGPVAVAVDATTWQLYFGGVVSLCLAWS-LNHGVL 292          

HSP 2 Score: 40.0466 bits (92), Expect = 6.882e-26
Identity = 16/20 (80.00%), Postives = 17/20 (85.00%), Query Frame = 1
Query:   34 DWRDHGAVTGVKDQGACGSC 93
            DWRD GAVT VK+QG CGSC
Sbjct:  134 DWRDKGAVTPVKNQGLCGSC 153          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 6.889e-26
Identity = 61/158 (38.61%), Postives = 83/158 (52.53%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSC-PYICGKYLDHGVL 532
            K +      W+FSATGALEG  F  TG L+SLSEQ LVDC            + GCNGGLM+ AF+Y+   GG++ E+ YPY  T+  SCK++     A  + F  I   E  +   +   GP++V I+A       Y  G+   P    + +DHGVL
Sbjct:  130 KNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDC-------SGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATE-ESCKYNPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVL 279          

HSP 2 Score: 38.5058 bits (88), Expect = 6.889e-26
Identity = 15/26 (57.69%), Postives = 18/26 (69.23%), Query Frame = 1
Query:   16 DLPTDFDWRDHGAVTGVKDQGACGSC 93
            + P   DWR+ G VT VK+QG CGSC
Sbjct:  113 EAPRSVDWREKGYVTPVKNQGQCGSC 138          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.974e-25
Identity = 56/156 (35.90%), Postives = 83/156 (53.21%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGV 529
            K +      W+FS   A+EG + + T +LVSLSEQ+LVDCD E +         GCNGGLM SAFE+I + GG+  E +YPYT  +G   +   + +A ++     +  +++      V + P++V I+A     Q Y  GV     C   L+HGV
Sbjct:  144 KDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDKEEN--------QGCNGGLMESAFEFIKQKGGITTESNYPYTAQEGTCDESKVNDLAVSIDGHENVPVNDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTG-DCNTDLNHGV 290          

HSP 2 Score: 42.3578 bits (98), Expect = 1.974e-25
Identity = 17/25 (68.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            +P   DWR  GAVT VKDQG CGSC
Sbjct:  128 VPASVDWRKKGAVTDVKDQGQCGSC 152          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.974e-25
Identity = 58/157 (36.94%), Postives = 83/157 (52.87%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGV 529
            K +      W+FS   A+EG + + T +LVSLSEQ+LVDCD + +         GCNGGLM+ AFE+I + GG+  E +YPY   D G+C   K    A ++     +  +++      V + P++V I+A     Q Y  GV     CG  LDHGV
Sbjct:  142 KDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQN--------QGCNGGLMDYAFEFIKQRGGITTEANYPYEAYD-GTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTG-SCGTELDHGV 288          

HSP 2 Score: 42.743 bits (99), Expect = 1.974e-25
Identity = 17/25 (68.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            +P   DWR  GAVT VKDQG CGSC
Sbjct:  126 VPASVDWRKKGAVTSVKDQGQCGSC 150          
The following BLAST results are available for this feature:
BLAST of CF503892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CATS_CANFA2.400e-2640.27Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CATL6_HUMAN3.134e-2637.34Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CATL2_HUMAN4.066e-2638.99Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]
CATL_DROME4.101e-2644.72Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
CATS_SAIBB5.294e-2640.27Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
LMCPA_LEIME6.882e-2639.74Cysteine proteinase A OS=Leishmania mexicana GN=LM... [more]
CYSP1_LEIPI6.882e-2639.74Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS... [more]
CATL1_HUMAN6.889e-2638.61Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]
CYSEP_VIGMU1.974e-2535.90Vignain OS=Vigna mungo PE=1 SV=1[more]
CYSEP_RICCO1.974e-2536.94Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-379 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503892 ID=CF503892; Name=CF503892; organism=Citrus sinensis; type=EST; length=532bp
ATTCTCCCCACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACGG
CGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCCTGGTCG
TTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGA
GCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTG
ATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATG
AACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAGAA
GGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAAAA
GCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATGAA
GATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGTAT
CAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCATACA
TTTGCGGGAAGTATTTGGATCATGGAGTGCTT
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