CF503892

Overview
NameCF503892
Unique NameCF503892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.570e-25
Identity = 66/163 (40.49%), Postives = 91/163 (55.83%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS---NFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKY---LDHGVL 532
            K + H    W+FS TGALE A+  + G+ +SLSEQQLVDC        +G+ ++ GC+GGL + AFEYI   GG++ E+ YPYTG DGG CKF    I   V    N ++ + DE + A  LV+  P++V    V   + Y  GV     CG     ++H VL
Sbjct:  157 KEQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDC--------AGTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGG-CKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVR--PVSVAFEVVHEFRFYKKGVFTSNTCGNTPMDVNHAVL 308          

HSP 2 Score: 36.1946 bits (82), Expect = 2.570e-25
Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            +P   DWR+ G V+ VK+QG CGSC
Sbjct:  141 VPDTKDWREDGIVSPVKEQGHCGSC 165          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.572e-25
Identity = 57/148 (38.51%), Postives = 86/148 (58.11%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICG-KYLDHGVL 532
            W+F+A G +E  + +    L+ LSEQQL+DCD           D GC+GGLM+ AF+ I++ GGVE E DYPY G +  +C+   SK+A  +S+ +     DE ++   L K+GP+AV I+ V +  Y  G++   +C    L+H VL
Sbjct:  151 WAFAAIGNIESQYAIMHDSLIDLSEQQLLDCDR---------VDQGCDGGLMHLAFQEIIRIGGVEHEIDYPYQGIE-YACRLAPSKLAVRLSHCYQYDLRDERKLLELLYKNGPIAVAIDCVDIIDYRSGIAT--VCNDNGLNHAVL 286          

HSP 2 Score: 38.891 bits (89), Expect = 2.572e-25
Identity = 16/29 (55.17%), Postives = 18/29 (62.07%), Query Frame = 1
Query:    7 PTNDLPTDFDWRDHGAVTGVKDQGACGSC 93
            P+   P  FDWR    VT VK+QG CGSC
Sbjct:  122 PSARTPESFDWRKLNKVTKVKEQGVCGSC 150          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 5.673e-25
Identity = 58/149 (38.93%), Postives = 82/149 (55.03%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVWMQ--TYIGGVSCPYICGKYLDHGVL 532
            W+FSA GALE    L TG+LVSLS Q LVD    C  E+ G  + GCNGG M +AF+YI+   G++ +  YPY   D   C++D    AA  S ++ +    ED +   +   GP++VG++A       Y  GV     C + ++HGVL
Sbjct:  140 WAFSAVGALEAQLKLKTGKLVSLSAQNLVD----CSTEKYG--NKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMD-QKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVL 281          

HSP 2 Score: 40.0466 bits (92), Expect = 5.673e-25
Identity = 16/29 (55.17%), Postives = 19/29 (65.52%), Query Frame = 1
Query:    7 PTNDLPTDFDWRDHGAVTGVKDQGACGSC 93
            P   LP   DWR+ G VT VK QG+CG+C
Sbjct:  111 PNRILPDSVDWREKGCVTEVKYQGSCGAC 139          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.368e-25
Identity = 54/159 (33.96%), Postives = 79/159 (49.69%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPY---TGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGV 529
            K +      W+FS   ++EG + + TG LVSLSEQ+L+DCD         + + GC GGLM++AFEYI   GG+  E  YPY    GT   +     S +   +     + ++ ++  A  V + P++V + A       Y  GV     CG  LDHGV
Sbjct:  150 KDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCD--------TADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGE-CGTELDHGV 299          

HSP 2 Score: 49.6766 bits (117), Expect = 7.368e-25
Identity = 21/30 (70.00%), Postives = 22/30 (73.33%), Query Frame = 1
Query:    4 LPTNDLPTDFDWRDHGAVTGVKDQGACGSC 93
            L  +DLP   DWR  GAVTGVKDQG CGSC
Sbjct:  129 LNVSDLPPSVDWRQKGAVTGVKDQGKCGSC 158          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 9.590e-25
Identity = 54/159 (33.96%), Postives = 79/159 (49.69%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPY---TGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGV 529
            K +      W+FS   ++EG + + TG LVSLSEQ+L+DCD         + + GC GGLM++AFEYI   GG+  E  YPY    GT   +     S +   +     + ++ ++  A  V + P++V + A       Y  GV     CG  LDHGV
Sbjct:  150 KDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCD--------TADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTG-DCGTELDHGV 299          

HSP 2 Score: 49.6766 bits (117), Expect = 9.590e-25
Identity = 21/30 (70.00%), Postives = 22/30 (73.33%), Query Frame = 1
Query:    4 LPTNDLPTDFDWRDHGAVTGVKDQGACGSC 93
            L  +DLP   DWR  GAVTGVKDQG CGSC
Sbjct:  129 LNVSDLPPSVDWRQKGAVTGVKDQGKCGSC 158          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.248e-24
Identity = 56/148 (37.84%), Postives = 83/148 (56.08%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVL 532
            W+F A G +E  + +   +L+ LSEQQL+DCD           D GCNGGLM+ AF+ +L  GGVE E DYPY G++   C  D  KIA  +++ F     DE+++   +   GP+A+ ++A+ +  Y  G+     C  Y L+H VL
Sbjct:  181 WAFVAIGNIESQYAIRHNKLIDLSEQQLLDCDE---------VDLGCNGGLMHLAFQELLLMGGVETEADYPYQGSE-QMCTLDNRKIAVKLNSCFKYDIRDENKLKELVYTTGPVAIAVDAMDIINYRRGILNQ--CHIYDLNHAVL 316          

HSP 2 Score: 41.5874 bits (96), Expect = 1.248e-24
Identity = 17/29 (58.62%), Postives = 19/29 (65.52%), Query Frame = 1
Query:    7 PTNDLPTDFDWRDHGAVTGVKDQGACGSC 93
            P   LP  +DWRD   VT +KDQG CGSC
Sbjct:  152 PDIRLPDYYDWRDTNKVTPIKDQGVCGSC 180          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.249e-24
Identity = 62/162 (38.27%), Postives = 87/162 (53.70%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSCPYICGKY---LDHGVL 532
            K + H    W+FS TGALE A+  +TG+ +SLSEQQLVDC    +       + GCNGGL + AFEYI   GG++ E+ YPY G + G CKF    +   V    N ++ + DE + A  LV+  P++V    +   + Y  GV     CG     ++H VL
Sbjct:  159 KNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAFN-------NFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVN-GICKFKNENVGVKVLDSVNITLGAEDELKDAVGLVR--PVSVAFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVL 310          

HSP 2 Score: 36.965 bits (84), Expect = 1.249e-24
Identity = 15/25 (60.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            LP   DWR+ G V+ VK+QG CGSC
Sbjct:  143 LPETKDWREDGIVSPVKNQGHCGSC 167          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.249e-24
Identity = 61/154 (39.61%), Postives = 87/154 (56.49%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKY---LDHGVL 532
            W+FS TGALE A+  + G+ +SLSEQQLVDC        +G+ ++ GCNGGL + AFEYI   GG++ EK YPYTG D  +CKF    +   V    N ++ + DE + A  LV+  P+++    +   + Y  GV     CG     ++H VL
Sbjct:  166 WTFSTTGALEAAYHQAFGKGISLSEQQLVDC--------AGAFNNYGCNGGLPSQAFEYIKSNGGLDTEKAYPYTGKD-ETCKFSAENVGVQVLNSVNITLGAEDELKHAVGLVR--PVSIAFEVIHSFRLYKSGVYTDSHCGSTPMDVNHAVL 308          

HSP 2 Score: 39.6614 bits (91), Expect = 1.249e-24
Identity = 16/25 (64.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            LP   DWR+ G V+ VKDQG CGSC
Sbjct:  141 LPETKDWREDGIVSPVKDQGGCGSC 165          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.625e-24
Identity = 54/156 (34.62%), Postives = 82/156 (52.56%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGV 529
            K +      W+FS   A+EG + + T +LV+LSEQ+LVDCD E +         GCNGGLM SAFE+I + GG+  E +YPY   +G       + +A ++     + ++++      V + P++V I+A     Q Y  GV     C   L+HGV
Sbjct:  144 KDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVDCDKEEN--------QGCNGGLMESAFEFIKQKGGITTESNYPYKAQEGTCDASKVNDLAVSIDGHENVPANDEDALLKAVANQPVSVAIDAGGSDFQFYSEGVFTG-DCSTDLNHGV 290          

HSP 2 Score: 41.9726 bits (97), Expect = 1.625e-24
Identity = 17/25 (68.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            +P   DWR  GAVT VKDQG CGSC
Sbjct:  128 VPPSVDWRKKGAVTDVKDQGQCGSC 152          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.625e-24
Identity = 57/156 (36.54%), Postives = 78/156 (50.00%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGV 529
            K +      W+FS   ++EG + + TGELVSLSEQ+LVDCD         S + GCNGGLM+ AFE+I K  G+  E  YPY   DG       +    ++     + ++ +      V + P++V I A     Q Y  GV     CG  LDHGV
Sbjct:  146 KDQGQCGSCWAFSTIASVEGINQIKTGELVSLSEQELVDCD--------TSYNEGCNGGLMDYAFEFIQK-NGITTEDSYPYAEQDGTCASNLLNSPVVSIDGHQDVPANNENALMQAVANQPISVSIEASGYGFQFYSEGVFTGR-CGTELDHGV 291          

HSP 2 Score: 41.9726 bits (97), Expect = 1.625e-24
Identity = 17/20 (85.00%), Postives = 17/20 (85.00%), Query Frame = 1
Query:   34 DWRDHGAVTGVKDQGACGSC 93
            DWR  GAVTGVKDQG CGSC
Sbjct:  135 DWRAKGAVTGVKDQGQCGSC 154          
The following BLAST results are available for this feature:
BLAST of CF503892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
ALEUL_ARATH2.570e-2540.49Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
CATV_NPVST2.572e-2538.51Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
CATS_HUMAN5.673e-2538.93Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
CYSP2_HORVU7.368e-2533.96Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CYSP1_HORVU9.590e-2533.96Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
CATV_NPVHZ1.248e-2437.84Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CYSP2_MAIZE1.249e-2438.27Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
ALEU_ARATH1.249e-2439.61Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
CYSEP_PHAVU1.625e-2434.62Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CYSP_HEMSP1.625e-2436.54Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-379 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503892 ID=CF503892; Name=CF503892; organism=Citrus sinensis; type=EST; length=532bp
ATTCTCCCCACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACGG
CGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCCTGGTCG
TTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGA
GCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTG
ATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATG
AACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAGAA
GGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAAAA
GCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATGAA
GATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGTAT
CAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCATACA
TTTGCGGGAAGTATTTGGATCATGGAGTGCTT
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