CF503892

Overview
NameCF503892
Unique NameCF503892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.429e-22
Identity = 52/159 (32.70%), Postives = 83/159 (52.20%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSK--IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPYICGKYLDHGVL 532
            K +      W+F+   ++E    +    L+ LSEQQL+DCD         S D GCNGGL+++AFE I++ GGV+ E DYP+ G +   C  D+ +  + + V  +  +  +E+++   L   GP+ + I+A  +  Y  GV  SC       L+H VL
Sbjct:  160 KNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCD---------SVDMGCNGGLLHTAFEEIMRMGGVQTELDYPFVGRN-RRCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIPMAIDAADIVNYYRGVISSCE---NNGLNHAVL 305          

HSP 2 Score: 40.817 bits (94), Expect = 1.429e-22
Identity = 15/29 (51.72%), Postives = 20/29 (68.97%), Query Frame = 1
Query:    7 PTNDLPTDFDWRDHGAVTGVKDQGACGSC 93
            P +  P  FDWR+   VT +K+QGACG+C
Sbjct:  140 PPDKGPLHFDWREQNKVTSIKNQGACGAC 168          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.418e-22
Identity = 50/151 (33.11%), Postives = 81/151 (53.64%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG---GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL--AVGINAVWMQTYIGGVSCPYICGKYLDHGVL 532
            W+FS  GA+EG + + TGELV+LSEQ L++C+ E         ++GC GG + +A+E+I+  GG+  + DYPY   +G   G  K D   +   +  +  + ++++      V H P+   V  ++   Q Y  GV     CG  L+HGV+
Sbjct:  169 WAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE---------NNGCGGGKVETAYEFIMNNGGLGTDNDYPYKALNGVCEGRLKEDNKNV--MIDGYENLPANDEAALMKAVAHQPVTAVVDSSSREFQLYESGV-FDGTCGTNLNHGVV 307          

HSP 2 Score: 40.817 bits (94), Expect = 2.418e-22
Identity = 17/25 (68.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            LP   DWR+ GAVT VKDQG C SC
Sbjct:  144 LPKSVDWRNEGAVTEVKDQGLCRSC 168          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.421e-22
Identity = 50/148 (33.78%), Postives = 77/148 (52.03%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV--WMQTYIGGVSCPYICGKYLDHGVL 532
            W+F  TGA+EG  F  TG+L+ LS Q L+DC            + GC  G   +AF+Y+L  GG+E E  YPY   + G C+++    +A ++ F V+   ED +   +   GP+A G++ +    + Y  GV     C  Y++H VL
Sbjct:  150 WAFPVTGAIEGQMFKKTGKLIPLSVQNLIDC-------SKPQGNRGCLWGNTYNAFQYVLHNGGLEAEATYPYERKE-GVCRYNPKNSSAKITGFVVLPESEDVLMDAVATKGPIATGVHVISSSFRFYQKGVYHEPKCSSYVNHAVL 289          

HSP 2 Score: 34.6538 bits (78), Expect = 2.421e-22
Identity = 14/25 (56.00%), Postives = 16/25 (64.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            LP   DWR+ G VT V+ QG C SC
Sbjct:  125 LPKFVDWRNEGYVTRVRKQGGCSSC 149          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.424e-22
Identity = 51/156 (32.69%), Postives = 81/156 (51.92%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVL 532
            K +      W+F+  G+LE    +   +L++LSEQQL+DCD           D GC+GGL+++A+E ++  GG++ E DYPY   + G C+ + +K    V   +  +   E+++   L   GPL V I+A  +  Y  GV   Y     L+H VL
Sbjct:  129 KNQGTCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDF---------VDMGCDGGLLHTAYEAVMNMGGIQAENDYPYE-ANNGDCRLNAAKFVVKVKKCYRYVLMFEEKLKDLLRIVGPLPVAIDASDIVNYKRGV-IRYCANHGLNHAVL 273          

HSP 2 Score: 38.1206 bits (87), Expect = 2.424e-22
Identity = 15/29 (51.72%), Postives = 19/29 (65.52%), Query Frame = 1
Query:    7 PTNDLPTDFDWRDHGAVTGVKDQGACGSC 93
            P +  P +FDWR    VT VK+QG CG+C
Sbjct:  109 PPDKGPLEFDWRRLNKVTSVKNQGTCGAC 137          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.152e-22
Identity = 57/158 (36.08%), Postives = 84/158 (53.16%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGK-YLDHGVL 532
            K + +   +W+FSATG+LEG  F  TG LV LSEQ L+DC          +    C+GG M +AF+Y+   GG+  E+ YPY G  G  C++     AA V +F  I   E+ +   + K GP++V ++A     Q Y  G+     C + +L+H VL
Sbjct:  130 KNQGYCASSWAFSATGSLEGQMFKKTGRLVPLSEQNLLDC-------MGSNVTHDCSGGFMQNAFQYVKDNGGLATEESYPYIG-PGRKCRYHAENSAANVRDFVQIPGREEALMKAVAKVGPISVAVDASHDSFQFYDSGIYYEPQCKRVHLNHAVL 279          

HSP 2 Score: 28.4906 bits (62), Expect = 3.152e-22
Identity = 13/24 (54.17%), Postives = 15/24 (62.50%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGS 90
            +P   DWR  G VT VK+QG C S
Sbjct:  114 VPKYVDWRMLGYVTPVKNQGYCAS 137          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.096e-22
Identity = 59/161 (36.65%), Postives = 88/161 (54.66%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAA-AVSNFSVISSDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSCPYICGKY---LDHGVL 532
            K +      W+FS TGALE A+  + G+ +SLSEQQLVDC        +G+ ++ GCNGGL + AFEYI   GG++ E+ YPYTG + G CKF ++ I    +S+ ++    E ++   +    P++V    V   + Y  GV     CG     ++H VL
Sbjct:  155 KAQGKCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDC--------AGAFNNFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTGKN-GICKFSQANIGVKVISSVNITLGAEYELKYAVALVRPVSVAFEVVKGFKQYKSGVYASTECGDTPMDVNHAVL 306          

HSP 2 Score: 35.039 bits (79), Expect = 4.096e-22
Identity = 15/25 (60.00%), Postives = 16/25 (64.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            LP   DWR  G V+ VK QG CGSC
Sbjct:  139 LPETKDWRKDGIVSPVKAQGKCGSC 163          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 5.335e-22
Identity = 62/161 (38.51%), Postives = 83/161 (51.55%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPL--AVGINAVWMQTYIGGVSCPYICGKYLD---HGVL 532
            K +      W+FS TGALE A  ++TG+L  L+EQQLVDC    +       + GC GGL + AFEYI    G+  E  YPY G D G CK+  SK  A V + + I+ +DE+ M   +  H P+  A  + A +M  Y  G+     C K  D   H VL
Sbjct:  133 KNQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDCAQNFN-------NHGCQGGLPSQAFEYIRYNKGIMGEDTYPYRGQD-GDCKYQPSKAIAFVKDVANITLNDEEAMVEAVALHNPVSFAFEVTADFMM-YRKGIYSSTSCHKTPDKVNHAVL 284          

HSP 2 Score: 34.6538 bits (78), Expect = 5.335e-22
Identity = 16/29 (55.17%), Postives = 18/29 (62.07%), Query Frame = 1
Query:   10 TNDLPTDFDWRDHGA-VTGVKDQGACGSC 93
            T   P   DWR  G  VT VK+QG+CGSC
Sbjct:  113 TGPYPPSMDWRKKGNFVTPVKNQGSCGSC 141          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 6.946e-22
Identity = 52/156 (33.33%), Postives = 81/156 (51.92%), Query Frame = 2
Query:   68 KTRAHVDRAWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFS-VISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVL 532
            K +      W+F+   +LE    ++   L++LSEQQ++DCD         S D GC GGL+++AFE I+  GGV+ E DYPY  ++   C+ D +K    V   +  I+  E+++   L   GP+ V I+A  +  Y  G+   Y     L+H VL
Sbjct:  128 KNQGMCGACWAFATLASLESQFAIAHDRLINLSEQQMIDCD---------SVDVGCEGGLLHTAFEAIISMGGVQIENDYPYESSN-NYCRMDPTKFVVGVKQCNRYITIYEEKLKDVLRLAGPIPVAIDASDILNYEQGI-IKYCANNGLNHAVL 272          

HSP 2 Score: 37.7354 bits (86), Expect = 6.946e-22
Identity = 14/29 (48.28%), Postives = 18/29 (62.07%), Query Frame = 1
Query:    7 PTNDLPTDFDWRDHGAVTGVKDQGACGSC 93
            P    P +FDWR    +T VK+QG CG+C
Sbjct:  108 PPGKGPLEFDWRRFNKITSVKNQGMCGAC 136          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 8.954e-22
Identity = 55/147 (37.41%), Postives = 81/147 (55.10%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS---NFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLD 520
            W+F +TG+LEG + ++ GELVSLSEQQLVDC        +GS   GC GG  +SAF+Y+++ G +  E +YPY     G C+ D++   + VS     +V S  E  +   +   GP+A+ I+A     + Y+ GV     C   LD
Sbjct:  334 WTFGSTGSLEGTNCVTNGELVSLSEQQLVDC-----AILTGS--QGCGGGFASSAFQYVMEIGSLATESNYPYL-MQNGLCR-DRTVTPSGVSITGYVNVTSGSESALQNAIATTGPVAIAIDASVDDFRYYMSGVYNNPACKNGLD 471          

HSP 2 Score: 39.6614 bits (91), Expect = 8.954e-22
Identity = 15/25 (60.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            +P+  DWR+   VT VKDQG CGSC
Sbjct:  309 IPSTVDWRNQNCVTPVKDQGICGSC 333          
BLAST of CF503892 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.527e-21
Identity = 50/147 (34.01%), Postives = 81/147 (55.10%), Query Frame = 2
Query:   95 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGV-SCPYICGKYLDHGV 529
            WSF+A   +EG + + TG LVSLSEQ+++DC          +   GC GG +N A+++I+   GV  E++YPY     G+C  +    +A ++ +S +  ++++     V + P+A  I+A    Q Y GGV S P  CG  L+H +
Sbjct:  148 WSFAAIATVEGIYKIKTGYLVSLSEQEVLDC----------AVSYGCKGGWVNKAYDFIISNNGVTTEENYPYLAYQ-GTCNANSFPNSAYITGYSYVRRNDERSMMYAVSNQPIAALIDASENFQYYNGGVFSGP--CGTSLNHAI 281          

HSP 2 Score: 39.6614 bits (91), Expect = 1.527e-21
Identity = 15/25 (60.00%), Postives = 18/25 (72.00%), Query Frame = 1
Query:   19 LPTDFDWRDHGAVTGVKDQGACGSC 93
            +P   DWRD+GAV  VK+Q  CGSC
Sbjct:  123 VPQSIDWRDYGAVNEVKNQNPCGSC 147          
The following BLAST results are available for this feature:
BLAST of CF503892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CATV_NPVLD1.429e-2232.70Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CPR4_ARATH2.418e-2233.11Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CATQ_RAT2.421e-2233.78Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
CATV_NPVCD2.424e-2232.69Viral cathepsin OS=Choristoneura fumiferana defect... [more]
TEST2_MOUSE3.152e-2236.08Testin-2 OS=Mus musculus PE=2 SV=1[more]
CYSP3_SOLLC4.096e-2236.65Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CATH_BOVIN5.335e-2238.51Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
CATV_NPVEP6.946e-2233.33Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
CFAD_DICDI8.954e-2237.41Counting factor associated protein D OS=Dictyostel... [more]
BROM1_ANACO1.527e-2134.01Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-379 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503892 ID=CF503892; Name=CF503892; organism=Citrus sinensis; type=EST; length=532bp
ATTCTCCCCACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACGG
CGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCCTGGTCG
TTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGA
GCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTG
ATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATG
AACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAGAA
GGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAAAA
GCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATGAA
GATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGTAT
CAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCATACA
TTTGCGGGAAGTATTTGGATCATGGAGTGCTT
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