CF503921
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503921 vs. ExPASy Swiss-Prot
Match: SPEA_CHRVO (Biosynthetic arginine decarboxylase OS=Chromobacterium violaceum GN=speA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 4.577e-21 Identity = 51/113 (45.13%), Postives = 70/113 (61.95%), Query Frame = 3 Query: 129 YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDG 458 Y N S+F S+PD WAI Q+ PI+P+H L E+P R VL DLTCDSDGK+ +++ +S+ +HE+ G Y + +FL GAY+E LG +HNLFG V V +G Sbjct: 454 YFCNFSVFQSLPDTWAIDQVLPIMPVHRLAEQPTRRAVLQDLTCDSDGKLKQYVDQQSIESSMSVHEVKQG-----DEYLIAVFLVGAYQEILGDMHNLFGDTDSVNVYVREG 561
BLAST of CF503921 vs. ExPASy Swiss-Prot
Match: SPEA_PASMU (Biosynthetic arginine decarboxylase OS=Pasteurella multocida GN=speA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.978e-21 Identity = 63/170 (37.06%), Postives = 90/170 (52.94%), Query Frame = 3 Query: 27 QFKDGTLGIEQLATVDGLCDFVAKEIGA--SDPVRTY---------------HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGGG---TSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAV 476 Q+ G L +EQ A + L + E+G ++ R++ +VN S+F S+PD W I QLFP+ PI +L++ R VL D+TCDSDG ID +I G T++P+ E P LG F+ GAY+E LG +HNLFG S V VL + ++ V Sbjct: 420 QYNVGLLNLEQRAWAEQLYLNICHEVGQLFNEKHRSHRTIIDELQERFADKLYVNFSLFQSLPDAWGIDQLFPVCPISNLNQPVSRRAVLLDITCDSDGTIDHYIDGDGITTTMPMPHY-----EEDNPPLLGFFMVGAYQEILGNMHNLFGDTSTVDVLVHEQDKAYIV 584
BLAST of CF503921 vs. ExPASy Swiss-Prot
Match: SPEA_SHELP (Biosynthetic arginine decarboxylase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=speA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 7.807e-21 Identity = 51/114 (44.74%), Postives = 71/114 (62.28%), Query Frame = 3 Query: 129 YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGP-SVVRVLQSDG 458 + VN S+F S+PD W I Q+FP++P+ LD++P R V+ D+TCDSDG +D+++ G T+LP+ PY +G FL GAY+E LG +HNLFG S V L DG Sbjct: 464 FFVNFSLFQSLPDAWGIDQVFPVMPLSGLDKKPERRAVMLDITCDSDGTVDQYVDGQGIETTLPV-----PAWSAESPYLIGFFLVGAYQEILGDMHNLFGDTNSAVVRLDDDG 572
BLAST of CF503921 vs. ExPASy Swiss-Prot
Match: SPEA_ALHEH (Biosynthetic arginine decarboxylase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=speA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 7.807e-21 Identity = 59/128 (46.09%), Postives = 77/128 (60.16%), Query Frame = 3 Query: 138 NLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFI---GGGTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV-LQSDGPHSFAVTRAMPGPSCGD 509 N S+F S+PD WAI Q+FP++P+ LDE P R VL DLTCDSDG I ++ G ++LPL G PY LG+FL GAY+E LG +HNLFG V V L +G +A++ A G + D Sbjct: 459 NFSLFQSMPDVWAIDQIFPVLPLQRLDEPPASRAVLQDLTCDSDGCIRGYVDRDGVESTLPLPPWRPG-----EPYLLGIFLVGAYQEILGDMHNLFGDTHSVNVRLTGEG---YALSGAAHGDTITD 578
BLAST of CF503921 vs. ExPASy Swiss-Prot
Match: SPEA_TOLAT (Biosynthetic arginine decarboxylase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=speA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.020e-20 Identity = 51/110 (46.36%), Postives = 68/110 (61.82%), Query Frame = 3 Query: 135 VNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSD 455 VN S+F S+PD W I Q+FPI+P+ LD++P RGV+ D+TCDSDG I +++ G SLP+ EM Y+G FL GAY+E LG +HNLFG V +D Sbjct: 464 VNFSLFQSLPDAWGIDQIFPIMPLSGLDQQPTRRGVIMDITCDSDGMIKEYVDGVGIENSLPMPEMRNDETN-----YMGFFLVGAYQEILGDLHNLFGDTHSAEVCLND 568
BLAST of CF503921 vs. ExPASy Swiss-Prot
Match: SPEA_SHEWM (Biosynthetic arginine decarboxylase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=speA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.020e-20 Identity = 53/114 (46.49%), Postives = 70/114 (61.40%), Query Frame = 3 Query: 129 YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGP-SVVRVLQSDG 458 + VN S+F S+PD W I Q+FPI+P+ LD+ P R V+ D+TCDSDG ID+++ G T+LP+ PY +G FL GAY+E LG +HNLFG S V L DG Sbjct: 464 FFVNFSLFQSLPDAWGIDQVFPIMPLSGLDKAPERRAVMLDITCDSDGTIDQYVDGQGIETTLPV-----PAWSAESPYLIGFFLVGAYQEILGDMHNLFGDTNSAVIRLDDDG 572
BLAST of CF503921 vs. ExPASy Swiss-Prot
Match: SPEA_SHEHH (Biosynthetic arginine decarboxylase OS=Shewanella halifaxensis (strain HAW-EB4) GN=speA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.020e-20 Identity = 50/110 (45.45%), Postives = 71/110 (64.55%), Query Frame = 3 Query: 129 YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFG--GPSVVRV 443 + VN S+F S+PD W I Q+FP++P+ LD+ P R V+ D+TCDSDG ID+++ G T+LP+ + PY +G FL GAY+E LG +HNLFG +VVR+ Sbjct: 464 FFVNFSLFQSLPDAWGIDQVFPVMPLSGLDKAPESRAVMLDITCDSDGTIDQYVDGQGIETTLPVPAWT-----QESPYLIGFFLVGAYQEILGDMHNLFGDTNSAVVRL 568
BLAST of CF503921 vs. ExPASy Swiss-Prot
Match: SPEA_SHIFL (Biosynthetic arginine decarboxylase OS=Shigella flexneri GN=speA PE=3 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 1.332e-20 Identity = 51/107 (47.66%), Postives = 66/107 (61.68%), Query Frame = 3 Query: 132 HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV 443 +VN S+F S+PD W I QLFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E P LG F+ GAY+E LG +HNLFG V V Sbjct: 486 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPEY-----DPENPPMLGFFMVGAYQEILGNMHNLFGDTEAVDV 587
BLAST of CF503921 vs. ExPASy Swiss-Prot
Match: SPEA_SHIF8 (Biosynthetic arginine decarboxylase OS=Shigella flexneri serotype 5b (strain 8401) GN=speA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.332e-20 Identity = 51/107 (47.66%), Postives = 66/107 (61.68%), Query Frame = 3 Query: 132 HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRV 443 +VN S+F S+PD W I QLFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E P LG F+ GAY+E LG +HNLFG V V Sbjct: 460 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPEY-----DPENPPMLGFFMVGAYQEILGNMHNLFGDTEAVDV 561
BLAST of CF503921 vs. ExPASy Swiss-Prot
Match: SPEA_SHEPW (Biosynthetic arginine decarboxylase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=speA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.332e-20 Identity = 50/110 (45.45%), Postives = 71/110 (64.55%), Query Frame = 3 Query: 129 YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFG--GPSVVRV 443 + VN S+F S+PD W I Q+FP++P+ LD+ P R V+ D+TCDSDG +D+++ G T+LP+ + PY +G FL GAY+E LG +HNLFG +VVRV Sbjct: 464 FFVNFSLFQSLPDAWGIDQVFPVMPLSGLDKAPERRAVMLDITCDSDGIVDQYVDGQGIETTLPVPAWT-----QESPYLIGFFLVGAYQEILGDMHNLFGDTNSAVVRV 568 The following BLAST results are available for this feature:
BLAST of CF503921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 102
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503921 ID=CF503921; Name=CF503921; organism=Citrus sinensis; type=EST; length=509bpback to top |