CF503993

Overview
NameCF503993
Unique NameCF503993
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length483
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF503993 vs. ExPASy Swiss-Prot
Match: STRD_STRGR (Glucose-1-phosphate thymidylyltransferase OS=Streptomyces griseus GN=strD PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.529e-12
Identity = 36/100 (36.00%), Postives = 65/100 (65.00%), Query Frame = 3 
Query:  150 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDD 449
            MKAL+L GG GTRLRP+T +  K LV  ANKP++ + +EA++A G+ +V + +    + ++  + +  ++ G+K+    +++PLG A  + ++RD L +D
Sbjct:    1 MKALVLAGGTGTRLRPITHTSAKQLVPVANKPVLFYGLEAIRAAGIIDVGIVVGDTADEIVAAVGD-GSRFGLKVSYIPQSKPLGLAHCVLISRDFLGED 99
The following BLAST results are available for this feature:
BLAST of CF503993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
STRD_STRGR7.529e-1236.00Glucose-1-phosphate thymidylyltransferase OS=Strep... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-481 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503993 ID=CF503993; Name=CF503993; organism=Citrus sinensis; type=EST; length=483bp
CAAAGCAAAAGCGAAGCGCGCGAAGCTCGCCTCATCCGTTGACTGAGCTG
TCGGTCCCGAGTCACGACTCGCGACTCTTGTTTTTCAACTCAGTTGTTTG
CCGTTCGGATCCGGTCTTAATTAAAGGATAAAGCAGGCTCCGTATCACAA
TGAAGGCACTTATTCTTGTTGGAGGGTTCGGAACACGGTTGAGGCCGTTG
ACGCTTAGTGTCCCTAAGCCACTTGTTGAATTTGCTAACAAACCCATGAT
CCTGCATCAGATAGAGGCCCTTAAGGCAGTTGGAGTGACTGAAGTAGTTT
TGGCTATTAACTACCAGCCAGAGGTGATGTTGAACTTTTTGAAGGAATTT
GAAGCAAAGCTTGGGATCAAGATCATCTGCTCACAAGAGACTGAGCCACT
GGGCACTGCTGGTCCTCTGGCTCTGGCTAGAGACAAATTGATTGACGATA
CTGGTGAGCCATTTTTCGTCCTTAACAGTGATG
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