CF504010
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504010 vs. ExPASy Swiss-Prot
Match: KTNB1_HUMAN (Katanin p80 WD40-containing subunit B1 OS=Homo sapiens GN=KATNB1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.811e-12 Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 3 Query: 21 IVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 329 + S S+D IKLW+ + C + + H++ V C+RFSP+ + SA+ D TVK+W+L+ K+ + GHTG VN V P+ L ASG D I WDL Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYR---GHSQAVRCLRFSPDG--KWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
BLAST of CF504010 vs. ExPASy Swiss-Prot
Match: WD51A_HUMAN (WD repeat-containing protein 51A OS=Homo sapiens GN=WDR51A PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 2.365e-12 Identity = 39/107 (36.45%), Postives = 60/107 (56.07%), Query Frame = 3 Query: 9 DNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 329 D + V+AS D+T+K+W T + K+ H WV C +FSP+ IVSAS D+TVK+W+ S+ + + H G+V V P G+ A+ G D + +WD+ Sbjct: 114 DGQSFVTASDDKTVKVWATHRQ-KFLFSLSQ-HINWVRCAKFSPDGR--LIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 216 HSP 2 Score: 65.4698 bits (158), Expect = 9.935e-11 Identity = 42/117 (35.90%), Postives = 62/117 (52.99%), Query Frame = 3 Query: 3 SIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLY 350 S D R IVSAS D+T+KLW+ EC ++ E H +V+ V F P+ I +A D TVKVW++ +L H+ VN ++ P G+ + D + + DL EG+ LY Sbjct: 154 SPDGRLIVSASDDKTVKLWDKSSRECVHSYCE---HGGFVTYVDFHPSGT--CIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLY 265
BLAST of CF504010 vs. ExPASy Swiss-Prot
Match: WD51A_BOVIN (WD repeat-containing protein 51A OS=Bos taurus GN=WDR51A PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.365e-12 Identity = 38/107 (35.51%), Postives = 61/107 (57.01%), Query Frame = 3 Query: 9 DNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 329 D + V+AS D+T+K+W+T + K+ H WV C +FSP+ IVSAS D+TVK+W+ ++ + + H G+V V P G+ A+ G D + +WD+ Sbjct: 114 DGQSFVTASDDKTVKVWSTHRQ-KFLFSLSQ-HINWVRCAKFSPDGR--LIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 216 HSP 2 Score: 68.1662 bits (165), Expect = 1.533e-11 Identity = 43/117 (36.75%), Postives = 63/117 (53.85%), Query Frame = 3 Query: 3 SIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLY 350 S D R IVSAS D+T+KLW+ T EC ++ E H +V+ V F P+ I +A D TVKVW++ +L H+ VN ++ P G+ + D + + DL EG+ LY Sbjct: 154 SPDGRLIVSASDDKTVKLWDKTSRECVHSYCE---HGGFVTYVDFHPSGT--CIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLY 265
BLAST of CF504010 vs. ExPASy Swiss-Prot
Match: TAF5_YEAST (Transcription initiation factor TFIID subunit 5 OS=Saccharomyces cerevisiae GN=TAF5 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.365e-12 Identity = 38/107 (35.51%), Postives = 60/107 (56.07%), Query Frame = 3 Query: 27 SASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL 347 +AS D+T +LW+ + Y ++ H V CV F PN + + S D+T ++W++S GHT V ++AV PDG ++G +DG+I +WD+ GKRL Sbjct: 584 TASHDQTARLWSC--DHIYPLRIFAGHLNDVDCVSFHPNGCY--VFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRL 686
BLAST of CF504010 vs. ExPASy Swiss-Prot
Match: WDR5_DICDI (WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum GN=wdr5 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.088e-12 Identity = 40/114 (35.09%), Postives = 67/114 (58.77%), Query Frame = 3 Query: 3 SIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK 341 S D + + SAS D+TIK+W G+ + T++ H E +S + +S ++ I SAS D+T+K+W++ + K+ TL GH YV V+ +P +L SG D + +WD+ G+ Sbjct: 55 SPDGKWLASASADKTIKIWGAYDGKFERTLE---GHKEGISDIAWSQDS--KLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGE 163 HSP 2 Score: 69.707 bits (169), Expect = 5.268e-12 Identity = 39/115 (33.91%), Postives = 64/115 (55.65%), Query Frame = 3 Query: 3 SIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL 347 S D++ I SAS D+TIK+W+ E ++ H E+V V F+P + IVS S+D V++W+++ + ++ H+ V V + DG+L SG DG + +WD G+ L Sbjct: 97 SQDSKLICSASDDKTIKIWDV--ESGKMVKTLKGHKEYVFGVSFNPQS--NLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLL 207
BLAST of CF504010 vs. ExPASy Swiss-Prot
Match: WDR48_DROMO (WD repeat-containing protein 48 homolog OS=Drosophila mojavensis GN=GI19644 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.088e-12 Identity = 43/109 (39.45%), Postives = 58/109 (53.21%), Query Frame = 3 Query: 9 DNRQIVSASRDRTIKLWNTLGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 329 +N ++ SA RD I++WNT E KY IQ + H +WV+ + N ++SAS D TVKVWN +TL H YV +A + D AS G D I LWD+ Sbjct: 39 NNGKLYSAGRDAIIRVWNTRTEANEKY-IQSMEHHNDWVNDIVLCCNGRN--LISASCDTTVKVWNAHKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDV 144
BLAST of CF504010 vs. ExPASy Swiss-Prot
Match: WDR48_DROAN (WD repeat-containing protein 48 homolog OS=Drosophila ananassae GN=GF12420 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.088e-12 Identity = 43/109 (39.45%), Postives = 58/109 (53.21%), Query Frame = 3 Query: 9 DNRQIVSASRDRTIKLWNTLGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 329 +N ++ SA RD I++WNT E KY IQ + H +WV+ + N ++SAS D TVKVWN +TL H YV +A + D AS G D I LWD+ Sbjct: 39 NNGKLYSAGRDAIIRVWNTRTESNEKY-IQSMEHHNDWVNDIVLCCNGRN--LISASCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDV 144
BLAST of CF504010 vs. ExPASy Swiss-Prot
Match: WDR48_DROVI (WD repeat-containing protein 48 homolog OS=Drosophila virilis GN=GJ15009 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.033e-12 Identity = 43/109 (39.45%), Postives = 58/109 (53.21%), Query Frame = 3 Query: 9 DNRQIVSASRDRTIKLWNTLGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 329 +N ++ SA RD I++WNT E KY IQ + H +WV+ + N ++SAS D TVKVWN +TL H YV +A + D AS G D I LWD+ Sbjct: 39 NNGKLYSAGRDAIIRVWNTRTESNDKY-IQSMEHHNDWVNDIVLCCNGRN--LISASCDTTVKVWNAHKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDV 144
BLAST of CF504010 vs. ExPASy Swiss-Prot
Match: WDR48_DROGR (WD repeat-containing protein 48 homolog OS=Drosophila grimshawi GN=GH21936 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.033e-12 Identity = 43/109 (39.45%), Postives = 58/109 (53.21%), Query Frame = 3 Query: 9 DNRQIVSASRDRTIKLWNTLGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 329 +N ++ SA RD I++WNT E KY IQ + H +WV+ + N ++SAS D TVKVWN +TL H YV +A + D AS G D I LWD+ Sbjct: 39 NNGKLYSAGRDAIIRVWNTRTESNEKY-IQSMEHHNDWVNDIVLCCNGRN--LISASCDTTVKVWNAHKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDV 144
BLAST of CF504010 vs. ExPASy Swiss-Prot
Match: WD51A_MOUSE (WD repeat-containing protein 51A OS=Mus musculus GN=Wdr51a PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 4.033e-12 Identity = 37/107 (34.58%), Postives = 63/107 (58.88%), Query Frame = 3 Query: 9 DNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWD 326 D + +V+AS D+T+K+W+T + +++ + H WV C +FSP+ IVSAS D+TVK+W+ ++ + + H G+V V P G+ A+ G D + +WD Sbjct: 114 DGQSLVTASDDKTVKVWSTHRQRFLFSLTQ---HINWVRCAKFSPDGR--LIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD 215 HSP 2 Score: 66.6254 bits (161), Expect = 4.460e-11 Identity = 43/117 (36.75%), Postives = 62/117 (52.99%), Query Frame = 3 Query: 3 SIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLY 350 S D R IVSAS D+T+KLW+ T EC ++ E H +V+ V F P+ I +A D TVKVW+ +L H+ VN ++ P G+ + D + + DL EG+ LY Sbjct: 154 SPDGRLIVSASDDKTVKLWDKTSRECIHSYCE---HGGFVTYVDFHPSGT--CIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLY 265 The following BLAST results are available for this feature:
BLAST of CF504010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504010 ID=CF504010; Name=CF504010; organism=Citrus sinensis; type=EST; length=351bpback to top |