CF504010
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504010 vs. ExPASy Swiss-Prot
Match: KTNB1_CHICK (Katanin p80 WD40-containing subunit B1 OS=Gallus gallus GN=KATNB1 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 4.033e-12 Identity = 42/103 (40.78%), Postives = 56/103 (54.37%), Query Frame = 3 Query: 21 IVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 329 + S S D IKLW+ K I + +HT+ V C+RFSP+ + SA+ D TVK+W+L+ K+ GH+G VN V P L ASG D I WDL Sbjct: 120 VASGSLDTDIKLWDV--RRKGCIFKYKSHTQAVRCLRFSPDG--KWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDL 218
BLAST of CF504010 vs. ExPASy Swiss-Prot
Match: APAF_MOUSE (Apoptotic protease-activating factor 1 OS=Mus musculus GN=Apaf1 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 4.033e-12 Identity = 38/110 (34.55%), Postives = 62/110 (56.36%), Query Frame = 3 Query: 3 SIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 329 S D+ I + S D+ +K+W++ G+ +T E H+E V+C F+ ++ + + S D +K+W+L+ + R T+ GHT VN SPD L AS DG + LWD+ Sbjct: 666 SSDDSYIATCSADKKVKIWDSATGKLVHTYDE---HSEQVNCCHFTNSSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDV 772
BLAST of CF504010 vs. ExPASy Swiss-Prot
Match: COB21_ARATH (Coatomer subunit beta'-1 OS=Arabidopsis thaliana GN=At1g79990 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 5.268e-12 Identity = 39/107 (36.45%), Postives = 59/107 (55.14%), Query Frame = 3 Query: 9 DNRQIVSASRDRTIKLWNTLG--ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLW 323 D SAS DRTIK+WN LG + +T+ DAH + V+CV + +P +++ S D T KVW+ TL GHT V+ V+ P+ + +G +DG + +W Sbjct: 154 DTNTFASASLDRTIKIWN-LGSPDPNFTL---DAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
BLAST of CF504010 vs. ExPASy Swiss-Prot
Match: YZLL_CAEEL (Uncharacterized WD repeat-containing protein K04G11.4 OS=Caenorhabditis elegans GN=K04G11.4 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.880e-12 Identity = 38/113 (33.63%), Postives = 64/113 (56.64%), Query Frame = 3 Query: 3 SIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEG 338 S D++ IVS S D+ +K+++ + G C T++ HT +V C F+P+ I S S+D T+++W N ++ GH V++V + DG+ ASG DG++ +WD G Sbjct: 157 SSDSKLIVSCSDDKLVKVFDVSSGRCVKTLK---GHTNYVFCCCFNPSGT--LIASGSFDETIRIWCARNGNTIFSIPGHEDPVSSVCFNRDGAYLASGSYDGIVRIWDSTTG 264
BLAST of CF504010 vs. ExPASy Swiss-Prot
Match: WDR48_DROYA (WD repeat-containing protein 48 homolog OS=Drosophila yakuba GN=GE13034 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.880e-12 Identity = 42/109 (38.53%), Postives = 58/109 (53.21%), Query Frame = 3 Query: 9 DNRQIVSASRDRTIKLWNTLGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 329 +N ++ SA RD I++WNT + KY IQ + H +WV+ + N ++SAS D TVKVWN +TL H YV +A + D AS G D I LWD+ Sbjct: 39 NNGKLYSAGRDAIIRVWNTRTDSSEKY-IQSMEHHNDWVNDIVLCCNGRN--LISASCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDV 144
BLAST of CF504010 vs. ExPASy Swiss-Prot
Match: WDR48_DROSI (WD repeat-containing protein 48 homolog OS=Drosophila simulans GN=GD25924 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.880e-12 Identity = 42/109 (38.53%), Postives = 58/109 (53.21%), Query Frame = 3 Query: 9 DNRQIVSASRDRTIKLWNTLGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 329 +N ++ SA RD I++WNT + KY IQ + H +WV+ + N ++SAS D TVKVWN +TL H YV +A + D AS G D I LWD+ Sbjct: 39 NNGKLYSAGRDAIIRVWNTRTDSSEKY-IQSMEHHNDWVNDIVLCCNGRN--LISASCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDV 144
BLAST of CF504010 vs. ExPASy Swiss-Prot
Match: WDR48_DROSE (WD repeat-containing protein 48 homolog OS=Drosophila sechellia GN=GM20456 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.880e-12 Identity = 42/109 (38.53%), Postives = 58/109 (53.21%), Query Frame = 3 Query: 9 DNRQIVSASRDRTIKLWNTLGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 329 +N ++ SA RD I++WNT + KY IQ + H +WV+ + N ++SAS D TVKVWN +TL H YV +A + D AS G D I LWD+ Sbjct: 39 NNGKLYSAGRDAIIRVWNTRTDSSEKY-IQSMEHHNDWVNDIVLCCNGRN--LISASCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDV 144
BLAST of CF504010 vs. ExPASy Swiss-Prot
Match: WDR48_DROME (WD repeat-containing protein 48 homolog OS=Drosophila melanogaster GN=CG9062 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.880e-12 Identity = 42/109 (38.53%), Postives = 58/109 (53.21%), Query Frame = 3 Query: 9 DNRQIVSASRDRTIKLWNTLGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 329 +N ++ SA RD I++WNT + KY IQ + H +WV+ + N ++SAS D TVKVWN +TL H YV +A + D AS G D I LWD+ Sbjct: 39 NNGKLYSAGRDAIIRVWNTRTDSSEKY-IQSMEHHNDWVNDIVLCCNGRN--LISASCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDV 144
BLAST of CF504010 vs. ExPASy Swiss-Prot
Match: WDR48_DROER (WD repeat-containing protein 48 homolog OS=Drosophila erecta GN=GG22678 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.880e-12 Identity = 42/109 (38.53%), Postives = 58/109 (53.21%), Query Frame = 3 Query: 9 DNRQIVSASRDRTIKLWNTLGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 329 +N ++ SA RD I++WNT + KY IQ + H +WV+ + N ++SAS D TVKVWN +TL H YV +A + D AS G D I LWD+ Sbjct: 39 NNGKLYSAGRDAIIRVWNTRTDSSEKY-IQSMEHHNDWVNDIVLCCNGRN--LISASCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDV 144
BLAST of CF504010 vs. ExPASy Swiss-Prot
Match: TAF5_HUMAN (Transcription initiation factor TFIID subunit 5 OS=Homo sapiens GN=TAF5 PE=1 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 6.880e-12 Identity = 38/105 (36.19%), Postives = 55/105 (52.38%), Query Frame = 3 Query: 24 VSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEG 338 VS DR +LW T I G H V+C RF PN+ + + S DRTV++W++ N GH G ++++ SP+G A+G DG +LLWD+ G Sbjct: 601 VSGGHDRVARLWATDHYQPLRIFAG--HLADVNCTRFHPNSNY--VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHG 701 The following BLAST results are available for this feature:
BLAST of CF504010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504010 ID=CF504010; Name=CF504010; organism=Citrus sinensis; type=EST; length=351bpback to top |