CF504016
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_YERPG (Bifunctional polymyxin resistance protein arnA OS=Yersinia pestis bv. Antiqua (strain Angola) GN=arnA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.789e-13 Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = 3 Query: 105 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ED S I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 446 EDTSRLIVGPINKQRWIYSVSKQLLDRVIWAYGVKEGLKFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_YERPE (Bifunctional polymyxin resistance protein arnA OS=Yersinia pestis GN=arnA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.789e-13 Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = 3 Query: 105 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ED S I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 446 EDTSRLIVGPINKQRWIYSVSKQLLDRVIWAYGVKEGLKFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_YERPB (Bifunctional polymyxin resistance protein arnA OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=arnA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.789e-13 Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = 3 Query: 105 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ED S I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 446 EDTSRLIVGPINKQRWIYSVSKQLLDRVIWAYGVKEGLKFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_YERPA (Bifunctional polymyxin resistance protein arnA OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=arnA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.789e-13 Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = 3 Query: 105 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ED S I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 446 EDTSRLIVGPINKQRWIYSVSKQLLDRVIWAYGVKEGLKFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_YERP3 (Bifunctional polymyxin resistance protein arnA OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=arnA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.789e-13 Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = 3 Query: 105 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ED S I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 446 EDTSRLIVGPINKQRWIYSVSKQLLDRVIWAYGVKEGLKFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_ENT38 (Bifunctional polymyxin resistance protein arnA OS=Enterobacter sp. (strain 638) GN=arnA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.789e-13 Identity = 38/82 (46.34%), Postives = 50/82 (60.98%), Query Frame = 3 Query: 21 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 C Y K I P S + + V ED S I G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D Sbjct: 420 CVKYQKRI--IFPSTSEVYGMCSDKVFDEDHSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_YERE8 (Bifunctional polymyxin resistance protein arnA OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=arnA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.643e-13 Identity = 31/54 (57.41%), Postives = 43/54 (79.63%), Query Frame = 3 Query: 105 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ED+S I G I KQRW Y+ +KQL++R+I+A GA+ L+FT+ RPFNW+GPR+D Sbjct: 446 EDSSRLIVGPINKQRWIYSVSKQLLDRVIWAYGAKENLKFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_SHESH (Bifunctional polymyxin resistance protein arnA OS=Shewanella sediminis (strain HAW-EB3) GN=arnA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.643e-13 Identity = 30/54 (55.56%), Postives = 43/54 (79.63%), Query Frame = 3 Query: 105 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ED SP I G I +QRW Y+ +KQL++R+I+A G ++ L+FT+ RPFNW+GPR+D Sbjct: 448 EDTSPLITGPINRQRWIYSTSKQLLDRVIWAYGKKDNLKFTLFRPFNWMGPRLD 501
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_ERWT9 (Bifunctional polymyxin resistance protein arnA OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=arnA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.643e-13 Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = 3 Query: 3 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 +I ST EVYG T SF ED+S + G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D Sbjct: 427 IIFPSTSEVYGMCTDASF----------------DEDSSNLVVGPINKQRWIYSVSKQLLDRVIWAYGDKEGLRFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_AERHH (Bifunctional polymyxin resistance protein arnA OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=arnA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.643e-13 Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = 3 Query: 105 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ED+S I G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D Sbjct: 448 EDSSRLIVGPINKQRWIYSVSKQLLDRVIWAYGKKEGLNFTLFRPFNWMGPRLD 501 The following BLAST results are available for this feature:
BLAST of CF504016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504016 ID=CF504016; Name=CF504016; organism=Citrus sinensis; type=EST; length=323bpback to top |