CF504016
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_SHIDS (Bifunctional polymyxin resistance protein arnA OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=arnA PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 1.808e-12 Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 3 Query: 3 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 +I ST EVYG + ED S I G + K RW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 427 IIFPSTSEVYGMCSDKYFD---------------EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_SHIBS (Bifunctional polymyxin resistance protein arnA OS=Shigella boydii serotype 4 (strain Sb227) GN=arnA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.808e-12 Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 3 Query: 3 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 +I ST EVYG + ED S I G + K RW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 427 IIFPSTSEVYGMCSDKYFD---------------EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_SHIB3 (Putative bifunctional polymyxin resistance protein arnA OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=arnA PE=5 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.808e-12 Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 3 Query: 3 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 +I ST EVYG + ED S I G + K RW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 293 IIFPSTSEVYGMCSDKYFD---------------EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 365
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_PSEU2 (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas syringae pv. syringae (strain B728a) GN=arnA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.808e-12 Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 3 Query: 15 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ST EVYG + QD + ED S I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 435 STSEVYG------------MCQDANF---NEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLD 502
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_PSEF5 (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=arnA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.808e-12 Identity = 40/84 (47.62%), Postives = 52/84 (61.90%), Query Frame = 3 Query: 15 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ST EVYG + QD + ED S I G I KQRW Y+ +KQL++R+I+A GA+ GL FT+ RPFNW+GPR+D Sbjct: 434 STSEVYG------------MCQDKNF---DEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGAK-GLNFTLFRPFNWMGPRLD 501
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_ECOUT (Bifunctional polymyxin resistance protein arnA OS=Escherichia coli (strain UTI89 / UPEC) GN=arnA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.808e-12 Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 3 Query: 3 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 +I ST EVYG + ED S I G + K RW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 427 IIFPSTSEVYGMCSDKYFD---------------EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_ECOSM (Bifunctional polymyxin resistance protein arnA OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=arnA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.808e-12 Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 3 Query: 3 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 +I ST EVYG + ED S I G + K RW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 427 IIFPSTSEVYGMCSDKYFD---------------EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_ECOSE (Bifunctional polymyxin resistance protein arnA OS=Escherichia coli (strain SE11) GN=arnA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.808e-12 Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 3 Query: 3 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 +I ST EVYG + ED S I G + K RW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 427 IIFPSTSEVYGMCSDKYFD---------------EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_ECOLU (Bifunctional polymyxin resistance protein arnA OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=arnA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.808e-12 Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 3 Query: 3 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 +I ST EVYG + ED S I G + K RW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 427 IIFPSTSEVYGMCSDKYFD---------------EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_ECOLI (Bifunctional polymyxin resistance protein arnA OS=Escherichia coli (strain K12) GN=arnA PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.808e-12 Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 3 Query: 3 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 +I ST EVYG + ED S I G + K RW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 427 IIFPSTSEVYGMCSDKYFD---------------EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD 499 The following BLAST results are available for this feature:
BLAST of CF504016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504016 ID=CF504016; Name=CF504016; organism=Citrus sinensis; type=EST; length=323bpback to top |