CF504016
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_PSEFS (Bifunctional polymyxin resistance protein arnA OS=Pseudomonas fluorescens (strain SBW25) GN=arnA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.084e-12 Identity = 38/84 (45.24%), Postives = 52/84 (61.90%), Query Frame = 3 Query: 15 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ST EVYG + QD + ED S + G + KQRW Y+ +KQL++R+I+A GA+ GL FT+ RPFNW+GPR+D Sbjct: 434 STSEVYG------------MCQDQYF---DEDTSNLVVGPVNKQRWIYSVSKQLLDRVIWAYGAK-GLNFTLFRPFNWMGPRLD 501
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_WIGBR (Bifunctional polymyxin resistance protein arnA OS=Wigglesworthia glossinidia brevipalpis GN=arnA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.028e-12 Identity = 38/88 (43.18%), Postives = 52/88 (59.09%), Query Frame = 3 Query: 3 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 +I ST EVYG + KD E+ S + G+I+ QRW Y+ +KQL++R+I+A G +N L FTI RPFNWIGP +D Sbjct: 426 IIFPSTSEVYG------MCKDD---------YFDEENSNLVTGAIKNQRWIYSSSKQLLDRIIWAYGVKNNLNFTIFRPFNWIGPGLD 498
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_KLEP3 (Bifunctional polymyxin resistance protein arnA OS=Klebsiella pneumoniae (strain 342) GN=arnA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.870e-12 Identity = 29/54 (53.70%), Postives = 41/54 (75.93%), Query Frame = 3 Query: 105 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ED S + G I KQRW Y+ +KQL++R+I+A G + L+FT+ RPFNW+GPR+D Sbjct: 446 EDTSNLVVGPINKQRWIYSVSKQLLDRVIWAYGDKYDLKFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_SHIFL (Bifunctional polymyxin resistance protein arnA OS=Shigella flexneri GN=arnA PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 1.172e-11 Identity = 35/88 (39.77%), Postives = 49/88 (55.68%), Query Frame = 3 Query: 3 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 +I ST EVYG + ED S I G + K RW Y+ +KQL++R+I+A G + GL+FT+ PFNW+GPR+D Sbjct: 427 IIFPSTSEVYGMCSDKYFD---------------EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFLPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_SHIF8 (Bifunctional polymyxin resistance protein arnA OS=Shigella flexneri serotype 5b (strain 8401) GN=arnA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.172e-11 Identity = 35/88 (39.77%), Postives = 49/88 (55.68%), Query Frame = 3 Query: 3 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 +I ST EVYG + ED S I G + K RW Y+ +KQL++R+I+A G + GL+FT+ PFNW+GPR+D Sbjct: 427 IIFPSTSEVYGMCSDKYFD---------------EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFLPFNWMGPRLD 499 The following BLAST results are available for this feature:
BLAST of CF504016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504016 ID=CF504016; Name=CF504016; organism=Citrus sinensis; type=EST; length=323bpback to top |